Clone Name | bastl53e01 |
---|---|
Clone Library Name | barley_pub |
>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4| (Signal-responsive protein 5) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (AtFIN21) Length = 1016 Score = 73.2 bits (178), Expect(2) = 2e-16 Identities = 35/60 (58%), Positives = 43/60 (71%) Frame = +1 Query: 199 TRWLKLREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGRA 378 +RWLK EVL ILQN E + N PQRP SGS LFN+RV +FFR DG+ W++K+ GRA Sbjct: 47 SRWLKPPEVLFILQNHESLTLTNTAPQRPTSGSLLLFNKRVLKFFRKDGHQWRRKRDGRA 106 Score = 30.8 bits (68), Expect(2) = 2e-16 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 Query: 360 KENGKSGHESHEYLKVDNVKALNC 431 K +G++ E+HE LKV N +ALNC Sbjct: 101 KRDGRAIAEAHERLKVGNAEALNC 124
>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2| (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) Length = 1050 Score = 70.9 bits (172), Expect(2) = 4e-15 Identities = 31/58 (53%), Positives = 43/58 (74%) Frame = +1 Query: 202 RWLKLREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGR 375 RWL+ E+ +IL+N + F I + P RPPSGS FLF+R+V R+FR DG+ W+KKK G+ Sbjct: 25 RWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82 Score = 28.5 bits (62), Expect(2) = 4e-15 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 357 EKENGKSGHESHEYLKVDNVKALNC 431 +K++GK+ E+HE LKV ++ L+C Sbjct: 77 KKKDGKTVKEAHEKLKVGSIDVLHC 101
>CMTA1_ARATH (Q9FY74) Calmodulin-binding transcription activator 1| (Signal-responsive protein 2) (Ethylene-induced calmodulin-binding protein b) (EICBP.b) Length = 1007 Score = 68.6 bits (166), Expect(2) = 2e-14 Identities = 31/58 (53%), Positives = 42/58 (72%) Frame = +1 Query: 202 RWLKLREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGR 375 RWL+ E+ +ILQN F I + +P RP SGS FLF+R+V R+FR DG+ W+KKK G+ Sbjct: 28 RWLRPTEICEILQNYHKFHIASESPTRPASGSLFLFDRKVLRYFRKDGHNWRKKKDGK 85 Score = 28.5 bits (62), Expect(2) = 2e-14 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 357 EKENGKSGHESHEYLKVDNVKALNC 431 +K++GK+ E+HE LKV ++ L+C Sbjct: 80 KKKDGKTIREAHEKLKVGSIDVLHC 104
>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3| (Signal-responsive protein 1) (Ethylene-induced calmodulin-binding protein a) (EICBP.a) (Ethylene-induced calmodulin-binding protein 1) (EICBP1) Length = 1032 Score = 65.9 bits (159), Expect(2) = 3e-13 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +1 Query: 196 RTRWLKLREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGR 375 R RWL+ E+ +ILQN + F I P P SGS F+F+R+V R+FR DG+ W+KKK G+ Sbjct: 23 RHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMFDRKVLRYFRKDGHNWRKKKDGK 82 Score = 27.3 bits (59), Expect(2) = 3e-13 Identities = 11/25 (44%), Positives = 18/25 (72%) Frame = +3 Query: 357 EKENGKSGHESHEYLKVDNVKALNC 431 +K++GK+ E+HE LK +V L+C Sbjct: 77 KKKDGKTVKEAHERLKAGSVDVLHC 101
>CMTA5_ARATH (O23463) Calmodulin-binding transcription activator 5| (Signal-responsive protein 6) (Ethylene-induced calmodulin-binding protein f) (EICBP.f) Length = 923 Score = 50.8 bits (120), Expect(2) = 2e-08 Identities = 24/59 (40%), Positives = 38/59 (64%) Frame = +1 Query: 199 TRWLKLREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGR 375 +RWL+ E+ +L N + F I+ + P SG+ LF+R++ R FR DG+ W+KKK G+ Sbjct: 34 SRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGK 92 Score = 25.8 bits (55), Expect(2) = 2e-08 Identities = 10/24 (41%), Positives = 19/24 (79%) Frame = +3 Query: 357 EKENGKSGHESHEYLKVDNVKALN 428 +K++GK+ E+HE+LKV N + ++ Sbjct: 87 KKKDGKTIKEAHEHLKVGNEERIH 110
>CMTA6_ARATH (Q9LSP8) Calmodulin-binding transcription activator 6| (Signal-responsive protein 3) (Ethylene-induced calmodulin-binding protein e) (EICBP.e) (Ethylene-induced calmodulin-binding protein 5) (EICBP5) Length = 838 Score = 35.8 bits (81), Expect(2) = 8e-04 Identities = 21/60 (35%), Positives = 30/60 (50%) Frame = +1 Query: 196 RTRWLKLREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGR 375 ++RWL+ E+ IL G LF+R++ R FR DG+ W+KKK GR Sbjct: 33 KSRWLRPNEIHAIL-----------------CGRIILFDRKMLRNFRKDGHNWKKKKDGR 75 Score = 25.0 bits (53), Expect(2) = 8e-04 Identities = 9/24 (37%), Positives = 19/24 (79%) Frame = +3 Query: 357 EKENGKSGHESHEYLKVDNVKALN 428 +K++G++ E+HE+LKV N + ++ Sbjct: 70 KKKDGRTVKEAHEHLKVGNEERIH 93
