Clone Information

BLAST Search Result

Clone Name	bastl53g02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)	34	0.13
2	HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated...	34	0.13
3	WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting ...	33	0.29
4	ENAH_HUMAN (Q8N8S7) Protein enabled homolog	33	0.37
5	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	32	0.64
6	WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protei...	32	0.64
7	WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)	32	0.83
8	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	32	0.83
9	HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated...	31	1.1
10	HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated...	31	1.1
11	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	31	1.1
12	CAP1_ARATH (Q8S9J8) Putative clathrin assembly protein At4g32285	31	1.1
13	ALL1_ARTVU (Q84ZX5) Major pollen allergen Art v 1 precursor	31	1.1
14	HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated c...	31	1.1
15	VGLC_PRVIF (P06024) Glycoprotein GIII precursor	31	1.4
16	GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region ge...	31	1.4
17	MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)	30	1.9
18	POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1....	30	1.9
19	WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protei...	30	1.9
20	ELK1_MOUSE (P41969) ETS domain-containing protein Elk-1	30	1.9
21	EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)	30	1.9
22	LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage prote...	30	2.4
23	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	30	2.4
24	VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)	30	2.4
25	PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor	30	2.4
26	PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)	30	3.2
27	PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein ...	30	3.2
28	IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein	29	4.1
29	TRPB2_MAIZE (P43284) Tryptophan synthase beta chain 2, chloropla...	29	4.1
30	MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-...	29	4.1
31	VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)	29	5.4
32	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	29	5.4
33	WN10A_HUMAN (Q9GZT5) Protein Wnt-10a precursor	29	5.4
34	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	29	5.4
35	FOXI1_HUMAN (Q12951) Forkhead box protein I1 (Forkhead-related p...	29	5.4
36	Y369_TREPA (O83384) Hypothetical protein TP0369 precursor	29	5.4
37	WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem...	29	5.4
38	EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400...	28	7.1
39	X92_TRYBB (P12304) Protein X92	28	7.1
40	WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)	28	7.1
41	KLF10_RAT (O08876) Krueppel-like factor 10 (Transforming growth ...	28	7.1
42	TULP1_HUMAN (O00294) Tubby-related protein 1 (Tubby-like protein 1)	28	7.1
43	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	28	7.1
44	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	28	7.1
45	INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)	28	7.1
46	ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Se...	28	9.2
47	RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X ...	28	9.2
48	VNUA_PRVKA (P33485) Probable nuclear antigen	28	9.2
49	WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family mem...	28	9.2
50	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	28	9.2
51	FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-l...	28	9.2
52	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	28	9.2
53	MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-pro...	28	9.2
54	BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dep...	28	9.2
55	FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	28	9.2
56	TEGU_EHV1B (P28955) Large tegument protein	28	9.2

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
 Frame = +2

Query: 11  ANSKEIPLQKPAPPIVFPN--VSNAGTLAPPPCG-----HPKPPRSHGRQRRGRPQVARD 169
           +++   P Q P PP   PN  ++N  T  PPP G     +P PP  HG  + G P     
Sbjct: 587 SSASNSPQQTP-PPAPPPNQGMNNMATPPPPPQGAAGGGYPMPPHMHGGYKMGGP----- 640

Query: 170 GGRDIGAEALP 202
            G+  GA+  P
Sbjct: 641 -GQSPGAQGYP 650



 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 26  IPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQR 142
           +P   P   +V  +V   GT  PP  G P PP+  G  R
Sbjct: 728 VPGGAPGGAMVGNHVQGKGTPPPPVVGGPPPPQGSGSPR 766

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>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Hyperpolarization-activated
           cation channel 4) (HAC-4)
          Length = 1175

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 21/67 (31%), Positives = 26/67 (38%)
 Frame = +2

Query: 2   RKFANSKEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDGGRD 181
           R  A     P +   PP +       G  APP    P+ P S G QR     V  +GG  
Sbjct: 137 RLIAEGDASPGEDRTPPGLAAEPERPGAPAPPAASPPQVPSSCGEQRPADAAVKVEGGAA 196

