>MSC1_SCHPO (Q9UT79) Multicopy suppressor of chk1 protein 1|
          Length = 1588

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
 Frame = -3

Query: 379 CLQDLLTSDG--SSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGRR 206
           C+   L S    +S ++KQ L   L+  PLT  S T+      +   RRT +TS   G  
Sbjct: 358 CISSFLQSSNELASSLKKQ-LPSFLAQTPLTLPSNTKTPPASARQSSRRTRSTS-GKGFE 415

Query: 205 TRTGVPCQS----LRKLSP-----WVLSLPLSFTSSAP------QLPTPPIRGSVERRSS 71
           T+  +   S    L  LSP     W  S P + ++S+P       LPT P+ G     ++
Sbjct: 416 TKISINLDSDIKLLNTLSPLETFFWCCSFPSTASTSSPFSYYPESLPT-PLLGRAVNTTA 474

Query: 70  VPTS 59
            PTS
Sbjct: 475 FPTS 478

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 21/61 (34%), Positives = 26/61 (42%)
 Frame = -3

Query: 241 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPT 62
           R TTT     RRT T  P +  ++ +    S   S TSS     T PI  S    S + T
Sbjct: 424 RRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVT 483

Query: 61  S 59
           S
Sbjct: 484 S 484

>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 464

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 201 GQVSPVNHSGSYHHGCFRCLFLSPPQPLNCLR 106
           GQ++  NH+G     C+RCLF +PP    C R
Sbjct: 219 GQLTVYNHNGG---PCYRCLFPTPPPTSACQR 247

>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene AF4)|
            (FEL protein)
          Length = 1210

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 12/103 (11%)
 Frame = -3

Query: 298  LTPISRTQPASLWGQGLRRRTTTTSLAV---GRRTRTGVPCQSLRKLSPW---------V 155
            L P++ +Q     G G R      ++ V    R+ R  +P +  + LSP          +
Sbjct: 703  LVPLTESQGPPHSGSGSRTSGCRQAVVVQEDSRKDRLPLPLRDTKLLSPLRDTPPPQSLM 762

Query: 154  LSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGR 26
            + + L   S  PQ   PP +GS +R++     PAG     E R
Sbjct: 763  VKITLDLLSRIPQ---PPGKGSRQRKAEDKQPPAGKKHSSEKR 802

>YB95_ARATH (Q8W487) Protein At2g39795, mitochondrial precursor|
          Length = 250

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 251 SSEKNDDDESGGGPPNEDRCPLSIT 177
           S E +DDD+   GP NE   PL +T
Sbjct: 128 SDENDDDDDDDEGPSNESSIPLVVT 152

>NBEA_CHICK (Q9DDD5) Protein neurobeachin (Fragment)|
          Length = 793

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 19/77 (24%), Positives = 31/77 (40%)
 Frame = -3

Query: 247 RRRTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSV 68
           +R T  +    GR  R  +        SP     P  F  +     TP     ++  SS+
Sbjct: 684 QRETARSGSQAGRNIRQEIN-------SPTSTETPAVFPENIKDKETPTPVEDIQLESSI 736

Query: 67  PTSPAGVGEEEEGRFLS 17
           P + +G+GEE+    L+
Sbjct: 737 PHTDSGIGEEQMPNILN 753

>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
 Frame = -3

Query: 241 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSS--- 71
           RT      V R      P QS      W  + P S T  AP  P+P    + ER S+   
Sbjct: 77  RTGPPRATVHRPLAATSPAQSPETTPLWATAGPSSTTFQAPLGPSPTTPPAAERTSTTSQ 136

Query: 70  VPTSPA 53
            PT PA
Sbjct: 137 APTRPA 142

>FUT5_ARATH (Q9SJP4) Probable fucosyltransferase 5 (EC 2.4.1.-) (AtFUT5)|
          Length = 533

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/68 (29%), Positives = 28/68 (41%)
 Frame = -3

Query: 232 TTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSSVPTSPA 53
           T ++    R+  G    SL  L PW+L  P +FT+     P PP   S        T P+
Sbjct: 444 TDNIVTSARSTFGYVSYSLGGLKPWLLYQPTNFTT-----PNPPCVRSKSMEPCYLTPPS 498