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 36.6 bits (83), Expect(2) = 0.006 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Frame = +1 Query: 196 RTRWLKLREVLDIL----QNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKK 363 R RW E+ L ++ E +T RP +GS L+NR+ ++ R DGY+W+K+ Sbjct: 38 RLRWNTNEEIASYLITFEKHDEWLSCAPKT--RPQNGSIILYNRKKVKY-RKDGYLWKKR 94 Query: 364 KMGR 375 K G+ Sbjct: 95 KDGK 98 Score = 21.2 bits (43), Expect(2) = 0.006 Identities = 8/23 (34%), Positives = 15/23 (65%) Frame = +3 Query: 357 EKENGKSGHESHEYLKVDNVKAL 425 ++++GK+ E H LKV ++ L Sbjct: 93 KRKDGKTTREDHMKLKVQGMECL 115
>CMTA2_MOUSE (Q80Y50) Calmodulin-binding transcription activator 2| Length = 1208 Score = 36.6 bits (83), Expect = 0.027 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%) Frame = +1 Query: 196 RTRWLKLREVLDIL----QNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVWQKK 363 R RW E+ L ++ E +T RP +GS L+NR+ ++ R DGY+W+K+ Sbjct: 38 RLRWNTNEEIASYLITFEKHDEWLSCAPKT--RPQNGSIILYNRKKVKY-RKDGYLWKKR 94 Query: 364 KMGR 375 K G+ Sbjct: 95 KDGK 98
>CMTA1_HUMAN (Q9Y6Y1) Calmodulin-binding transcription activator 1| Length = 1673 Score = 35.8 bits (81), Expect = 0.045 Identities = 15/32 (46%), Positives = 23/32 (71%) Frame = +1 Query: 280 RPPSGSWFLFNRRVHRFFRNDGYVWQKKKMGR 375 RP +GS L+NR+ ++ R DGY W+K+K G+ Sbjct: 101 RPQNGSMILYNRKKVKY-RKDGYCWKKRKDGK 131
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 31.6 bits (70), Expect = 0.85 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAG 12 P N +G P+G +GG+G + P PP + G S AG Sbjct: 530 PDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAG 571
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAG 12 P N +G P+G +GG+G + P PP + G S AG Sbjct: 524 PDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGPAG 565
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 P+ G P G +G G P PP R R GE+ AG P Sbjct: 1090 PSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPP 1133
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 P+ G P G +G G P PP R R GE+ AG P Sbjct: 1091 PSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPAGPP 1134
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 30.4 bits (67), Expect = 1.9 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPP 51 P N +G P+G +GG+G + P PP Sbjct: 530 PDGNNGAQGPPGPQGVQGGKGEQGPAGPP 558
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 30.4 bits (67), Expect = 1.9 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPP 51 P N +G P+G +GG+G + P PP Sbjct: 524 PDGNNGAQGPPGPQGVQGGKGEQGPAGPP 552
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -3 Query: 125 NSGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 N GE G + P G G G E P+ PP R GE G P Sbjct: 707 NPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLP 747
>CO2A1_CHICK (P02460) Collagen alpha-1(II) chain precursor (Fragment)| Length = 369 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 P+ G P G +G G P PP R R GE AG P Sbjct: 41 PSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPP 84
>KRA54_HUMAN (Q6L8H1) Keratin-associated protein 5-4 (Keratin-associated protein| 5.4) (Ultrahigh sulfur keratin-associated protein 5.4) Length = 288 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Frame = +2 Query: 230 IYCRIPSCSGSTIGPLRGHRVVLGFF--STEGCIASSGMMGMCG 355 + C +P+CS S+ G G + G S GC++ G G CG Sbjct: 59 VCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCG 102
>SKI2_YEAST (P35207) Antiviral helicase SKI2 (EC 3.6.1.-)| Length = 1287 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -3 Query: 140 APASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*G 30 AP+ T++G G RGG GG T + TR G Sbjct: 548 APSKTDNGRGGSTARGGRGGSNTRDGRGGRGNSTRGG 584
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/44 (34%), Positives = 18/44 (40%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 P+ G P G +G G P PP R R GE+ G P Sbjct: 1131 PSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPVGPP 1174
