>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  159 bits (80), Expect = 7e-36
 Identities = 140/160 (87%)
 Strand = Plus / Minus

                                                                            
Query: 178      ggcggcggagccatggaggaggacgccgagggcatggaccgcctcgacatggacggcgac 237
                |||||||| || |||||||||||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 26160342 ggcggcggcgcgatggaggaggacgcggaggggatggaccggttcgacatggacggcgac 26160283

                                                                            
Query: 238      ttcgtgggcggccgcttcgaccgcgacggggagttctactacaagagccgccgccagcgg 297
                |||| ||||||||| |||| | | ||||| |||||||||||| || |||||||| |||| 
Sbjct: 26160282 ttcgagggcggccggttcggcagggacggcgagttctactacgagcgccgccgcgagcgc 26160223

                                                        
Query: 298      gcgccccagacccgcgacgacgctgtctacggcgtcttcg 337
                ||||| ||||| |||||||||||  |||||||||||||||
Sbjct: 26160222 gcgccgcagacgcgcgacgacgcgctctacggcgtcttcg 26160183

>dbj|AK073946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N19, full
           insert sequence
          Length = 2778

 Score =  159 bits (80), Expect = 7e-36
 Identities = 140/160 (87%)
 Strand = Plus / Plus

                                                                       
Query: 178 ggcggcggagccatggaggaggacgccgagggcatggaccgcctcgacatggacggcgac 237
           |||||||| || |||||||||||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 57  ggcggcggcgcgatggaggaggacgcggaggggatggaccggttcgacatggacggcgac 116

                                                                       
Query: 238 ttcgtgggcggccgcttcgaccgcgacggggagttctactacaagagccgccgccagcgg 297
           |||| ||||||||| |||| | | ||||| |||||||||||| || |||||||| |||| 
Sbjct: 117 ttcgagggcggccggttcggcagggacggcgagttctactacgagcgccgccgcgagcgc 176

                                                   
Query: 298 gcgccccagacccgcgacgacgctgtctacggcgtcttcg 337
           ||||| ||||| |||||||||||  |||||||||||||||
Sbjct: 177 gcgccgcagacgcgcgacgacgcgctctacggcgtcttcg 216

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  159 bits (80), Expect = 7e-36
 Identities = 140/160 (87%)
 Strand = Plus / Minus

                                                                            
Query: 178      ggcggcggagccatggaggaggacgccgagggcatggaccgcctcgacatggacggcgac 237
                |||||||| || |||||||||||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 26088518 ggcggcggcgcgatggaggaggacgcggaggggatggaccggttcgacatggacggcgac 26088459

                                                                            
Query: 238      ttcgtgggcggccgcttcgaccgcgacggggagttctactacaagagccgccgccagcgg 297
                |||| ||||||||| |||| | | ||||| |||||||||||| || |||||||| |||| 
Sbjct: 26088458 ttcgagggcggccggttcggcagggacggcgagttctactacgagcgccgccgcgagcgc 26088399

                                                        
Query: 298      gcgccccagacccgcgacgacgctgtctacggcgtcttcg 337
                ||||| ||||| |||||||||||  |||||||||||||||
Sbjct: 26088398 gcgccgcagacgcgcgacgacgcgctctacggcgtcttcg 26088359

>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 144241

 Score =  159 bits (80), Expect = 7e-36
 Identities = 140/160 (87%)
 Strand = Plus / Minus

                                                                         
Query: 178   ggcggcggagccatggaggaggacgccgagggcatggaccgcctcgacatggacggcgac 237
             |||||||| || |||||||||||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 50580 ggcggcggcgcgatggaggaggacgcggaggggatggaccggttcgacatggacggcgac 50521

                                                                         
Query: 238   ttcgtgggcggccgcttcgaccgcgacggggagttctactacaagagccgccgccagcgg 297
             |||| ||||||||| |||| | | ||||| |||||||||||| || |||||||| |||| 
Sbjct: 50520 ttcgagggcggccggttcggcagggacggcgagttctactacgagcgccgccgcgagcgc 50461

                                                     
Query: 298   gcgccccagacccgcgacgacgctgtctacggcgtcttcg 337
             ||||| ||||| |||||||||||  |||||||||||||||
Sbjct: 50460 gcgccgcagacgcgcgacgacgcgctctacggcgtcttcg 50421

>gb|AF160731.1|AF160731 Oryza officinalis repetitive sequence
          Length = 879

 Score =  143 bits (72), Expect = 4e-31
 Identities = 138/160 (86%)
 Strand = Plus / Plus

                                                                       
Query: 178 ggcggcggagccatggaggaggacgccgagggcatggaccgcctcgacatggacggcgac 237
           |||||||| || ||||||||||| || ||||| ||||||||| |||||||||||||||||
Sbjct: 288 ggcggcggcgcgatggaggaggatgcggaggggatggaccgcttcgacatggacggcgac 347

                                                                       
Query: 238 ttcgtgggcggccgcttcgaccgcgacggggagttctactacaagagccgccgccagcgg 297
           |||| ||| || ||||||| | | ||||| |||||||||||| || |||||||| |||| 
Sbjct: 348 ttcgagggtggacgcttcggcagggacggcgagttctactacgagcgccgccgcgagcgc 407

