ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191833.1| Oryza sativa (japonica cultivar-group), predic... 100 8e-18
2dbj|AK073926.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
4dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
5dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
6emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, co... 48 0.026
7gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, c... 46 0.10
8ref|XM_960326.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.41
9ref|XM_330219.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.41
10gb|AC183799.2| Pan troglodytes BAC clone CH251-329J7 from chromo... 44 0.41
11gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromo... 44 0.41
12gb|AC005049.2| Homo sapiens BAC clone CTB-23I15 from 7, complete... 44 0.41
13emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone ... 44 0.41
14gb|AC115108.2| Homo sapiens PAC clone RP5-1188A4 from 7, complet... 44 0.41
15gb|AC115107.3| Homo sapiens PAC clone RP5-1111K7 from 7, complet... 44 0.41
16gb|AC006014.3| Homo sapiens PAC clone RP5-953A4 from 7q11.23-q21... 44 0.41
17gb|AC115106.2| Homo sapiens PAC clone RP5-864I6 from 7, complete... 44 0.41
18gb|AC105418.5| Homo sapiens BAC clone RP11-450O3 from 7, complet... 44 0.41
19gb|AC005488.2| Homo sapiens BAC clone RP11-313P13 from 7, comple... 44 0.41
20ref|NM_146155.2| Mus musculus AT hook, DNA binding motif, contai... 42 1.6
21gb|AC121954.2| Mus musculus BAC clone RP24-218I17 from 6, comple... 42 1.6
22gb|BC042621.1| Mus musculus AT hook, DNA binding motif, containi... 42 1.6
23emb|BX927256.13| Zebrafish DNA sequence from clone CH211-272F14 ... 42 1.6
24emb|AL844157.5| Mouse DNA sequence from clone RP24-313C24 on chr... 42 1.6
25ref|NM_205004.1| Gallus gallus GDP dissociation inhibitor 2 (GDI... 42 1.6
26dbj|AK149347.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 42 1.6
27gb|AF416378.1|AF416378 Drosophila virilis defective chorion-1 fc... 42 1.6
28gb|AF416377.1|AF416377 Drosophila virilis defective chorion-1 fc... 42 1.6
29gb|AF416376.1|AF416376 Drosophila virilis defective chorion-1 fc... 42 1.6
30dbj|AK177785.1| Mus musculus cDNA, clone:Y0G0104D19, strand:plus... 42 1.6
31gb|AC153369.4| Mus musculus 10 BAC RP23-103E4 (Roswell Park Canc... 42 1.6
32gb|AF076291.1|AF076291 Gallus gallus Rab-GDP dissociation inhibi... 42 1.6
33ref|XM_524714.1| PREDICTED: Pan troglodytes similar to solute ca... 40 6.3
34ref|XM_417543.1| PREDICTED: Gallus gallus similar to KIAA1185 pr... 40 6.3
35gb|AC139751.2| Mus musculus BAC clone RP24-403E24 from chromosom... 40 6.3
36gb|AC007093.3| Homo sapiens BAC clone RP11-233F6 from 7, complet... 40 6.3
37emb|AL445487.8| Human DNA sequence from clone RP11-417L14 on chr... 40 6.3
38gb|AC097635.4| Homo sapiens chromosome 3 clone RP11-263O21, comp... 40 6.3
39gb|AY221003.1| Strongylocentrotus polyacanthus cytochrome oxidas... 40 6.3
40gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; ... 40 6.3
41gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell... 40 6.3
42gb|AC104182.2| Homo sapiens chromosome 3 clone RP11-141G23, comp... 40 6.3
43emb|CR352369.1| Gallus gallus finished cDNA, clone ChEST82d4 40 6.3
44dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
45gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 40 6.3
46gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
47emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112... 40 6.3
48gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, comple... 40 6.3
49emb|CT025659.7| Mouse DNA sequence from clone RP24-86F23 on chro... 40 6.3 
>ref|NM_191833.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 591

