ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_471078.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
2emb|AL606609.2|OSJN00064 Oryza sativa genomic DNA, chromosome 4,... 54 4e-04
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
4gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 52 0.002
5gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 52 0.002
6gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
7gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
8dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.026
9dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 48 0.026
10dbj|AK110921.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.026
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.026
12emb|AL139254.23| Human DNA sequence from clone RP4-749H3 on chro... 44 0.41
13gb|AC091957.2| Homo sapiens chromosome 5 clone RP11-43E4, comple... 44 0.41
14gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I1... 44 0.41
15dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone... 44 0.41
16gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 m... 42 1.6
17ref|XM_811686.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.6
18gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, c... 42 1.6
19emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, ... 42 1.6
20gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, com... 42 1.6
21gb|AF435975.1| Homo sapiens dopamine- and cAMP-regulated neurona... 42 1.6
22gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, co... 42 1.6
23gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, comple... 42 1.6
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.6
26gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, compl... 42 1.6
27dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
29gb|AC164620.5| Mus musculus BAC clone RP23-64H20 from chromosome... 40 6.4
30ref|NM_187561.1| Oryza sativa (japonica cultivar-group), predic... 40 6.4
31ref|NM_197437.1| Oryza sativa (japonica cultivar-group) putative... 40 6.4
32gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, co... 40 6.4
33gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosom... 40 6.4
34gb|AC115045.13| Mus musculus chromosome 6, clone RP24-315D19, co... 40 6.4
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.4
36ref|XM_753130.1| Ustilago maydis 521 hypothetical protein (UM020... 40 6.4
37gb|AC125220.3| Mus musculus BAC clone RP23-70H20 from 15, comple... 40 6.4
38emb|AL590036.11| Human DNA sequence from clone RP11-379D21 on ch... 40 6.4
39ref|XM_500438.1| Yarrowia lipolytica CLIB122, YALI0B02794g predi... 40 6.4
40emb|AL033375.2|HS21F7 Human DNA sequence from clone RP1-21F7 on ... 40 6.4
41gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Canc... 40 6.4
42dbj|AK016584.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
45gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen... 40 6.4
46gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
47dbj|AK069238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
48dbj|AK069220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
49gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, com... 40 6.4
50gb|AC162941.5| Mus musculus BAC clone RP23-78N5 from chromosome ... 40 6.4
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.4
52emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 6.4
53gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosom... 40 6.4 
>ref|XM_471078.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2271

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 314 tgcaacaacaagatcatcggtgcacggtggtacgc 348
           |||||||  ||||||||||||||||||||||||||
Sbjct: 553 tgcaacaggaagatcatcggtgcacggtggtacgc 587
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>emb|AL606609.2|OSJN00064 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K24,
             complete sequence
          Length = 121799

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 314   tgcaacaacaagatcatcggtgcacggtggtacgc 348
             |||||||  ||||||||||||||||||||||||||
Sbjct: 48806 tgcaacaggaagatcatcggtgcacggtggtacgc 48840
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 314     tgcaacaacaagatcatcggtgcacggtggtacgc 348
               |||||||  ||||||||||||||||||||||||||
Sbjct: 1268840 tgcaacaggaagatcatcggtgcacggtggtacgc 1268874
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 397    agacctcaacggccatggcacccatgtggc 426
              ||||||||||||||| ||||||||||||||
Sbjct: 848260 agacctcaacggccacggcacccatgtggc 848231
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>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 398     gacctcaacggccatggcacccatgtggcc 427
               |||||||||||||||||||| |||||||||
Sbjct: 2410877 gacctcaacggccatggcactcatgtggcc 2410906
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>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0059C14, complete sequence
          Length = 142138

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 407   ggccatggcacccatgtggcctcgatagcagc 438
             ||||||||||||||||||||||| | ||||||
Sbjct: 12927 ggccatggcacccatgtggcctccacagcagc 12896
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>gb|AC145366.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0014O08
              map near S2137, complete sequence
          Length = 134033