Query: 182 IGAEALP 202
            G + LP
Sbjct: 197 AGDQILP 203



 Score = 29.6 bits (65), Expect = 3.2
 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNV------SNAGTLAPPPCGHPKPPRSHGRQRRGRPQVA 163
            P   P  P  FP+       S+   L PP    P PP     QRR  P +A
Sbjct: 1009 PGHSPGTPRTFPSAPPRASGSHGSLLLPPASSPPPPPPPPAPQRRATPPLA 1059

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>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = +2

Query: 20  KEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRG----RPQVARDGGRDIG 187
           + + L  P PP+  P+   +G L PPP   P PP      R G     P + R+G     
Sbjct: 321 RNLSLTSPTPPL--PSPGRSGPLPPPPTERPPPPVRDPPGRSGPLPPPPPINRNGST--- 375

Query: 188 AEALP 202
           A ALP
Sbjct: 376 ARALP 380

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>ENAH_HUMAN (Q8N8S7) Protein enabled homolog|
          Length = 591

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           PL  P PP + P  + A    PPP G P PP
Sbjct: 310 PLAPPPPPPLPPGPAQASVALPPPPGPPPPP 340

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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
 Frame = +2

Query: 20  KEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRG----RPQVARDGGRDIG 187
           + + L    PP+  P+   +G L PPP   P PP      R G     P V+R+G     
Sbjct: 337 RNLSLSSSTPPL--PSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRA 394

Query: 188 AEALP 202
             A P
Sbjct: 395 LPATP 399

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>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 17  SKEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQ--RRGRP 154
           ++E P +  APP   P + N    APPP   P P R HG +   RG+P
Sbjct: 315 AREPPSRGAAPPPPPPMIRNGARDAPPP---PPPYRMHGSEPPSRGKP 359

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>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +2

Query: 35  QKPAPPIVFPNVSNAGTLAPPPCG-HPKPPRSHGRQRRGR 151
           Q P PPIV  N   +G L P P G  P PP   G    GR
Sbjct: 324 QLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGR 363

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = +2

Query: 20  KEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRG----RPQVARDGGRDIG 187
           + + L   APP+  P+   +G L PPP   P PP      R G     P + R+G     
Sbjct: 327 RNLSLTSSAPPL--PSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPINRNGST--- 381

Query: 188 AEALP 202
           A ALP
Sbjct: 382 ARALP 386

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>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Brain cyclic nucleotide gated
            channel 3) (BCNG-3)
          Length = 1186

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNV-----SNAGTLAPPPCGHPKPPRSHGRQRRGRP 154
            P   P PP  FP+       + G+L  PP   P PP+    QRRG P
Sbjct: 1013 PGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQV--PQRRGTP 1057

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>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNV-----SNAGTLAPPPCGHPKPPRSHGRQRRGRP 154
            P   P PP  FP+       + G+L  PP   P PP+    QRRG P
Sbjct: 1028 PGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQV--PQRRGTP 1072

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
 Frame = +2

Query: 29  PLQKPAP------PIVFPNVSNAG---TLAPPPCGHPKP---PRSHGRQR---RGRPQVA 163
           P+ KPAP      P V  N  + G     AP P G P+P   PR  G  R   +GRP   
Sbjct: 189 PMGKPAPKPGARAPRVANNPFSTGGGERPAPRPGGGPRPGGGPRPGGGPRPQGQGRPGGQ 248

Query: 164 RDGGRD 181
           RDG RD
Sbjct: 249 RDGQRD 254

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>CAP1_ARATH (Q8S9J8) Putative clathrin assembly protein At4g32285|
          Length = 635

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 41  PAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARD 169
           PAPP+  P   N     PPP  H  PP      +  +PQV  D
Sbjct: 374 PAPPVEEPVDMNEIKALPPPENHTPPPPPAPEPKPQQPQVTDD 416