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 152/186 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 accaagatgtccacggctgggcatggccatggtggcagccagagctgcagccctggtgat 290
           ||||||||| |||||||| ||| | | |||||||||| | |||||||  |||||||||||
Sbjct: 93  accaagatggccacggctaggcgtcgtcatggtggcaactagagctgttgccctggtgat 152

                                                                       
Query: 291 ggctctgctctcagtgtcgctcatggtctccgccaagcaacggggcactctcgccatctt 350
           |||  |||||||| || | || ||| |||| |||||||| ||||| | ||||   |||||
Sbjct: 153 ggcagtgctctcaatggctctaatgatctctgccaagcagcggggtagtctcaagatctt 212

                                                                       
Query: 351 tggcatcgagattccactctatgccaaatggtccctctccgattccctgcaatccttggt 410
            ||||||||||| || || |||||||| |||||  |||| ||||||||  ||| ||||||
Sbjct: 213 cggcatcgagatcccgctttatgccaattggtctttctctgattccctagaatacttggt 272

                 
Query: 411 tgggat 416
           ||||||
Sbjct: 273 tgggat 278
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>dbj|AK073926.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073E17, full
           insert sequence
          Length = 914

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 152/186 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 accaagatgtccacggctgggcatggccatggtggcagccagagctgcagccctggtgat 290
           ||||||||| |||||||| ||| | | |||||||||| | |||||||  |||||||||||
Sbjct: 205 accaagatggccacggctaggcgtcgtcatggtggcaactagagctgttgccctggtgat 264

                                                                       
Query: 291 ggctctgctctcagtgtcgctcatggtctccgccaagcaacggggcactctcgccatctt 350
           |||  |||||||| || | || ||| |||| |||||||| ||||| | ||||   |||||
Sbjct: 265 ggcagtgctctcaatggctctaatgatctctgccaagcagcggggtagtctcaagatctt 324

                                                                       
Query: 351 tggcatcgagattccactctatgccaaatggtccctctccgattccctgcaatccttggt 410
            ||||||||||| || || |||||||| |||||  |||| ||||||||  ||| ||||||
Sbjct: 325 cggcatcgagatcccgctttatgccaattggtctttctctgattccctagaatacttggt 384

                 
Query: 411 tgggat 416
           ||||||
Sbjct: 385 tgggat 390



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 112 ccaggagcaacacggatgggctcctttgccaacggccagaatggttcggagcttggcatc 171
           ||||||||||||| |||||||||| ||| |||||||| |||||| |||||| ||||||| 
Sbjct: 98  ccaggagcaacactgatgggctccattggcaacggccggaatggctcggaggttggcata 157

               
Query: 172 caga 175
           ||||
Sbjct: 158 caga 161



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 ctagaatcctccaacctccccttc 33
          ||||||||||||||| ||||||||
Sbjct: 3  ctagaatcctccaacttccccttc 26
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 137/168 (81%)
 Strand = Plus / Plus

                                                                            
Query: 231      accaagatgtccacggctgggcatggccatggtggcagccagagctgcagccctggtgat 290
                ||||||||| |||||||| ||| | | |||||||||| | |||||||  |||||||||||
Sbjct: 30235414 accaagatggccacggctaggcgtcgtcatggtggcaactagagctgttgccctggtgat 30235473

                                                                            
Query: 291      ggctctgctctcagtgtcgctcatggtctccgccaagcaacggggcactctcgccatctt 350
                |||  |||||||| || | || ||| |||| |||||||| ||||| | ||||   |||||
Sbjct: 30235474 ggcagtgctctcaatggctctaatgatctctgccaagcagcggggtagtctcaagatctt 30235533

                                                                
Query: 351      tggcatcgagattccactctatgccaaatggtccctctccgattccct 398
                 ||||||||||| || || |||||||| |||||  |||| ||||||||
Sbjct: 30235534 cggcatcgagatcccgctttatgccaattggtctttctctgattccct 30235581



