ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl53g06 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 100 bits (249), Expect = 2e-21 Identities = 51/79 (64%), Positives = 57/79 (72%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 L+AVLKE VDLENIP+EEV +NLRC+REGLTA AQ+RL IFG N Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTREGLTATAAQERLSIFGYNKLEEKKESKFLKFLG 67 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAAIMAIA Sbjct: 68 FMWNPLSWVMEAAAIMAIA 86
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 99.8 bits (247), Expect = 3e-21 Identities = 50/79 (63%), Positives = 57/79 (72%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 L+AVLKE VDLENIP+EEV +NLRC++EGLTA AQ+RL IFG N Sbjct: 8 LDAVLKETVDLENIPIEEVFENLRCTKEGLTATAAQERLSIFGYNKLEEKKESKFSKFLG 67 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAAIMAIA Sbjct: 68 FMWNPLSWVMEAAAIMAIA 86
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 99.0 bits (245), Expect = 5e-21 Identities = 50/79 (63%), Positives = 57/79 (72%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 L+AVLKE VDLENIP+EEV +NLRC++EGLTA AQ+RL IFG N Sbjct: 9 LDAVLKEAVDLENIPIEEVFENLRCTKEGLTATAAQERLAIFGYNKLEEKKDSKLLKFLG 68 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAAIMAIA Sbjct: 69 FMWNPLSWVMEAAAIMAIA 87
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 98.6 bits (244), Expect = 6e-21 Identities = 49/79 (62%), Positives = 56/79 (70%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 LEAVLKE VDLEN+P+EEV ++LRCSREGLT E A +RL +FG N Sbjct: 8 LEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLG 67 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAAIMAIA Sbjct: 68 FMWNPLSWVMEAAAIMAIA 86
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump| 4) Length = 960 Score = 98.2 bits (243), Expect = 8e-21 Identities = 48/79 (60%), Positives = 56/79 (70%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 LEAVLKE VDLEN+P+EEV +NLRCS+EGLT + A +RL +FG N Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAAIMAIA Sbjct: 72 FMWNPLSWVMEAAAIMAIA 90
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 91.7 bits (226), Expect = 8e-19 Identities = 44/83 (53%), Positives = 56/83 (67%) Frame = +1 Query: 205 EAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXX 384 +A +LE + E VDLE IP+EEV + L+C+REGL+A++ RLQIFGPN Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62 Query: 385 XXXXXMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAA+MAIA Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIA 85
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump| 3) Length = 948 Score = 91.3 bits (225), Expect = 1e-18 Identities = 45/82 (54%), Positives = 53/82 (64%) Frame = +1 Query: 208 AGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXX 387 A LE ++ E VDLE IP+EEV L+CSREGL+ + + RLQIFGPN Sbjct: 1 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLK 60 Query: 388 XXXXMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAAIMAIA Sbjct: 61 FLGFMWNPLSWVMEAAAIMAIA 82
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump| 2) Length = 947 Score = 90.1 bits (222), Expect = 2e-18 Identities = 43/80 (53%), Positives = 52/80 (65%) Frame = +1 Query: 214 NLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXX 393 +LE + E VDLE IP+EEV L+CSREGLT ++ + R+QIFGPN Sbjct: 2 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 61 Query: 394 XXMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+E AAIMAIA Sbjct: 62 GFMWNPLSWVMEMAAIMAIA 81