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>ALL1_ARTVU (Q84ZX5) Major pollen allergen Art v 1 precursor|
          Length = 132

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/56 (39%), Positives = 26/56 (46%)
 Frame = +2

Query: 8   FANSKEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDGG 175
           F  SK  P   PAPP   P  +  G+ +PP  G   PP + G    G P V  DGG
Sbjct: 75  FDCSKSPPGATPAPPGAAPPPAAGGSPSPPADGGSPPPPADG----GSPPV--DGG 124

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>HCN4_RAT (Q9JKA7) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1198

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNV-----SNAGTLAPPPCGHPKPPRSHGRQRRGRP 154
            P   P PP  FP+       + G+L  PP   P PP+    QRRG P
Sbjct: 1026 PGHSPGPPRTFPSAPPRASGSHGSLLLPPASSPPPPQV--PQRRGTP 1070

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>VGLC_PRVIF (P06024) Glycoprotein GIII precursor|
          Length = 479

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = +2

Query: 14  NSKEIPLQKPAPPIVFPNVSNAGTLAPPPCGHP-----KPPRSHGRQR 142
           NS E  L    PP   P    AG ++ PP   P     KPPR++ R R
Sbjct: 40  NSSEGELSPSPPPTPAPASPEAGAVSTPPVPPPSVSRRKPPRNNNRTR 87

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>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +2

Query: 14   NSKEIPLQKPAPPIVFPNVSNAGTLA-PPPCGHPK--PPRSH 130
            N ++ P + PAP   +P+ ++AGT A PPP   P+  PP SH
Sbjct: 1459 NLQQAPGRTPAPS--YPHAASAGTPASPPPLHRPEAYPPSSH 1498

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>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
            P   P+PP   P+     T  PPP   P PP
Sbjct: 1473 PTTTPSPPTTTPSPPTTTTTTPPPTTTPSPP 1503



 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
            P   P+PP+  P    A T   PP   P PP
Sbjct: 1496 PTTTPSPPMTTPITPPASTTTLPPTTTPSPP 1526

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>POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           2)
          Length = 750

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 95  PPCGHPKPPRSHGRQRRGR--PQVARDGGRDIGAEAL 199
           PP        S  R RRGR  PQ AR  GRD+ AEA+
Sbjct: 2   PPATGGGLAESELRPRRGRCGPQAARAAGRDVAAEAV 38

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>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related|
           protein) (WIP-and CR16-homologous protein)
          Length = 440

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 17  SKEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQ--RRGRP 154
           +++ P +  APP   P + N    APPP   P P R HG +   RG+P
Sbjct: 315 ARDPPSRGAAPPPPPPVIRNGARDAPPP---PPPYRMHGSEPPSRGKP 359

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>ELK1_MOUSE (P41969) ETS domain-containing protein Elk-1|
          Length = 429

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +2

Query: 11  ANSKEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDGG 175
           A    +PLQ    P   PN  +      P  GHP+PP +     +   + AR GG
Sbjct: 211 AEEAGLPLQVILTPPEAPNQKSEELSLDPSFGHPQPPEAKVEGPKEELEAARAGG 265

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>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)|
          Length = 283

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRS 127
           P  KP PP+  PN     T  P     PKPP S
Sbjct: 159 PTPKPTPPVYTPNPKPPVTKPPTHTPSPKPPTS 191

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>LIN10_CAEEL (O17583) Protein lin-10 (Abnormal cell lineage protein 10)|
          Length = 982

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLA-PPPCGHPKPPRSHGRQRRGRPQVARDGGRDI----GAE 193
           P   P P +   +   +G LA PPP  HP P R  G    G P+  ++ G       GA+
Sbjct: 445 PFDSPPPSMPSTSSGPSGALAPPPPPSHPIPRRVSG---NGWPEENKENGTSTSTTNGAQ 501

Query: 194 ALP 202
           ++P
Sbjct: 502 SVP 504

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 26  IPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           +P   P+ P   P +S AG+ APPP   P PP
Sbjct: 347 LPSSAPSGPPPPPPLSMAGSTAPPPPPPPPPP 378