Query: 52  GVGEEEEG 29
              E + G
Sbjct: 499 HGCEADWG 506

>FOXK2_HUMAN (Q01167) Forkhead box protein K2 (Interleukin enhancer-binding|
           factor 1) (Cellular transcription factor ILF-1)
          Length = 655

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -3

Query: 241 RTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQL--PTPPIRGSVERRSSV 68
           + T T+L+  +R +       ++ + P +  L ++   +   L  P P   G++   +S 
Sbjct: 146 KITFTALSSEKREKQEASESPVKAVQPHISPLTINIPDTMAHLISPLPSPTGTISAANSC 205

Query: 67  PTSPAGVG 44
           P+SP G G
Sbjct: 206 PSSPRGAG 213

>NBEA_MOUSE (Q9EPN1) Protein neurobeachin (Lysosomal trafficking regulator 2)|
          Length = 2936

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 145  PLSFTSSAPQLPTPPIRGSVERRSSVPTSPAGVGEEEEGRFL 20
            P +F  +  +  TP     ++  SSVP + +G+GEE+    L
Sbjct: 1635 PATFPDTVKEKETPTPGEDIQLESSVPHTDSGMGEEQVASIL 1676

>BNI1_YEAST (P41832) Protein BNI1 (Synthetic lethal 39)|
          Length = 1953

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 3/107 (2%)
 Frame = -3

Query: 367  LLTSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGRRTRTGVP 188
            L  +DG+  +  Q    S   PP  P     PA L+G+ L +   +    V + T    P
Sbjct: 1219 LNNTDGAEDLSTQSSVLSSQPPPPPPPPPPVPAKLFGESLEKEKKSEDDTVKQETTGDSP 1278

Query: 187  CQSLRKLSPWVLSLPLSFTSSAPQLPTPPIRGSVERRSS---VPTSP 56
                    P    + L F     + P PP   SV   S+   +P +P
Sbjct: 1279 APPPPPPPPPPPPMAL-FGKPKGETPPPPPLPSVLSSSTDGVIPPAP 1324

>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase)
          Length = 1327

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 38/145 (26%), Positives = 50/145 (34%)
 Frame = -3

Query: 463 TDAFLAPSPY*REGHLGP*RLGPLFVPDCLQDLLTSDGSSQVEKQKLACSLSDPPLTPIS 284
           T + LAP    R G   P   G    PD  +     DG+S        C+++  P+ P  
Sbjct: 49  TASGLAPFASPRHGLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPVVP-- 106

Query: 283 RTQPASLWGQGLRRRTTTTSLAVGRRTRTGVPCQSLRKLSPWVLSLPLSFTSSAPQLPTP 104
                            +TS A G       P  S    SP   S P S +SS+P  P  
Sbjct: 107 ---------------AVSTSSAAGVAPN---PAGSGSNNSPSSSSSPTSSSSSSPSSPGS 148

Query: 103 PIRGSVERRSSVPTSPAGVGEEEEG 29
            +  S E      T+P G G    G
Sbjct: 149 SLAESPEAAGVSSTAPLGPGAAGPG 173

>CCD95_BOVIN (Q29RS4) Coiled-coil domain-containing protein 95|
          Length = 244

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
 Frame = -3

Query: 370 DLLTSDGSSQVEKQKLACSLSDPPLTPISRTQPASLWGQGLRRRTTTTSLAVGRRTRTGV 191
           D   S  +S+ E       LSD P     R+ P       L    + +SL++     TG 
Sbjct: 71  DATASSDNSETEGTP---KLSDTPAPKRKRSPP-------LGGAPSPSSLSLP--PSTGF 118

Query: 190 PCQSLRKLSPWVLSL------PLSFTSSAPQLPTP-PIRGSVERRSSVP 65
           P Q+ R  SP++ SL      P      A QLP P P+R   E+R  +P
Sbjct: 119 PLQASRAPSPYLSSLASPTYPPFPSDYLALQLPEPSPLRPKREKRPRLP 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,642,739
Number of Sequences: 219361
Number of extensions: 1445412
Number of successful extensions: 4879
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4867
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)