ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl53f06 |
|---|---|
| Clone Library Name | barley_pub |
>YNQA_CAEEL (Q21986) Hypothetical protein R13F6.10 in chromosome III| Length = 958 Score = 56.2 bits (134), Expect = 3e-08 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%) Frame = +3 Query: 120 EWRVRPIWDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNA 299 E R+RPI+D++DS+Q+K AL C +L KHP + A LKALTL R+ K +A Sbjct: 10 ERRLRPIYDSLDSQQFKKALSDCDKVLKKHPNTSAAKVLKALTLIRLEK-------LADA 62 Query: 300 KELLYSNNI--FHFDDLTL 350 E+L + ++ H D+LTL Sbjct: 63 TEILEALDVPGAHHDELTL 81
>NAT1_YEAST (P12945) N-terminal acetyltransferase 1 (EC 2.3.1.88)| (Amino-terminal, alpha-amino, acetyltransferase 1) Length = 853 Score = 36.6 bits (83), Expect = 0.025 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = +3 Query: 153 DSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNA 299 + +QYK +LKL ++L K + +LALK L L +G+ D+A + NA Sbjct: 31 EGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANA 79
>NARGL_HUMAN (Q6N069) NMDA receptor-regulated 1-like protein (NARG1-like| protein) Length = 864 Score = 33.1 bits (74), Expect = 0.28 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 153 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 278 + +QYK LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>Y4667_PSEAE (P42810) Hypothetical protein PA4667| Length = 590 Score = 32.7 bits (73), Expect = 0.37 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = +3 Query: 195 LLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHFDDLTLSTLQIVFQ 374 LL K+P + L KAL L++ G+PDEALT LL N+ + L + Q Sbjct: 194 LLKKYPNNGQLLFGKALLLQQDGRPDEALT-------LLEDNSASRHEVAPLLLRSRLLQ 246 Query: 375 RLERLDLA 398 ++R D A Sbjct: 247 SMKRSDEA 254
>NARG1_MOUSE (Q80UM3) NMDA receptor-regulated protein 1 (N-terminal| aceyltransferase 1) (Tubedown-1 protein) Length = 865 Score = 32.0 bits (71), Expect = 0.62 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 153 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 278 + +QY+ LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>NARG1_PONPY (Q5R4J9) NMDA receptor-regulated protein 1| Length = 866 Score = 32.0 bits (71), Expect = 0.62 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 153 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 278 + +QY+ LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>NARG1_HUMAN (Q9BXJ9) NMDA receptor-regulated protein 1 (N-terminal| acetyltransferase) (Tubedown-1 protein) (Tbdn100) (Gastric cancer antigen Ga19) Length = 866 Score = 32.0 bits (71), Expect = 0.62 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +3 Query: 153 DSRQYKAALKLCTSLLAKHPTSPYA--LALKALTLERMGKPDEA 278 + +QY+ LK C +L+ + + LA+K LTL +GK +EA Sbjct: 22 EHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEA 65
>Y940_METJA (Q58350) Hypothetical protein MJ0940| Length = 318 Score = 31.6 bits (70), Expect = 0.81 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = +3 Query: 156 SRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHF 335 S +Y LK C L++ P A +KA L ++G+ +EAL C+N L N Sbjct: 131 SGKYDELLKCCDRLISFAPNFIPAYIIKANMLRKLGRYEEAL-ACVNKVLELKEN----- 184 Query: 336 DDLTLSTLQIVFQRLERLDLATSCYE 413 D + ++ R+ D A YE Sbjct: 185 DTNAIYLKALILNRIGNCDEALKYYE 210