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>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 374

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 20  KEIPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           +E+  QK  P  +   VSNAG    PP G P PP
Sbjct: 135 EELEQQKRQPEHMERRVSNAGGPPAPPAGGPPPP 168

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>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor|
          Length = 261

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +2

Query: 14  NSKEIPLQKPAPPIVFPNVS-NAGTLAPPPCGHPKPPRSHGRQRRGRPQ 157
           N  +IP Q+P P    P    N     PPP G P+P    G    G PQ
Sbjct: 25  NQIQIPNQRPPPSGFQPRPPVNGSQQGPPPPGGPQPRPPQGPPPPGGPQ 73

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>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)|
          Length = 296

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +2

Query: 14  NSKEIPLQKPAPPIVFPNVS-NAGTLAPPPCGHPKPPRSHGRQRRGRPQ 157
           N  +IP Q+P P    P    N     PPP G P+P    G    G PQ
Sbjct: 4   NQIQIPNQRPPPSGSQPRPPVNGSQQGPPPPGGPQPRPPQGPPPPGGPQ 52

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>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor|
           (PRP-1/PRP-2) (Parotid proline-rich protein 1/2)
           (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa)
           (Parotid isoelectric focusing variant protein) (PIF-S)
           (Parotid double-band
          Length = 166

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
 Frame = +2

Query: 35  QKPAPPIVFPN-VSNAGTLAPPPCGHPK-PPR--SHGRQRRGRPQ-VARDGGRDIGAEAL 199
           Q P PP   P      G   PPP G P+ PP+   H R  RGRPQ   + GG   G    
Sbjct: 82  QGPPPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPP 141

Query: 200 P 202
           P
Sbjct: 142 P 142

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>IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein|
          Length = 327

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 35  QKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDGGRDIGAEAL 199
           + PAPP V P    A  +   P G P P  +  ++ R   +    GG D  AE +
Sbjct: 207 EPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEM 261

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>TRPB2_MAIZE (P43284) Tryptophan synthase beta chain 2, chloroplast precursor|
           (EC 4.2.1.20) (Orange pericarp 2) (Fragment)
          Length = 443

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 110 PKPPRSHGRQRRGRPQVARDGGRDIGAEALP 202
           P PP   GR+RRGR + A   G+ + AEA P
Sbjct: 3   PPPPAPEGRRRRGRGRNA--AGQAVAAEASP 31

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>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
            protein MBD6)
          Length = 1003

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 14/76 (18%)
 Frame = +2

Query: 17   SKEIPLQKPAPPIVFPNVSNAGTLAP-----------PPCGHPKPPRSHGRQRRGRPQVA 163
            S +IP ++P  P + P  S A  L P           PP G P PP       RG  +  
Sbjct: 800  SLQIPPEQPEAPCLPPE-SPASALEPEPARPPLSALAPPHGSPDPPVPELLTGRGSGKRG 858

Query: 164  RDGG---RDIGAEALP 202
            R GG   R I  EA P
Sbjct: 859  RRGGGGLRGINGEARP 874

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>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 383

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 35  QKPAPPIVFPN-VSNAGTLAPPPCGHPKPP 121
           Q+P PP      VSNAG    PP G P PP
Sbjct: 146 QQPGPPEHLERRVSNAGGPPAPPAGGPPPP 175

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 26  IPLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           +P   P+ P   P  S AG+ APPP   P PP
Sbjct: 347 LPSSAPSGPPPPPPPSMAGSTAPPPPPPPPPP 378

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>WN10A_HUMAN (Q9GZT5) Protein Wnt-10a precursor|
          Length = 417

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 53  IVFPNVSNAGTLAPPPCGHPKP-PRSHGRQRRGRP 154
           ++ P+  N G L P P G P P P + G +RR  P
Sbjct: 299 LIRPHNRNGGQLEPGPAGAPSPAPGAPGPRRRASP 333