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                            
Query: 112      ccaggagcaacacggatgggctcctttgccaacggccagaatggttcggagcttggcatc 171
                ||||||||||||| |||||||||| ||| |||||||| |||||| |||||| ||||||| 
Sbjct: 30235307 ccaggagcaacactgatgggctccattggcaacggccggaatggctcggaggttggcata 30235366

                    
Query: 172      caga 175
                ||||
Sbjct: 30235367 caga 30235370



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 10       ctagaatcctccaacctccccttc 33
                ||||||||||||||| ||||||||
Sbjct: 30235212 ctagaatcctccaacttccccttc 30235235
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>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0042A10
          Length = 146840

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 137/168 (81%)
 Strand = Plus / Plus

                                                                         
Query: 231   accaagatgtccacggctgggcatggccatggtggcagccagagctgcagccctggtgat 290
             ||||||||| |||||||| ||| | | |||||||||| | |||||||  |||||||||||
Sbjct: 23733 accaagatggccacggctaggcgtcgtcatggtggcaactagagctgttgccctggtgat 23792

                                                                         
Query: 291   ggctctgctctcagtgtcgctcatggtctccgccaagcaacggggcactctcgccatctt 350
             |||  |||||||| || | || ||| |||| |||||||| ||||| | ||||   |||||
Sbjct: 23793 ggcagtgctctcaatggctctaatgatctctgccaagcagcggggtagtctcaagatctt 23852

                                                             
Query: 351   tggcatcgagattccactctatgccaaatggtccctctccgattccct 398
              ||||||||||| || || |||||||| |||||  |||| ||||||||
Sbjct: 23853 cggcatcgagatcccgctttatgccaattggtctttctctgattccct 23900



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                         
Query: 112   ccaggagcaacacggatgggctcctttgccaacggccagaatggttcggagcttggcatc 171
             ||||||||||||| |||||||||| ||| |||||||| |||||| |||||| ||||||| 
Sbjct: 23626 ccaggagcaacactgatgggctccattggcaacggccggaatggctcggaggttggcata 23685

                 
Query: 172   caga 175
             ||||
Sbjct: 23686 caga 23689



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    ctagaatcctccaacctccccttc 33
             ||||||||||||||| ||||||||
Sbjct: 23531 ctagaatcctccaacttccccttc 23554
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>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0022F10
          Length = 150498

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 137/168 (81%)
 Strand = Plus / Plus

                                                                          
Query: 231    accaagatgtccacggctgggcatggccatggtggcagccagagctgcagccctggtgat 290
              ||||||||| |||||||| ||| | | |||||||||| | |||||||  |||||||||||
Sbjct: 140236 accaagatggccacggctaggcgtcgtcatggtggcaactagagctgttgccctggtgat 140295

                                                                          
Query: 291    ggctctgctctcagtgtcgctcatggtctccgccaagcaacggggcactctcgccatctt 350
              |||  |||||||| || | || ||| |||| |||||||| ||||| | ||||   |||||
Sbjct: 140296 ggcagtgctctcaatggctctaatgatctctgccaagcagcggggtagtctcaagatctt 140355

                                                              
Query: 351    tggcatcgagattccactctatgccaaatggtccctctccgattccct 398
               ||||||||||| || || |||||||| |||||  |||| ||||||||
Sbjct: 140356 cggcatcgagatcccgctttatgccaattggtctttctctgattccct 140403



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                          
Query: 112    ccaggagcaacacggatgggctcctttgccaacggccagaatggttcggagcttggcatc 171
              ||||||||||||| |||||||||| ||| |||||||| |||||| |||||| ||||||| 
Sbjct: 140129 ccaggagcaacactgatgggctccattggcaacggccggaatggctcggaggttggcata 140188

                  
Query: 172    caga 175
              ||||
Sbjct: 140189 caga 140192



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     ctagaatcctccaacctccccttc 33
              ||||||||||||||| ||||||||
Sbjct: 140034 ctagaatcctccaacttccccttc 140057
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>emb|BX248355.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              2/8
          Length = 341553