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 407    ggccatggcacccatgtggcctcgatagcagc 438
              ||||||||||||||||||||||| | ||||||
Sbjct: 125322 ggccatggcacccatgtggcctccacagcagc 125291
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 407     ggccatggcacccatgtggcctcgatagcagc 438
               ||||||||||||||||||||||| | ||||||
Sbjct: 8714156 ggccatggcacccatgtggcctccacagcagc 8714125
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 403     caacggccatggcacccatgtggc 426
               ||||||||||||||||||||||||
Sbjct: 3197316 caacggccatggcacccatgtggc 3197339
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>dbj|AK110921.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D02, full
           insert sequence
          Length = 1280

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 407 ggccatggcacccatgtggcctcgatagcagc 438
           ||||||||||||||||||||||| | ||||||
Sbjct: 681 ggccatggcacccatgtggcctccacagcagc 712
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                               
Query: 407     ggccatggcacccatgtggcctcgatagcagc 438
               ||||||||||||||||||||||| | ||||||
Sbjct: 8784919 ggccatggcacccatgtggcctccacagcagc 8784888
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>emb|AL139254.23| Human DNA sequence from clone RP4-749H3 on chromosome 1p35.1-36 Contains
              a novel gene (LOC339505), complete sequence
          Length = 120455

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 103    gtcctgatgctggctccatccagctg 128
              ||||| ||||||||||||||||||||
Sbjct: 107151 gtcctcatgctggctccatccagctg 107176
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>gb|AC091957.2| Homo sapiens chromosome 5 clone RP11-43E4, complete sequence
          Length = 42724

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 99   ggtggtcctgatgctggctcca 120
            ||||||||||||||||||||||
Sbjct: 4769 ggtggtcctgatgctggctcca 4790
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>gb|AC010219.4|AC010219 Homo sapiens chromosome 5 clone CTC-251I16, complete sequence
          Length = 127922

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 99     ggtggtcctgatgctggctcca 120
              ||||||||||||||||||||||
Sbjct: 124220 ggtggtcctgatgctggctcca 124241
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>dbj|AP004533.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14G02, TM0080,
             complete sequence
          Length = 76730

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 314   tgcaacaacaagatcatcggtgcacg 339
             |||||||||||||||||||| |||||
Sbjct: 27158 tgcaacaacaagatcatcggggcacg 27183
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>gb|AC152884.1| Pan troglodytes chromosome 17 clone RP43-O52L01 map human ortholog
            17q21.33, complete sequence
          Length = 162327

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  atttggtcagagtcaccgagc 232
            |||||||||||||||||||||
Sbjct: 8126 atttggtcagagtcaccgagc 8106
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>ref|XM_811686.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053509331.90) partial mRNA
          Length = 933

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 135 actcacctcatctggcggcatgacg 159
           |||||||||||||||||||| ||||
Sbjct: 192 actcacctcatctggcggcacgacg 216
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>gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, complete sequence
          Length = 168585

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   ggccatggcacccatgtggcc 427
             |||||||||||||||||||||
Sbjct: 10536 ggccatggcacccatgtggcc 10516
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>emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, complete sequence
          Length = 164576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 407    ggccatggcacccatgtggcc 427
              |||||||||||||||||||||
Sbjct: 155837 ggccatggcacccatgtggcc 155817
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>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence
          Length = 157216

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   ggccatggcacccatgtggcc 427
             |||||||||||||||||||||
Sbjct: 59334 ggccatggcacccatgtggcc 59314
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>gb|AF435975.1| Homo sapiens dopamine- and cAMP-regulated neuronal phosphoprotein
             (PPP1R1B) gene, complete cds, alternatively spliced
          Length = 34765

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   ggccatggcacccatgtggcc 427
             |||||||||||||||||||||
Sbjct: 13932 ggccatggcacccatgtggcc 13912
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>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence
          Length = 175262

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 212    atttggtcagagtcaccgagc 232
              |||||||||||||||||||||
Sbjct: 130271 atttggtcagagtcaccgagc 130291
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>gb|AC008483.7| Homo sapiens chromosome 5 clone CTC-406I6, complete sequence
          Length = 152533