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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 41  PAPPIVFPNVSNAGTLAPPPCGHPKPPRSHG 133
           P PP  +P+        PPP   P PP  HG
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHG 379

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>FOXI1_HUMAN (Q12951) Forkhead box protein I1 (Forkhead-related protein FKHL10)|
           (Forkhead-related transcription factor 6) (FREAC-6)
           (Hepatocyte nuclear factor 3 forkhead homolog 3)
           (HNF-3/fork-head homolog 3) (HFH-3)
          Length = 351

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 74  NAGTLAPPPC-----GHPKPPRSHGRQRRGRPQVARDGGRDIGAEALP 202
           N  T+ PPP        P  P+++G QR   P V+  GG D+G   +P
Sbjct: 39  NGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIP 86

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>Y369_TREPA (O83384) Hypothetical protein TP0369 precursor|
          Length = 516

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 38  KPAPPIVFPNVSNAGTLAPPPCGHP--KPPRSHGRQRRGRPQVARDGGRDIGAEALP 202
           +P+PP V P+ S     A PP   P  +PPR    + +  P+ A D  R +  E  P
Sbjct: 137 RPSPPPVSPSASKPKQRAVPPSPPPASEPPRE--AEVQAEPEPAEDSPRAMVPEEPP 191

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>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +2

Query: 41  PAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           PAPP+  P  S  G  APPP   P PP
Sbjct: 430 PAPPLGSPPSSKPG-FAPPPAPPPPPP 455

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>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNVSNAGTLAPPPCGHPKP-------PRSHGRQRRGRPQVARDG 172
            P Q+P PP+  P  +++ T A  P   P+P       P+    Q +G+P +   G
Sbjct: 2483 PPQQPPPPVPQPQAASSQTPAGQPAVQPQPQPQVQAQPQPVQPQSKGQPTMTTVG 2537

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>X92_TRYBB (P12304) Protein X92|
          Length = 549

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 53  IVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRG 148
           +  P VS +GT  P PC     PRS G++RRG
Sbjct: 447 VASPLVSLSGTRCPGPCSRRGWPRS-GKRRRG 477

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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = +2

Query: 47  PPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDG 172
           PP+V  N   +G L P P G   PP +     RG P   R G
Sbjct: 346 PPVVGSNKGRSGPLPPVPMGGAPPPPT----PRGPPPPGRGG 383

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>KLF10_RAT (O08876) Krueppel-like factor 10 (Transforming growth|
           factor-beta-inducible early growth response protein 1)
           (TGFB-inducible early growth response protein 1)
           (TIEG-1) (Zinc finger transcription factor homolog
           CPG20)
          Length = 480

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 32  LQKPAPPIVFPNVSNAGTLAPPPCGHPKPPR 124
           +Q P PP+V PN +    +AP P   P   R
Sbjct: 326 VQSPKPPVVSPNGTRLSPIAPAPGFSPSAAR 356

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>TULP1_HUMAN (O00294) Tubby-related protein 1 (Tubby-like protein 1)|
          Length = 542

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPP-PCGHPKPPRSHGRQRRGRPQ 157
           P Q+PAP      +    T AP  PC     PR  G  RRGRP+
Sbjct: 31  PKQRPAPA---QRLRKKRTEAPESPCPTGSKPRKPGAGRRGRPR 71

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           P   P PP   P+V   G +APPP   P PP
Sbjct: 355 PSGPPPPP---PSVLGVGPVAPPPPPPPPPP 382

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPP 121
           P   P PP   P +S +G++APPP   P PP
Sbjct: 355 PSGPPPPP---PPLSVSGSVAPPPPPPPPPP 382

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>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1708

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 41  PAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRP 154
           PAPP + P V     L PPP  H  PP S  + +   P
Sbjct: 221 PAPPTLAP-VPARRRLTPPPVTHALPPTSQLKVKEPEP 257

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>ECM1_HUMAN (Q16610) Extracellular matrix protein 1 precursor (Secretory|
           component p85)
          Length = 540