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 212    ccacaacatctgctgcagcaccaa 235
              ||||||||||||||||||||||||
Sbjct: 220366 ccacaacatctgctgcagcaccaa 220343
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>gb|AC129563.14| Mus musculus chromosome 15, clone RP23-223M20, complete sequence
          Length = 175021

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 278    cagccctggtgatggctctgctctcag 304
              ||||||||| |||||||||||||||||
Sbjct: 112609 cagccctggcgatggctctgctctcag 112635
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>ref|XM_960326.1| Neurospora crassa OR74A hypothetical protein (NCU03033.1) partial
           mRNA
          Length = 945

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 261 ggtggcagccagagctgcagcc 282
           ||||||||||||||||||||||
Sbjct: 264 ggtggcagccagagctgcagcc 243
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>ref|XM_330219.1| Neurospora crassa OR74A hypothetical protein (NCU03033.1) partial
           mRNA
          Length = 945

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 261 ggtggcagccagagctgcagcc 282
           ||||||||||||||||||||||
Sbjct: 264 ggtggcagccagagctgcagcc 243
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>gb|AC183799.2| Pan troglodytes BAC clone CH251-329J7 from chromosome 7, complete
              sequence
          Length = 174044

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 246    gctgggcatggccatggtggca 267
              ||||||||||||||||||||||
Sbjct: 162787 gctgggcatggccatggtggca 162808
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>gb|AC183830.2| Pan troglodytes BAC clone CH251-267I9 from chromosome 7, complete
             sequence
          Length = 157720

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 98908 gctgggcatggccatggtggca 98887
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>gb|AC005049.2| Homo sapiens BAC clone CTB-23I15 from 7, complete sequence
          Length = 106928

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 57231 gctgggcatggccatggtggca 57210
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>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24
          Length = 75337

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   ggtggcagccagagctgcagcc 282
             ||||||||||||||||||||||
Sbjct: 20146 ggtggcagccagagctgcagcc 20125
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>gb|AC115108.2| Homo sapiens PAC clone RP5-1188A4 from 7, complete sequence
          Length = 108048

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 62986 gctgggcatggccatggtggca 62965
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>gb|AC115107.3| Homo sapiens PAC clone RP5-1111K7 from 7, complete sequence
          Length = 102479

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 97025 gctgggcatggccatggtggca 97004
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>gb|AC006014.3| Homo sapiens PAC clone RP5-953A4 from 7q11.23-q21.1, complete sequence
          Length = 127761

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 69535 gctgggcatggccatggtggca 69514
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>gb|AC115106.2| Homo sapiens PAC clone RP5-864I6 from 7, complete sequence
          Length = 117051

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 66906 gctgggcatggccatggtggca 66885
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>gb|AC105418.5| Homo sapiens BAC clone RP11-450O3 from 7, complete sequence
          Length = 195834

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 246   gctgggcatggccatggtggca 267
             ||||||||||||||||||||||
Sbjct: 12824 gctgggcatggccatggtggca 12845
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>gb|AC005488.2| Homo sapiens BAC clone RP11-313P13 from 7, complete sequence
          Length = 185737

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 246    gctgggcatggccatggtggca 267
              ||||||||||||||||||||||
Sbjct: 115802 gctgggcatggccatggtggca 115823
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>ref|NM_146155.2| Mus musculus AT hook, DNA binding motif, containing 1 (Ahdc1), mRNA
          Length = 5729

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  gggcatggccatggtggcagc 269
            |||||||||||||||||||||
Sbjct: 2376 gggcatggccatggtggcagc 2356
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>gb|AC121954.2| Mus musculus BAC clone RP24-218I17 from 6, complete sequence
          Length = 182855