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 296  tccttcagccccaagagctgc 316
            |||||||||||||||||||||
Sbjct: 7645 tccttcagccccaagagctgc 7625
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 314     tgcaacaacaagatcatcggtgcacggtggtac 346
               |||||||  |||||||||||||| |||||||||
Sbjct: 9827687 tgcaacagaaagatcatcggtgcccggtggtac 9827655
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 403     caacggccatggcacccatgtggcc 427
               ||||||||| |||||||||||||||
Sbjct: 7870773 caacggccacggcacccatgtggcc 7870749
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>gb|AC010423.8| Homo sapiens chromosome 5 clone CTD-2193G5, complete sequence
          Length = 183787

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   tccttcagccccaagagctgc 316
             |||||||||||||||||||||
Sbjct: 87047 tccttcagccccaagagctgc 87067
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>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0521F09
          Length = 164823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 314  tgcaacaacaagatcatcggtgcacggtggtac 346
            |||||||  |||||||||||||| |||||||||
Sbjct: 8649 tgcaacagaaagatcatcggtgcccggtggtac 8617
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>dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0033K18
          Length = 138487

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 314    tgcaacaacaagatcatcggtgcacggtggtac 346
              |||||||  |||||||||||||| |||||||||
Sbjct: 136758 tgcaacagaaagatcatcggtgcccggtggtac 136726
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>gb|AC164620.5| Mus musculus BAC clone RP23-64H20 from chromosome 18, complete sequence
          Length = 182838

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tatttggtcagagtcaccga 230
             ||||||||||||||||||||
Sbjct: 67414 tatttggtcagagtcaccga 67395
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>ref|NM_187561.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2265

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 tgcaacaacaagatcatcgg 333
           ||||||||||||||||||||
Sbjct: 544 tgcaacaacaagatcatcgg 563
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>ref|NM_197437.1| Oryza sativa (japonica cultivar-group) putative serine protease
           (OSJNBa0096G08.24), mRNA
          Length = 2359

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 tgcaacaacaagatcatcgg 333
           ||||||||||||||||||||
Sbjct: 565 tgcaacaacaagatcatcgg 584
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>gb|AC100734.4| Mus musculus chromosome 15, clone RP24-316L11, complete sequence
          Length = 182088

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    tcaggtggtcctgatgctgg 115
             ||||||||||||||||||||
Sbjct: 10175 tcaggtggtcctgatgctgg 10194
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>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08
              map E1363S, complete sequence
          Length = 140681

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    tgcaacaacaagatcatcgg 333
              ||||||||||||||||||||
Sbjct: 133468 tgcaacaacaagatcatcgg 133449
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>gb|AC115045.13| Mus musculus chromosome 6, clone RP24-315D19, complete sequence
          Length = 177917

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     agacataactgaagttaagc 32
              ||||||||||||||||||||
Sbjct: 134149 agacataactgaagttaagc 134168
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     tgcaacaacaagatcatcgg 333
               ||||||||||||||||||||
Sbjct: 1015705 tgcaacaacaagatcatcgg 1015686
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>ref|XM_753130.1| Ustilago maydis 521 hypothetical protein (UM02076.1) partial mRNA
          Length = 2067

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgctggctccatccagctgc 129
           ||||||||||||||||||||
Sbjct: 709 tgctggctccatccagctgc 690
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>gb|AC125220.3| Mus musculus BAC clone RP23-70H20 from 15, complete sequence
          Length = 184933

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     tcaggtggtcctgatgctgg 115
              ||||||||||||||||||||
Sbjct: 104336 tcaggtggtcctgatgctgg 104317
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>emb|AL590036.11| Human DNA sequence from clone RP11-379D21 on chromosome 10 Contains an
              ADP-ribosylation factor-like 5 (ARL5) pseudogene, a
              ribosomal protein L7 (RPL7) pseudogene and part of the
              HPSE2 gene for heparanase 2, complete sequence
          Length = 197103

