Clone Name | bastl53h01 |
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Clone Library Name | barley_pub |
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 54.3 bits (129), Expect = 1e-07 Identities = 23/28 (82%), Positives = 25/28 (89%) Frame = +2 Query: 377 PSWAYGLGSMGSISVSYGEDGPVFCGLS 460 P WA GLGSM SI+VSYGEDGPVFCGL+ Sbjct: 19 PGWACGLGSMSSIAVSYGEDGPVFCGLN 46
>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)| Length = 892 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +2 Query: 101 PAAPHPDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTPMS--AGIRGKGDD 253 P+ P P C ++ + + P VH SPH P AT P S + G+GDD Sbjct: 450 PSLPRPPG---CPAQQGGSAPIDPPPVHESPHPPLPATEPASRLSSEEGEGDD 499
>SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (p21 Ras GTPase-activating protein-associated p62) (GAP-associated tyrosine phosphoprotein p62) (Src-associated in mitosis 68 kDa protein) (Sam68) (p68) Length = 443 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/43 (44%), Positives = 20/43 (46%) Frame = +2 Query: 92 SSQPAAPHPDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTP 220 S QP PH SRG AR+ PA P PPSAT P Sbjct: 35 SRQPPLPHRSRGGGGGSRGGARAS---PATQPPPLLPPSATGP 74
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -3 Query: 371 RLGSRERELEHCPFLEARS*CRRDSFAGSAVTIAAGPPVCRR 246 R ++R LE P L A + DS G + GPP CRR Sbjct: 2060 RRDRKQRSLEKGPSLSADTDGAPDSTVGPGLPTGEGPPGCRR 2101
>MTR1L_MOUSE (O88495) Melatonin-related receptor (G protein-coupled receptor 50)| (H9) Length = 583 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +2 Query: 116 PDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTPMSAGIRGKGDDI 256 P ++ S G +S ++P SS HC P++ A + KGD + Sbjct: 399 PASIHHKSISGHPKSASVYPKPASSVHCKPASVHFKPASVHFKGDSV 445
>DLL3_XENLA (P54655) Homeobox protein DLL-3 (XDLL-3)| Length = 289 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Frame = +2 Query: 92 SSQPAAPH-PDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTPMSAGIRGKG 247 SS P A + P + + +G +RSL P VHS P PS+++P S+ + G Sbjct: 209 SSDPMACNSPQSPVVWEPQGSSRSLSHHPHVHSHPQ--PSSSSPASSYLENSG 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,483,427 Number of Sequences: 219361 Number of extensions: 1052961 Number of successful extensions: 3711 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3324 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3705 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)