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 65     aaggaaaaacagcataggcaa 85
              |||||||||||||||||||||
Sbjct: 152303 aaggaaaaacagcataggcaa 152283
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>gb|BC042621.1| Mus musculus AT hook, DNA binding motif, containing 1, mRNA (cDNA
            clone MGC:30523 IMAGE:4911638), complete cds
          Length = 5729

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  gggcatggccatggtggcagc 269
            |||||||||||||||||||||
Sbjct: 2376 gggcatggccatggtggcagc 2356
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>emb|BX927256.13| Zebrafish DNA sequence from clone CH211-272F14 in linkage group 5,
             complete sequence
          Length = 130184

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    caccaccgctgctaaaaaggaaaaa 73
             |||||||| ||||||||||||||||
Sbjct: 51952 caccaccggtgctaaaaaggaaaaa 51928
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>emb|AL844157.5| Mouse DNA sequence from clone RP24-313C24 on chromosome 4 Contains a
              novel peudogene and a CpG island, complete sequence
          Length = 156075

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 270    cagagctgcagccctggtgat 290
              |||||||||||||||||||||
Sbjct: 128306 cagagctgcagccctggtgat 128326
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>ref|NM_205004.1| Gallus gallus GDP dissociation inhibitor 2 (GDI2), mRNA
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  caacctccccttcagacttca 41
           |||||||||||||||||||||
Sbjct: 933 caacctccccttcagacttca 913
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>dbj|AK149347.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930035E22 product:hypothetical HMG-I and HMG-Y
            DNA-binding domain (A+T-hook)/Proline-rich region profile
            containing protein, full insert sequence
          Length = 3750

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  gggcatggccatggtggcagc 269
            |||||||||||||||||||||
Sbjct: 2520 gggcatggccatggtggcagc 2500
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>gb|AF416378.1|AF416378 Drosophila virilis defective chorion-1 fc125 protein precursor
           (dec-1) mRNA, complete cds, alternatively spliced
          Length = 3726

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 416 tatccgcggcggcagctgcct 436
           |||||||||||||||||||||
Sbjct: 115 tatccgcggcggcagctgcct 95
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>gb|AF416377.1|AF416377 Drosophila virilis defective chorion-1 fc106 protein precursor
           (dec-1) mRNA, complete cds, alternatively spliced
          Length = 3740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 416 tatccgcggcggcagctgcct 436
           |||||||||||||||||||||
Sbjct: 115 tatccgcggcggcagctgcct 95
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>gb|AF416376.1|AF416376 Drosophila virilis defective chorion-1 fc177 protein precursor
           (dec-1) mRNA, complete cds, alternatively spliced
          Length = 5216

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 416 tatccgcggcggcagctgcct 436
           |||||||||||||||||||||
Sbjct: 115 tatccgcggcggcagctgcct 95
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>dbj|AK177785.1| Mus musculus cDNA, clone:Y0G0104D19, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000066971, based on BLAT search
          Length = 330

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 391 gattccctgcaatccttggtt 411
           |||||||||||||||||||||
Sbjct: 211 gattccctgcaatccttggtt 231
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>gb|AC153369.4| Mus musculus 10 BAC RP23-103E4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197003

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    catcaccaccgctgctaaaaa 66
             |||||||||||||||||||||
Sbjct: 71332 catcaccaccgctgctaaaaa 71312
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>gb|AF076291.1|AF076291 Gallus gallus Rab-GDP dissociation inhibitor mRNA, complete cds
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 21  caacctccccttcagacttca 41
           |||||||||||||||||||||
Sbjct: 933 caacctccccttcagacttca 913
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>ref|XM_524714.1| PREDICTED: Pan troglodytes similar to solute carrier family 1
            (glutamate transporter), member 7; excitatory amino acid
            transporter 5 (retinal glutamate transporter)
            (LOC469329), mRNA
          Length = 2436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 245  ggctgggcatggccatggtggcag 268
            |||||| |||||||||||||||||
Sbjct: 1366 ggctggtcatggccatggtggcag 1343
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>ref|XM_417543.1| PREDICTED: Gallus gallus similar to KIAA1185 protein (LOC419380),
           mRNA
          Length = 2556