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     acttgacatccagatccagg 55
              ||||||||||||||||||||
Sbjct: 109614 acttgacatccagatccagg 109595
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>ref|XM_500438.1| Yarrowia lipolytica CLIB122, YALI0B02794g predicted mRNA
          Length = 957

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 404 aacggccatggcacccatgt 423
           ||||||||||||||||||||
Sbjct: 295 aacggccatggcacccatgt 314
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>emb|AL033375.2|HS21F7 Human DNA sequence from clone RP1-21F7 on chromosome 6q16.1-21 Contains
              the 5' end of the gene for a novel protein (KIAA1900) and a
              CpG island, complete sequence
          Length = 150789

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    gagtcaccgagcttcagtga 240
              ||||||||||||||||||||
Sbjct: 127160 gagtcaccgagcttcagtga 127141
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>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216116

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     agacataactgaagttaagc 32
              ||||||||||||||||||||
Sbjct: 210439 agacataactgaagttaagc 210420
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>dbj|AK016584.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932704I17 product:weakly similar to CDNA
            FLJ30932 FIS, CLONE FEBRA2006942, MODERATELY SIMILAR TO
            ZINC FINGER PROTEIN 33A [Homo sapiens], full insert
            sequence
          Length = 2920

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  cccacacatcagcttccatg 469
            ||||||||||||||||||||
Sbjct: 2256 cccacacatcagcttccatg 2275
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 314      tgcaacaacaagatcatcgg 333
                ||||||||||||||||||||
Sbjct: 19872430 tgcaacaacaagatcatcgg 19872411
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     tgcaacaacaagatcatcgg 333
               ||||||||||||||||||||
Sbjct: 1015703 tgcaacaacaagatcatcgg 1015684
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>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
              sequence
          Length = 116932

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    tgcaacaacaagatcatcgg 333
              ||||||||||||||||||||
Sbjct: 113613 tgcaacaacaagatcatcgg 113632
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>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11,
             complete sequence
          Length = 126827

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   tgcaacaacaagatcatcgg 333
             ||||||||||||||||||||
Sbjct: 35920 tgcaacaacaagatcatcgg 35901
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>dbj|AK069238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B10, full
           insert sequence
          Length = 2542

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 tgcaacaacaagatcatcgg 333
           ||||||||||||||||||||
Sbjct: 583 tgcaacaacaagatcatcgg 602
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>dbj|AK069220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012L19, full
           insert sequence
          Length = 2605

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 314 tgcaacaacaagatcatcgg 333
           ||||||||||||||||||||
Sbjct: 653 tgcaacaacaagatcatcgg 672
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>gb|AC102630.6| Mus musculus chromosome 1, clone RP23-473M13, complete sequence
          Length = 196529

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    gtggtcctgatgctggctcc 119
              ||||||||||||||||||||
Sbjct: 127715 gtggtcctgatgctggctcc 127734
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>gb|AC162941.5| Mus musculus BAC clone RP23-78N5 from chromosome 9, complete sequence
          Length = 230344

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   cccacacatcagcttccatg 469
             ||||||||||||||||||||
Sbjct: 37554 cccacacatcagcttccatg 37573
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 314      tgcaacaacaagatcatcgg 333
                ||||||||||||||||||||
Sbjct: 19883706 tgcaacaacaagatcatcgg 19883687
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    aacggccatggcacccatgt 423
              ||||||||||||||||||||
Sbjct: 419867 aacggccatggcacccatgt 419886
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>gb|AC154519.2| Mus musculus BAC clone RP23-216L13 from chromosome 9, complete sequence
          Length = 209719

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   cccacacatcagcttccatg 469
             ||||||||||||||||||||
Sbjct: 69851 cccacacatcagcttccatg 69832


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,188,209
Number of Sequences: 3902068
Number of extensions: 3188209
Number of successful extensions: 56315
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56005
Number of HSP's gapped (non-prelim): 310
length of query: 471
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 449
effective length of database: 17,147,199,772
effective search space: 7699092697628
effective search space used: 7699092697628
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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