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 26  IPLQKPAPPIVFPNVSNAGTLAP-PPCGHPKP 118
           +PLQK  P +  PN    GT AP     HP+P
Sbjct: 111 VPLQKELPSLQHPNEQKEGTPAPFGDQSHPEP 142

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>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
          Length = 533

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGT-----LAPPPCGHPKPPRSHGRQRRGRPQVARDG 172
           P   P PP   P++  +G      + PPP G P P  S      G P  A  G
Sbjct: 100 PPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGLPPPAPPG 152

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHG---RQRRGRPQVARDGGR 178
           P  +P PP+  P         PPP   P+PP + G   R+RRG     R G R
Sbjct: 276 PPPRPPPPLPPP---------PPPPPPPQPPPAGGSARRRRRGGGPPGRGGRR 319

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>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
          Length = 497

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 41  PAPPIVFPNVSNAGTLAPPPCGHPKPPRS 127
           PAPP+  P     G  APPP   P PP S
Sbjct: 302 PAPPLSSPPGPKPG-FAPPPAPPPPPPMS 329

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = +2

Query: 29  PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDGG 175
           P Q+P PP            APPP   P PP+   R     P+ A +GG
Sbjct: 31  PQQQPPPP---------PPPAPPPGPGPAPPQHPPRAEALPPEAADEGG 70

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>FIP1_RAT (Q5U317) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 536

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 29  PLQKPAPPIVFP--NVSNAGTLAPPPCGHPKPP 121
           P   P PP + P   VS A  L PPP G P PP
Sbjct: 306 PTHLPPPPFLPPPPTVSTAPPLIPPP-GFPPPP 337

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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
           (Voltage-gated calcium channel alpha subunit Cav2.2)
           (Calcium channel, L type, alpha-1 polypeptide isoform 5)
           (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 110 PKPPRSHGRQRRGRPQVARDGGRDIGAE 193
           P+P RSH ++  G P+   + GR  G E
Sbjct: 886 PRPHRSHSKEAAGPPEARSERGRGPGPE 913

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>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3 (EC|
            2.7.11.1)
          Length = 1309

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = +2

Query: 41   PAPPIVFPNVSNAGTLAPPPC-GHPKPPRSHGRQRRGRPQVARDGGRDIGAEA 196
            P  P+  P +S     +P P  GHP  P    R RRG+       G  +  EA
Sbjct: 1185 PPSPLACPPISAPPPRSPSPLPGHPPAPARSPRLRRGQSADKLGTGERLDGEA 1237

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>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent|
           helicase brm) (Protein brahma)
          Length = 1638

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = +2

Query: 29  PLQKPAPP--IVFPNVSNAGTLAPPPCGHPKP---PRSHGRQRRGRP 154
           P Q PAP     +P+        PPP GHP     P  HG   +G P
Sbjct: 23  PSQSPAPSPHSPYPHQQPGPLQGPPPPGHPGAYGHPMQHGPPGQGPP 69

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>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
           (Factor interacting with PAP) (hFip1) (Rearranged in
           hypereosinophilia)
          Length = 594

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 29  PLQKPAPPIVFP--NVSNAGTLAPPPCGHPKPP 121
           P   P PP + P   VS A  L PPP G P PP
Sbjct: 366 PTHLPPPPFLPPPPTVSTAPPLIPPP-GFPPPP 397

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>TEGU_EHV1B (P28955) Large tegument protein|
          Length = 3421

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = +2

Query: 29   PLQKPAPPIVFPNVSNAGTLAPPPCGHPKPPRSHGRQRRGRPQVARDGGRDI 184
            P   PAPP+  P  ++     PPP   P PP      +        D G+ +
Sbjct: 2589 PTLPPAPPL--PQSTSKAASGPPPTLPPAPPLPQSTSKAASGATQSDSGKTL 2638


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,608,764
Number of Sequences: 219361
Number of extensions: 455728
Number of successful extensions: 3395
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3313
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result