ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl53f02 |
|---|---|
| Clone Library Name | barley_pub |
>CUCM1_CUCME (Q39547) Cucumisin precursor (EC 3.4.21.25) (Allergen Cuc m 1)| Length = 731 Score = 91.7 bits (226), Expect = 9e-19 Identities = 43/80 (53%), Positives = 53/80 (66%) Frame = +2 Query: 209 GIWSESPSFSDDGYAPRPPRWKGTCQSGKSFSPKSCNNKIIGARWYADVVNESQLVGEYL 388 GIW ESPSF D+G++P PP+WKGTC++ +F CN KIIGAR Y + G+ Sbjct: 142 GIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RCNRKIIGARSYH--IGRPISPGDVN 196 Query: 389 SPRDLNGHGTHVASIAAGNI 448 PRD NGHGTH AS AAG + Sbjct: 197 GPRDTNGHGTHTASTAAGGL 216
>SUBL_ARATH (O65351) Subtilisin-like protease precursor (EC 3.4.21.-)| (Cucumisin-like serine protease) Length = 757 Score = 85.1 bits (209), Expect = 8e-17 Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 7/87 (8%) Frame = +2 Query: 209 GIWSESPSFSDDGYAPRPPRWKGTCQSGKSFSPKSCNNKIIGARWYA-------DVVNES 367 G+W ES S+SD+G+ P P WKG C++G +F+ CN K+IGAR++A ++ES Sbjct: 141 GVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDES 200 Query: 368 QLVGEYLSPRDLNGHGTHVASIAAGNI 448 + E SPRD +GHGTH +S AAG++ Sbjct: 201 K---ESRSPRDDDGHGTHTSSTAAGSV 224
>XSP1_ARATH (Q9LLL8) Xylem serine proteinase 1 precursor (EC 3.4.21.-) (AtXSP1)| (Cucumisin-like protein) Length = 749 Score = 71.6 bits (174), Expect = 9e-13 Identities = 37/78 (47%), Positives = 48/78 (61%) Frame = +2 Query: 209 GIWSESPSFSDDGYAPRPPRWKGTCQSGKSFSPKSCNNKIIGARWYADVVNESQLVGEYL 388 GI +S SF D G P P +WKG+C K+F+ CNNKIIGA+++ N GE Sbjct: 147 GITPDSESFLDHGLGPPPAKWKGSCGPYKNFT--GCNNKIIGAKYFKHDGNVP--AGEVR 202 Query: 389 SPRDLNGHGTHVASIAAG 442 SP D++GHGTH +S AG Sbjct: 203 SPIDIDGHGTHTSSTVAG 220
>THES_BACSJ (Q45670) Thermophilic serine proteinase precursor (EC 3.4.21.-)| (Ak.1 protease) Length = 401 Score = 32.0 bits (71), Expect = 0.82 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +2 Query: 353 VVNESQLVGEYLSPRDLNGHGTHVASIAA 439 V+ V P DLN HGTHVA IAA Sbjct: 174 VIKGYDFVDNDYDPMDLNNHGTHVAGIAA 202
>GAG_FUJSV (P03326) Gag polyprotein [Contains: Core protein p19; Core protein| p10; Core protein p27] Length = 309 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 405 LRSLGDKYSPTSWDSLTTSAYHRAPMI 325 L SL D YSP SWD +T + RA ++ Sbjct: 39 LMSLSDLYSPGSWDPITAALTQRAMVL 65
>ISP1_BACSU (P11018) Major intracellular serine protease precursor (EC| 3.4.21.-) (ISP-1) Length = 319 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +2 Query: 287 SGKSFSPKSCNNKIIGARWYADVVNESQLVGEYLSPRDLNGHGTHVASIAAGN 445 +G S N+IIG + + D G+ + D NGHGTHVA A N Sbjct: 51 TGCDTSHPDLKNQIIGGKNFTDDDG-----GKEDAISDYNGHGTHVAGTIAAN 98
>THET_THEVU (P04072) Thermitase (EC 3.4.21.66)| Length = 279 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Frame = +2 Query: 227 PSFSDDGYAPR----PPRWKGTCQSGKSFSPKSCNNKIIGARWYADVVNESQLVGEYLSP 394 P FS Y P+ P W SG + + VV V +P Sbjct: 6 PYFSSRQYGPQKIQAPQAWDIAEGSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTP 65 Query: 395 RDLNGHGTHVASIAA 439 ++ NGHGTH A IAA Sbjct: 66 QNGNGHGTHCAGIAA 80
>YB64_YEAST (P38314) Protein YBR214W| Length = 527 Score = 28.9 bits (63), Expect = 6.9 Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 1/120 (0%) Frame = +3 Query: 96 SGGPDAGSIQLPATHLIWRHDGHFILDPDSLARCELLLVFGQSHRASVTMDTRPVLQDGR 275 S G + G P H + SLAR LV +SHR + Sbjct: 357 SRGLETGKDSFPIFH---------VYPSSSLARTLAKLVATKSHRLWIVQPPESSTSASS 407 Query: 276 ERVNLASPSAPR-AATTRSSVHGGTRMLSTNPN**VNICLPETSTAMAPMWPR*QRVTLP 452 + A+ +A +AT +SS +G T M ++ + +N P + P PR + +P Sbjct: 408 TNLTAANTAANAVSATAQSSANGATPMSKSSSSTSLNSHSPLMTAMEDPPSPRSSAIAIP 467
>YQ5C_CAEEL (Q09466) Putative ABC transporter C16C10.12 in chromosome III| Length = 610 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -2 Query: 179 WIQNKMSVMPPDEVSSRQLDGASI 108 WIQ+K+SV+P +E SR+ G I Sbjct: 284 WIQSKLSVIPNNETKSRETIGKII 307
>DOF57_ARATH (Q9LSL6) Dof zinc finger protein DOF5.7 (AtDOF5.7)| Length = 316 Score = 28.5 bits (62), Expect = 9.1 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = +3 Query: 84 GLSRSGGPDAGSIQLPATHLIWRHDGHFILDPDSLARCELLLVFGQSHRASVTMDT-RPV 260 G + +G D T D H+ L +A ++FG S +V ++ +P+ Sbjct: 194 GFTTAGASDGNLASSIETLSCLNQDLHWRLQQQRMA-----MLFGNSKEETVVVERPQPI 248 Query: 261 LQDGRERVNLASPSAP 308 L E VN +SPS+P Sbjct: 249 LYRNLEIVNSSSPSSP 264
>LEUD3_METAC (Q8TRF7) 3-isopropylmalate dehydratase small subunit 3 (EC| 4.2.1.33) (Isopropylmalate isomerase 3) (Alpha-IPM isomerase 3) (IPMI 3) Length = 164 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +2 Query: 320 NKIIGARW-YADVVNESQLV-GEYLSPRDLNGHGTH 421 N I+G W + D +N ++ G+YL RD+ GTH Sbjct: 3 NPIVGRVWKFGDDINTDAIIPGKYLRTRDMQIFGTH 38
>COX3_LEITA (P14546) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide III) Length = 284 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = +1 Query: 85 VFPGQVVLMLAPSSCLLLTSSGGMTDILFWIQIHWHDVSCCWYLV 219 VF G +L L S C L+ + ++WH V C W+ + Sbjct: 224 VFLGIFLLFLCFSRCFNFLCMDTRFVFLYVVCLYWHFVDCVWFFL 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,793,971 Number of Sequences: 219361 Number of extensions: 1461055 Number of successful extensions: 3690 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3607 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3684 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