>TTC19_HUMAN (Q6DKK2) Tetratricopeptide repeat protein 19 (TPR repeat protein| 19) Length = 380 Score = 31.2 bits (69), Expect = 1.1 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%) Frame = +3 Query: 159 RQYKAALKLCTSLLA-KHPTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHF 335 R Y+ AL++ + +HP + ++ A TL+ G+ DEA A +L + I H Sbjct: 258 RMYEKALQISEEIQGERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDL--ARQINHP 315 Query: 336 D-DLTLSTLQIVFQRLERLDLATSCYEYA 419 + + LS L V ER A Y+ A Sbjct: 316 ELHMVLSNLAAVLMHRERYTQAKEIYQEA 344
>NARGL_MOUSE (Q9DBB4) NMDA receptor-regulated 1-like protein (NARG1-like| protein) Length = 864 Score = 30.4 bits (67), Expect = 1.8 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +3 Query: 153 DSRQYKAALKLCTSLLA--KHPTSPYALALKALTLERMGKPDEA 278 + +QYK LK C +L+ K LA+K L L +GK +EA Sbjct: 22 EQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLILNCLGKREEA 65
>CDPK2_ORYSA (P53683) Calcium-dependent protein kinase, isoform 2 (EC| 2.7.11.1) (CDPK 2) Length = 533 Score = 30.0 bits (66), Expect = 2.4 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 Query: 3 PLLPPPALTRYTPAAQNP 56 P PPPA RYTP+A NP Sbjct: 39 PQPPPPAEVRYTPSAMNP 56
>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)| (CAIN) Length = 2220 Score = 29.6 bits (65), Expect = 3.1 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -3 Query: 152 DGVPDRPHPPLRDSAGE-PELAGHVSGPSRSRVRVLSGGGVAGESGRRK 9 +G+P PPL D +G PE G V G R + G A +SG RK Sbjct: 1701 EGLPQPKKPPLADGSGPGPEPGGKV-GLLNHRPVAMDAGDSADQSGERK 1748
>EMIL1_MOUSE (Q99K41) EMILIN-1 precursor (Elastin microfibril interface-located| protein 1) (Elastin microfibril interfacer 1) Length = 1017 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = -1 Query: 163 CRESTASQIGRTRHSGIP---PASPNLLAMSAGPHDLGLG 53 C E AS +G + +P P PNL SAG H GLG Sbjct: 131 CGEGPASVLGPAPSTPLPRPRPVRPNLSGSSAGSHLSGLG 170
>AFSR_STRCO (P25941) Regulatory protein afsR| Length = 993 Score = 29.3 bits (64), Expect = 4.0 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +3 Query: 120 EWRVRPIWDAVDSRQ----YKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTV 287 EWR++ + +D + A+ T+L A HP L L L R G+ EAL V Sbjct: 176 EWRLQLLETRLDMDLDQGCHAEAVSELTALTAAHPLRERLRELLMLALYRSGRQAEALAV 235 Query: 288 CLNAKELL 311 + + LL Sbjct: 236 YADTRRLL 243
>Y1345_METJA (Q58741) Hypothetical protein MJ1345| Length = 314 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +3 Query: 162 QYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLNAKEL 308 +Y ALK+ +L K+P S A A K L R GK ++L NA ++ Sbjct: 128 EYDYALKIIDKILKKYPKSAIAWAEKGEILYREGKLKKSLECFDNALKI 176
>TTC8_HUMAN (Q8TAM2) Tetratricopeptide repeat protein 8 (TPR repeat protein 8)| (Bardet-Biedl syndrome 8 protein) Length = 531 Score = 29.3 bits (64), Expect = 4.0 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +3 Query: 141 WDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDE 275 W R+++ LCT +L K P A LKA L M DE Sbjct: 12 WSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDE 56
>BCSC_PSEFL (P58937) Cellulose synthase operon protein C precursor| Length = 1279 Score = 29.3 bits (64), Expect = 4.0 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +3 Query: 195 LLAKHPTSPYALALKALTLERMGKPDEAL 281 +LA+HP P AL+ L + G+PDEAL Sbjct: 410 VLARHPGDPDALSGLINVLSQSGQPDEAL 438