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 28.9 bits (63), Expect = 5.5 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -3 Query: 125 NSGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 N GE G + P G G G E P+ PP R GE G P Sbjct: 707 NPGEPGLRGPEGIRGLPGVEGPRGPPGPRGMQGEQGATGLP 747
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 28.9 bits (63), Expect = 5.5 Identities = 16/44 (36%), Positives = 17/44 (38%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 PA G P G +G G P PP R GE GSP Sbjct: 979 PAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGNRGERGSEGSP 1022
>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor| Length = 1356 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/43 (41%), Positives = 21/43 (48%) Frame = -3 Query: 134 ASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 AS SG G K PRG +G G PQ P + G +AG P Sbjct: 20 ASCQSG-GLKGPRGAKGPRGDRGPQGPNGRDGKAGLPGIAGPP 61
>DMI1_ORYSA (Q5N941) Putative ion channel DMI1, chloroplast precursor| Length = 965 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 122 SGEGTKNPRGGEGGEGTEYPQAPP 51 S G +P GG GGEG+ P+ PP Sbjct: 4 SDGGEASPSGGGGGEGSPDPRRPP 27
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = -3 Query: 119 GEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 G G P+G G GT PP + GE +AG+P Sbjct: 733 GHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTP 770
>SNTB2_MOUSE (Q61235) Beta-2-syntrophin (59 kDa dystrophin-associated protein| A1, basic component 2) (Syntrophin 3) (SNT3) (Syntrophin-like) (SNTL) Length = 520 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 1 GGGDPAIQDSPHLVLVLGGACGYSVPSPPSPPRG 102 GGG ++ SP+ G PSPP+PPRG Sbjct: 57 GGGGESLPGSPNR--------GLGPPSPPAPPRG 82
>SYN_XYLFT (Q87A82) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 214 LREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVW 354 LREV + + LFG R ++ VHRFF +GY W Sbjct: 121 LREVAHLRPRTNLFGAVARIRH--------CLSQAVHRFFHENGYYW 159
>SYN_XYLFA (Q9PAF5) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 214 LREVLDILQNSELFGIHNRTPQRPPSGSWFLFNRRVHRFFRNDGYVW 354 LREV + + LFG R ++ VHRFF +GY W Sbjct: 121 LREVAHLRPRTNLFGAVARIRH--------CLSQAVHRFFHENGYYW 159
>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1575 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 22 QDSPHLVLVLGGACGYSVPSPPSPPRGFLVPSPE 123 Q SP L G GYS P PPR ++ +P+ Sbjct: 1176 QPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQ 1209
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/44 (36%), Positives = 17/44 (38%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 PA G P G +G G P PP R GE GSP Sbjct: 1134 PAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGERGSEGSP 1177
>V06_BPT7 (P03778) Protein 0.6B [Contains: Protein 0.6A]| Length = 111 Score = 28.1 bits (61), Expect = 9.4 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 286 PSGSWFLFNRRVHRFFRNDGYVWQKKKMGRAGTNPMSTLR 405 P+G+ + NRR+ R +R + +K K GR G + L+ Sbjct: 62 PNGTLYAANRRIVRTWRENNLERRKDKRGRRGIDERKRLK 101
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/44 (36%), Positives = 17/44 (38%) Frame = -3 Query: 137 PASTNSGEGTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 PA G P G +G G P PP R GE GSP Sbjct: 1135 PAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSP 1178
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -3 Query: 125 NSGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 N GE G + P G G G E P+ PP R GE G P Sbjct: 111 NPGEPGLRGPEGIRGLPGVEGPRGPPGPRGVQGEQGATGLP 151
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = -3 Query: 122 SGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 SGE G + P G G G P PP GES GSP Sbjct: 968 SGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSP 1007
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%) Frame = -3 Query: 122 SGE-GTKNPRGGEGGEGTEYPQAPPRTRTR*GES*MAGSP 6 SGE G + P G G G P PP GES GSP Sbjct: 968 SGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSP 1007 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,948,788 Number of Sequences: 219361 Number of extensions: 1148045 Number of successful extensions: 5393 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4465 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5368 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)