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 89.0 bits (219), Expect = 5e-18 Identities = 42/81 (51%), Positives = 54/81 (66%) Frame = +1 Query: 211 GNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXX 390 G LE + E VDLENIP+EEV + L+C+R+GLT+++ QR++IFG N Sbjct: 2 GGLEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKF 61 Query: 391 XXXMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+E AAIMAIA Sbjct: 62 LGFMWNPLSWVMEMAAIMAIA 82
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump| 9) Length = 954 Score = 87.8 bits (216), Expect = 1e-17 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 4/86 (4%) Frame = +1 Query: 208 AGNLEA----VLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXX 375 AGN ++ + E +DLE IP+EEVL LRC+REGLT+++ Q RL+IFGPN Sbjct: 2 AGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKEN 61 Query: 376 XXXXXXXXMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+E AAIMAIA Sbjct: 62 KVLKFLGFMWNPLSWVMELAAIMAIA 87
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump| 1) Length = 948 Score = 87.0 bits (214), Expect = 2e-17 Identities = 41/79 (51%), Positives = 51/79 (64%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 LE + E VDLE IP+EEV L+C+REGLT ++ + R+ IFGPN Sbjct: 3 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 62 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAA+MAIA Sbjct: 63 FMWNPLSWVMEAAALMAIA 81
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump| 6) Length = 949 Score = 84.0 bits (206), Expect = 2e-16 Identities = 41/77 (53%), Positives = 51/77 (66%) Frame = +1 Query: 220 EAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXX 399 + + KE VDLE IP++EV L+CSREGL++E+ + RLQIFG N Sbjct: 8 DEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGF 67 Query: 400 MWNPLSWVVEAAAIMAI 450 MWNPLSWV+EAAAIMAI Sbjct: 68 MWNPLSWVMEAAAIMAI 84
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump| 7) Length = 961 Score = 84.0 bits (206), Expect = 2e-16 Identities = 38/78 (48%), Positives = 53/78 (67%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 L+A+ E +DLEN+P+EEV +L+C++EGLT+ + Q+RL +FG N Sbjct: 7 LKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFLG 66 Query: 397 XMWNPLSWVVEAAAIMAI 450 MWNPLSWV+EAAA+MAI Sbjct: 67 FMWNPLSWVMEAAALMAI 84
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump| 5) Length = 948 Score = 82.0 bits (201), Expect = 6e-16 Identities = 38/79 (48%), Positives = 50/79 (63%) Frame = +1 Query: 217 LEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXX 396 L+ + E VDL IP+EEV + L+C+++GLTA +A RL +FGPN Sbjct: 3 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 62 Query: 397 XMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+E AA+MAIA Sbjct: 63 FMWNPLSWVMEVAALMAIA 81
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump| 8) Length = 948 Score = 81.3 bits (199), Expect = 1e-15 Identities = 38/77 (49%), Positives = 52/77 (67%) Frame = +1 Query: 220 EAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXX 399 + + KE VDLE IP+EEV + L+CS+EGL++++ +RL+IFG N Sbjct: 8 DEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGF 67 Query: 400 MWNPLSWVVEAAAIMAI 450 MWNPLSWV+E+AAIMAI Sbjct: 68 MWNPLSWVMESAAIMAI 84