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 cggggagcaacgcggcgctg 204
           ||||||||||||||||||||
Sbjct: 156 cggggagcaacgcggcgctg 137
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>gb|AC139751.2| Mus musculus BAC clone RP24-403E24 from chromosome 17, complete
            sequence
          Length = 183224

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  catcgagattccactctatg 373
            ||||||||||||||||||||
Sbjct: 9991 catcgagattccactctatg 9972
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>gb|AC007093.3| Homo sapiens BAC clone RP11-233F6 from 7, complete sequence
          Length = 27182

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   aaaacagcataggcaaaaac 89
            ||||||||||||||||||||
Sbjct: 1443 aaaacagcataggcaaaaac 1424
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>emb|AL445487.8| Human DNA sequence from clone RP11-417L14 on chromosome 9 Contains a
             karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
             (KPNA2) pseudogene, complete sequence
          Length = 112031

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   tggtgatggctctgctctca 303
             ||||||||||||||||||||
Sbjct: 55020 tggtgatggctctgctctca 55001
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>gb|AC097635.4| Homo sapiens chromosome 3 clone RP11-263O21, complete sequence
          Length = 164454

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    taaaaaggaaaaacagcata 80
             ||||||||||||||||||||
Sbjct: 29343 taaaaaggaaaaacagcata 29324
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>gb|AY221003.1| Strongylocentrotus polyacanthus cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 441

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 62  aaaaaggaaaaacagcatag 81
           ||||||||||||||||||||
Sbjct: 360 aaaaaggaaaaacagcatag 341
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>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1
             genes, complete cds; and c12.2 gene, partial cds
          Length = 45142

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaaaaggaaaaacagcatag 81
             ||||||||||||||||||||
Sbjct: 29856 aaaaaggaaaaacagcatag 29875
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>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    aaaaaggaaaaacagcatag 81
             ||||||||||||||||||||
Sbjct: 65639 aaaaaggaaaaacagcatag 65620
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>gb|AC104182.2| Homo sapiens chromosome 3 clone RP11-141G23, complete sequence
          Length = 156818

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     taaaaaggaaaaacagcata 80
              ||||||||||||||||||||
Sbjct: 104061 taaaaaggaaaaacagcata 104042
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>emb|CR352369.1| Gallus gallus finished cDNA, clone ChEST82d4
          Length = 1150

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 185  cggggagcaacgcggcgctg 204
            ||||||||||||||||||||
Sbjct: 1016 cggggagcaacgcggcgctg 997
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 222      tgctgcagcaccaagatgtc 241
                ||||||||||||||||||||
Sbjct: 14448457 tgctgcagcaccaagatgtc 14448476
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     aaaaaggaaaaacagcatag 81
              ||||||||||||||||||||
Sbjct: 258082 aaaaaggaaaaacagcatag 258101
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 222      tgctgcagcaccaagatgtc 241
                ||||||||||||||||||||
Sbjct: 14402741 tgctgcagcaccaagatgtc 14402760
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>emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC OJ1112_B07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 118101

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   tgctgcagcaccaagatgtc 241
             ||||||||||||||||||||
Sbjct: 68835 tgctgcagcaccaagatgtc 68816
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>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence
          Length = 179548

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    tcaccaccgctgctaaaaaggaaa 71
             ||||||||||||| ||||||||||
Sbjct: 87378 tcaccaccgctgccaaaaaggaaa 87355
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>emb|CT025659.7| Mouse DNA sequence from clone RP24-86F23 on chromosome 17, complete
             sequence
          Length = 183855

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   catcgagattccactctatg 373
             ||||||||||||||||||||
Sbjct: 44414 catcgagattccactctatg 44433


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,406,099
Number of Sequences: 3902068
Number of extensions: 4406099
Number of successful extensions: 91105
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90944
Number of HSP's gapped (non-prelim): 161
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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