>RIPK5_XENTR (Q67E00) Receptor-interacting serine/threonine-protein kinase 5 (EC| 2.7.11.1) (Dusty protein kinase) (Dusty PK) Length = 918 Score = 28.9 bits (63), Expect = 5.3 Identities = 28/93 (30%), Positives = 38/93 (40%) Frame = +3 Query: 117 PEWRVRPIWDAVDSRQYKAALKLCTSLLAKHPTSPYALALKALTLERMGKPDEALTVCLN 296 PEW+ R DA++S L S LAK S + LK+ EA L Sbjct: 553 PEWKRRVAQDAIES--------LSASKLAKSICSQFCKRLKS--------SHEAFAASLK 596 Query: 297 AKELLYSNNIFHFDDLTLSTLQIVFQRLERLDL 395 E+ +S + +DL L + RL RL L Sbjct: 597 QLEVGHSGRLEKTNDLWLRVRKDHAPRLARLSL 629
>Y1380_NEIMA (P67535) UPF0250 protein NMA1380| Length = 91 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 185 LHLAPRQAPHLTLRPRSQGSYFG 253 LH QA H+T RP S+G+Y G Sbjct: 39 LHAPDTQAHHITTRPSSKGNYTG 61
>Y1218_NEIMB (P67536) UPF0250 protein NMB1218| Length = 91 Score = 28.9 bits (63), Expect = 5.3 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 185 LHLAPRQAPHLTLRPRSQGSYFG 253 LH QA H+T RP S+G+Y G Sbjct: 39 LHAPDTQAHHITTRPSSKGNYTG 61
>GBF1_CRIGR (Q9R1D7) Golgi-specific brefeldin A-resistance guanine nucleotide| exchange factor 1 (BFA-resistant GEF 1) Length = 1856 Score = 28.5 bits (62), Expect = 6.9 Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%) Frame = +3 Query: 12 PPPALTRYTPAAQNPNPRS*GPADMASKFGLAGGIPEWRVRPIWDAVDSRQYKAALKLCT 191 PP +TR TP ++ P P L G+P V + S A + CT Sbjct: 236 PPRHMTRVTPGSELPAPNG-----ATLSCNLTSGMPFIDVPSSISSASSEAASAVVSPCT 290 Query: 192 SL---LAKHPTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNI 326 L+ TS L LE+ G P E+ T + E+ S+ + Sbjct: 291 DSGLELSSQTTSKEDLT----DLEQAGSPRESTTTESGSNEIGVSDQL 334
>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa| 1-like protein 1) Length = 1859 Score = 28.5 bits (62), Expect = 6.9 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = -3 Query: 107 GEPELAGHVSGPSRSRVRVLSGGGVAGESGRRKK 6 G PEL GH + S S+VR + GG G RK+ Sbjct: 1207 GYPELVGHSTVSSVSQVRACATGGEETGKGGRKQ 1240
>PMP21_CHLPN (Q9Z6U5) Probable outer membrane protein pmp21 precursor| (Polymorphic membrane protein 21) Length = 1609 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/54 (31%), Positives = 30/54 (55%) Frame = -1 Query: 322 LFEYNSSLAFKQTVSASSGFPILSKVRALRARA*GEVGCLARSEVQSLSAALYC 161 L E S +AFKQ +A +G + + + + A GE+ ++EV++ A+YC Sbjct: 466 LNETISEVAFKQNTAALTGGALSANDKVIIANNFGEI-LFEQNEVRNHGGAIYC 518
>CDC27_HUMAN (P30260) Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC)| Length = 824 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Frame = +3 Query: 210 PTSPYALALKALTLERMGKPDEALTVCLNAKELLYSNNIFHFDD---LTLSTLQIVFQRL 380 P Y LA + L ++ + ++ L+ + K+ + + + F D TLS L V+ + Sbjct: 69 PQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLGHVYCKT 128 Query: 381 ERLDLATSCYE 413 +RL + CY+ Sbjct: 129 DRLAKGSECYQ 139
>PITM1_RAT (Q5U2N3) Membrane-associated phosphatidylinositol transfer protein| 1 (Phosphatidylinositol transfer protein, membrane-associated 1) (Pyk2 N-terminal domain-interacting receptor 2) (NIR-2) Length = 1242 Score = 28.1 bits (61), Expect = 9.0 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = -3 Query: 161 SRVDGVPDRPH-PPLRDSAGEPELAGHVSGPSRSRVRVLSGGGVAGES 21 +R G PD P PP D++ + S SRS GGGV+ +S Sbjct: 282 TRTAGTPDGPEAPPGPDASPDASFGKQWSSSSRSSYSSQHGGGVSPQS 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,593,721 Number of Sequences: 219361 Number of extensions: 920912 Number of successful extensions: 3264 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3260 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