                                                   
Query: 298 gcgccccagacccgcgacgacgctgtctacggcgtcttcg 337
           || |||||||| |||||||||||  | |||||||||||||
Sbjct: 408 gccccccagacgcgcgacgacgccctatacggcgtcttcg 447

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 303     ccagacccgcgacgacgctg 322
               ||||||||||||||||||||
Sbjct: 1466284 ccagacccgcgacgacgctg 1466303

>ref|XM_466583.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1512

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 178 ggcggcggagccatggaggaggac 201
           |||||||| |||||||||||||||
Sbjct: 847 ggcggcggcgccatggaggaggac 870

>ref|NM_184874.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 187 gccatggaggaggacgccgagggc 210
           |||||||||||||||| |||||||
Sbjct: 673 gccatggaggaggacgacgagggc 696

>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003G23, complete sequence
          Length = 135931

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   gccatggaggaggacgccgagggc 210
             |||||||||||||||| |||||||
Sbjct: 72935 gccatggaggaggacgacgagggc 72958

>ref|XM_954838.1| Neurospora crassa OR74A hypothetical protein (NCU02287.1) partial
            mRNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  gggcggcaaggtcgagaggc 180
            ||||||||||||||||||||
Sbjct: 1509 gggcggcaaggtcgagaggc 1528

>ref|XM_331062.1| Neurospora crassa OR74A hypothetical protein (NCU02287.1) partial
            mRNA
          Length = 1641

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  gggcggcaaggtcgagaggc 180
            ||||||||||||||||||||
Sbjct: 1509 gggcggcaaggtcgagaggc 1528

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      gccatggaggaggacgccgagggc 210
                |||||||||||||||| |||||||
Sbjct: 26761277 gccatggaggaggacgacgagggc 26761254

>ref|XM_533636.2| PREDICTED: Canis familiaris similar to hypoxia-inducible factor-3
            alpha isoform a (LOC476429), mRNA
          Length = 1956

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 186  agccatggaggaggacgccgaggg 209
            ||||||||||||||| ||||||||
Sbjct: 1734 agccatggaggaggaggccgaggg 1711

>emb|AL031729.16|HS159A19 Human DNA sequence from clone RP1-159A19 on chromosome 1p36.13 Contains
             the gene for a novel protein, the FGR gene for
             Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene
             homolog, a novel pseudogene, the 3' end of a novel gene
             and two CpG islands, complete sequence
          Length = 125287

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cgctccctccctccgtctct 96
             ||||||||||||||||||||
Sbjct: 50433 cgctccctccctccgtctct 50414

>emb|AL445067.1|TACID5 Thermoplasma acidophilum complete genome; segment 5/5
          Length = 268356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 151    aaggcttcacgggcggcaaggtcg 174
              ||||||||| ||||||||||||||
Sbjct: 167484 aaggcttcaagggcggcaaggtcg 167461

>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 152     aggcttcacgggcggcaaggtcga 175
               ||||||||| ||||||||||||||
Sbjct: 3630743 aggcttcacaggcggcaaggtcga 3630766

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      gagccgccgccagcgggcgc 301
                ||||||||||||||||||||
Sbjct: 11375413 gagccgccgccagcgggcgc 11375432

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 187      gccatggaggaggacgccgagggc 210
                |||||||||||||||| |||||||
Sbjct: 26852600 gccatggaggaggacgacgagggc 26852577

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 178      ggcggcggagccatggaggaggac 201
                |||||||| |||||||||||||||
Sbjct: 23551824 ggcggcggcgccatggaggaggac 23551801

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    gccgcttcgaccgcgacggg 267
              ||||||||||||||||||||
Sbjct: 837077 gccgcttcgaccgcgacggg 837058

>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0656C04
          Length = 143411

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   gagccgccgccagcgggcgc 301
             ||||||||||||||||||||
Sbjct: 75924 gagccgccgccagcgggcgc 75943

>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 178    ggcggcggagccatggaggaggac 201
              |||||||| |||||||||||||||
Sbjct: 117507 ggcggcggcgccatggaggaggac 117484

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    ggcggccgcttcgaccgcga 263
              ||||||||||||||||||||
Sbjct: 684560 ggcggccgcttcgaccgcga 684579

>dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B07, full
           insert sequence
          Length = 1424

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 187 gccatggaggaggacgccgagggc 210
           |||||||||||||||| |||||||
Sbjct: 642 gccatggaggaggacgacgagggc 665

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 244     ggcggccgcttcgaccgcga 263
               ||||||||||||||||||||
Sbjct: 1947569 ggcggccgcttcgaccgcga 1947588

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 191    tggaggaggacgccgagggcatgg 214
              |||||||| |||||||||||||||
Sbjct: 383809 tggaggagaacgccgagggcatgg 383832

>emb|AL627184.18| Mouse DNA sequence from clone RP23-125F21 on chromosome 4, complete
             sequence
          Length = 152069

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cgctccctccctccgtctct 96
             ||||||||||||||||||||
Sbjct: 50727 cgctccctccctccgtctct 50708


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,825,806
Number of Sequences: 3902068
Number of extensions: 1825806
Number of successful extensions: 48982
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48505
Number of HSP's gapped (non-prelim): 477
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)