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 72.4 bits (176), Expect = 5e-13 Identities = 38/85 (44%), Positives = 52/85 (61%) Frame = +1 Query: 199 DKEAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXX 378 DK + + ++ +DL +PLEEV + LR S +GL + A++RL+IFGPN Sbjct: 6 DKPLLDPDTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENR 65 Query: 379 XXXXXXXMWNPLSWVVEAAAIMAIA 453 MWNPLSWV+EAAA+MAIA Sbjct: 66 FVKFLGFMWNPLSWVMEAAALMAIA 90
>PMAX_ARATH (Q9T0E0) Putative ATPase, plasma membrane-like| Length = 813 Score = 69.3 bits (168), Expect = 4e-12 Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Frame = +1 Query: 244 DLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPN-XXXXXXXXXXXXXXXXMWNPLSW 420 DLE IP+EEV LRCSREGL+ + ++RL+IFGPN M+ PLSW Sbjct: 17 DLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSW 76 Query: 421 VVEAAAIMAI 450 V++AAAIMA+ Sbjct: 77 VIQAAAIMAM 86
>PMA1_DUNAC (P54210) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 1103 Score = 59.3 bits (142), Expect = 4e-09 Identities = 34/84 (40%), Positives = 44/84 (52%) Frame = +1 Query: 202 KEAGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXX 381 K A N + + EV D I LE+ L CS GL+ +A+ RL+ GPN Sbjct: 23 KSADNGDKGVDEV-DFAKIGLEDAFKYLNCSEHGLSGAEAEARLKQHGPNKLPDNSRNPV 81 Query: 382 XXXXXXMWNPLSWVVEAAAIMAIA 453 MWNPL+W +EAAAI+AIA Sbjct: 82 LVYFGYMWNPLAWAMEAAAIIAIA 105
>PMA1_DUNBI (P54211) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 1131 Score = 57.8 bits (138), Expect = 1e-08 Identities = 28/71 (39%), Positives = 39/71 (54%) Frame = +1 Query: 241 VDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSW 420 VD I L++ L C++ GL++ +A RLQ GPN MWNPL+W Sbjct: 32 VDFAKITLDDAFKYLNCNKHGLSSAEAAARLQQHGPNKLPDSSRNPVLVFLGYMWNPLAW 91 Query: 421 VVEAAAIMAIA 453 +EAAAI++IA Sbjct: 92 AMEAAAIISIA 102
>PMA1_DICDI (P54679) Probable plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (PAT2) Length = 1058 Score = 57.8 bits (138), Expect = 1e-08 Identities = 27/65 (41%), Positives = 38/65 (58%) Frame = +1 Query: 259 PLEEVLDNLRCSREGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSWVVEAAA 438 PL+ +L+ L+ + GLT +AQ+RL+ GPN MWNPLSW +E AA Sbjct: 169 PLDNILEELKANANGLTKAEAQKRLEEVGPNAIPDVKRYPILEFLYFMWNPLSWTMEVAA 228 Query: 439 IMAIA 453 I++IA Sbjct: 229 IVSIA 233
>Y1226_METJA (Q58623) Putative cation-transporting ATPase MJ1226 (EC 3.6.3.-)| Length = 805 Score = 43.1 bits (100), Expect = 3e-04 Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +1 Query: 262 LEEVLDNLRCS-REGLTAEQAQQRLQIFGPNXXXXXXXXXXXXXXXXMWNPLSWVVEAAA 438 +EE+ + + S + GL+ E+A++RL+I+G N WNP++W++E AA Sbjct: 8 VEEIEEEYKTSIKTGLSTEEAKKRLKIYGYNEIPEKKVHPIIKFLSYFWNPIAWMIEIAA 67 Query: 439 IMA 447 I++ Sbjct: 68 ILS 70
>AT1A_ARTSF (P17326) Sodium/potassium-transporting ATPase alpha chain (EC| 3.6.3.9) (Sodium pump) (Na+/K+ ATPase) Length = 996 Score = 34.7 bits (78), Expect = 0.11 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%) Frame = +1 Query: 202 KEAGNLEAVLKEV-VDLENIPLEEVLDNLRCSRE-GLTAEQAQQRLQIFGPN 351 K+ L + KE+ +D IPLEE+ L + E GLT+ QA+ L+ +GPN Sbjct: 4 KQGKQLSDLKKELELDQHKIPLEELCRRLGTNTETGLTSSQAKSHLEKYGPN 55
>ATCL_SYNP7 (P37278) Cation-transporting ATPase pacL (EC 3.6.3.-)| Length = 926 Score = 34.3 bits (77), Expect = 0.15 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = +1 Query: 208 AGNLEAVLKEVVDLENIPLEEVLDNLRCSREGLTAEQAQQRLQIFGPN 351 + +L V + + ++ +EE L R GLTAE A RL ++GPN Sbjct: 7 SASLTDVRQPIAHWHSLTVEECHQQLDAHRNGLTAEVAADRLALYGPN 54
