Clone Name | bastl53d12 |
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Clone Library Name | barley_pub |
>GALT3_CAEEL (P34678) Polypeptide N-acetylgalactosaminyltransferase 3 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 3) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 3) (pp-GaNTase 3) (GalNAc-T1) Length = 612 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/59 (28%), Positives = 26/59 (44%) Frame = -2 Query: 375 PITVIVSINXLGCQTASASTWNQKTRASSFSWKTVRRIDAPGGGEDRGCELAARGVAGG 199 PI ++S + TAS +TW +F W V + + G DR + +AGG Sbjct: 290 PIIDVISDDTFEYVTASETTWGGFNWHLNFRWYAVPKRELNRRGSDRSMPIQTPTIAGG 348
>TBX18_HUMAN (O95935) T-box transcription factor TBX18 (T-box protein 18)| Length = 607 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -2 Query: 261 DAPGGGEDRGCELAARGVAGGEEGPARSNHGSHLPQPLSA 142 +A G +D GC +RG GE+G + + G+ LP P A Sbjct: 45 EAAGAVDDGGC---SRGGGAGEKGSSEGDEGAALPPPAGA 81
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 30.8 bits (68), Expect = 1.6 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = -1 Query: 184 ALQPWQPSPSTSQRG---VPLLLRARRKPSRGAKSPS 83 A+ PW+PSPS ++ VP+L + KPS SPS Sbjct: 75 AIAPWEPSPSPTETAWTVVPVLKSSALKPSTVQFSPS 111
>SSH2_MOUSE (Q5SW75) Protein phosphatase Slingshot homolog 2 (EC 3.1.3.48) (EC| 3.1.3.16) (SSH-2L) (mSSH-2L) Length = 1423 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = -2 Query: 312 NQKTRASSFSWKTVRRIDAPGGGEDRGCELAARGVAGGE 196 +Q+TR+ SFS RI+ GGG GC L+ VA E Sbjct: 663 SQETRSRSFSHS---RIEELGGGRSEGCRLSVIEVAASE 698
>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1| (PRAX-1) (Peripheral benzodiazepine receptor-interacting protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1) Length = 1857 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 187 RALLAARYSPRGELAAAILSPARRVDSPHSLPAERGCP 300 R ++ SP GE A +I +P +P SLPA CP Sbjct: 1053 REVVVRTMSPHGESADSIPAPITPALAPASLPARVSCP 1090
>GSHB_BRAJU (O23732) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3)| (Glutathione synthase) (GSH synthetase) (GSH-S) Length = 530 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 352 DGDYHRDWGVQNAGSYGGESRSNTRLIIS 438 DG YH+D + G YG R+ R+II+ Sbjct: 470 DGVYHKDQAISELGVYGAYLRNKERVIIN 498
>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6| Length = 704 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%) Frame = -2 Query: 261 DAPGGGEDRGCELAARGVAGGE---EGPARSNHGSHLPQ 154 +A GGG DRG E ARG G E + G+ +PQ Sbjct: 59 EAGGGGPDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQ 97
>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = -1 Query: 175 PWQPSPSTSQRGVPLLLR----ARRKPSRGAKSPSRQ 77 P QPSP+T+ V L+ A RKP R + SP Q Sbjct: 140 PQQPSPATTPSAVQFFLQEDEGAERKPERTSPSPPTQ 176
>PAP2_ORYSA (Q6K439) Probable plastid-lipid-associated protein 2, chloroplast| precursor (Fibrillin-like protein 2) Length = 319 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 292 GCPRFLVPRRGAGSLASEXIDGDYHRDWGVQNAGSYGG 405 G PRF R L + + GD +WG + A GG Sbjct: 37 GAPRFPTLRAAPRRLTARAVAGDAEDEWGKEPAADQGG 74
>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting| protein) Length = 510 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +1 Query: 232 AAILSPARRVDSPHSLPAERGCPRFLVPRRGAGSLASE 345 AA++S RR P + P ERG P VP R A + S+ Sbjct: 96 AAVVSLLRRFSLPPTAPGERGTP--AVPARAAAARCSQ 131
>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) (HEP) Length = 1006 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 7/44 (15%) Frame = -2 Query: 240 DRGCELAARGVAGGEEG-------PARSNHGSHLPQPLSAACPC 130 D+ C+ RG+ G PARS H P P + CPC Sbjct: 296 DKACQACPRGLYKSSAGNAPCSPCPARS----HAPNPAAPVCPC 335 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,663,278 Number of Sequences: 219361 Number of extensions: 990030 Number of successful extensions: 3339 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3338 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)