>ATMB_SALTY (P22036) Magnesium-transporting ATPase, P-type 1 (EC 3.6.3.2)| (Mg(2+) transport ATPase, P-type 1) Length = 908 Score = 33.1 bits (74), Expect = 0.33 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = +1 Query: 265 EEVLDNLRCSREGLTAEQAQQRLQIFGPN 351 EE L L R+GLT E+A +RL+++G N Sbjct: 37 EETLARLNSHRQGLTIEEASERLKVYGRN 65
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 32.0 bits (71), Expect = 0.74 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = +1 Query: 34 PHPKNSIPSAEAKKIQPEPEGLLTSGRPARGTAHPPGRGR 153 P P P A + P P G+ GRPAR A PG GR Sbjct: 202 PRPGAPRPGASPGNMPPRPGGVGGPGRPARPGAPRPGGGR 241
>Y250_ARCFU (O29989) Hypothetical protein AF0250| Length = 110 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +1 Query: 205 EAGNLEAVLKEVVDLENIPLEEVLDNLR 288 E GNLE V + +EN+P+EEV+ LR Sbjct: 82 EKGNLEEVFELAEKIENMPIEEVVKMLR 109
>SOX3_HUMAN (P41225) Transcription factor SOX-3| Length = 446 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = +1 Query: 7 LLLQVLHSTPHPKNSIPSAEAKKIQPEPEGLLTSGRPARGTAHPPGRGRH 156 L +L S P P +S+ E +GL T PA G PP H Sbjct: 20 LARSILISLPFPPDSLAHRPPSSAPTESQGLFTVAAPAPGAPSPPATLAH 69
>Y463_MYCPN (P75320) Hypothetical protein MPN463 (H08_orf157a)| Length = 157 Score = 29.6 bits (65), Expect = 3.7 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +1 Query: 4 LLLLQVLHSTPHPKNSIPSAEAKKIQPEPEGLLTS 108 L + Q LH TPH K S ++ + K +P P G L + Sbjct: 75 LAINQELHLTPHKKTSPATSSSLKPRPGPRGYLNA 109
>THIE_CHLCV (Q824E9) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 212 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%) Frame = +1 Query: 238 VVDLENIPLEEVLDNL-RCSREGLTAEQAQQR 330 + D +NIP+EE LD + C + G+TA Q +++ Sbjct: 11 ITDRQNIPMEEYLDFVSACVQSGVTAVQLREK 42
>CECR5_HUMAN (Q9BXW7) Cat eye syndrome critical region protein 5 precursor| Length = 423 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 11/51 (21%) Frame = +1 Query: 22 LHSTPHPKNSIPSAEAKKIQPEP-----------EGLLTSGRPARGTAHPP 141 L +TP P+N P E + EP + LL++G P G A PP Sbjct: 176 LKTTPLPRNDFPRIEGVLLLGEPVRWETSLQLIMDVLLSNGSPGAGLATPP 226
>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) (mTCF-3) Length = 584 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 152 LPLPGGWAVPLAGRPLVSKPSG 87 +P P GW VP G+P+ S P G Sbjct: 241 IPHPLGWLVPQQGQPMYSLPPG 262
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +1 Query: 37 HPKNSIPSAEAKKIQPEPEGLLTSGRPA 120 HPK P+AE K +PEP+ +++G PA Sbjct: 1631 HPKTPEPAAETK--EPEPKAPVSAGLPA 1656
>TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) Length = 588 Score = 28.5 bits (62), Expect = 8.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -3 Query: 152 LPLPGGWAVPLAGRPLVSKPSG 87 +P P GW VP G+P+ S P G Sbjct: 244 IPHPLGWLVPQQGQPMYSLPPG 265
>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2| Length = 924 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Frame = +1 Query: 19 VLHSTPHPKNSIPSAEAKKIQPEPEGLLTSG--RPARGTAHPPGRGR 153 V P P PSA + P P G + G RP R PG GR Sbjct: 188 VARPIPRPPAPRPSASPSSMSPRPGGAVGGGGPRPPRTGVPRPGGGR 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,786,400 Number of Sequences: 219361 Number of extensions: 572787 Number of successful extensions: 1755 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1745 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
