Clone Name | bastl53c09 |
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Clone Library Name | barley_pub |
>URFB1_HUMAN (Q6BDS2) UHRF1-binding protein 1 (Ubiquitin-like containing PHD and| RING finger domains 1-binding protein 1) (ICBP90-binding protein 1) Length = 1440 Score = 38.9 bits (89), Expect = 0.008 Identities = 22/89 (24%), Positives = 40/89 (44%) Frame = +2 Query: 2 YGYADKIADGMTVQVGIVNLLLETHGGTRRQGDATWSPPLAAITFRDLVLYTTNEKWQVV 181 YG+A+K+ +GM + V ++ ++ H W L Y+ N WQ Sbjct: 115 YGFAEKVVEGMFIIVN--SITIKIHSKAFHASFELWQ----------LQGYSVNPNWQQS 162 Query: 182 NLKEARDFSNSTGFIYVFKKLEWQSLSVD 268 +L+ R G + FK++ WQ+L ++ Sbjct: 163 DLRLTRITDPCRGEVLTFKEITWQTLRIE 191
>GLPK_ENTCA (O34153) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol| 3-phosphotransferase) (Glycerokinase) (GK) Length = 505 Score = 32.0 bits (71), Expect = 0.95 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%) Frame = +2 Query: 146 VLYTTNEKWQVVNLKEAR----DFSN-STGFIYVFKKLEWQSLSVDLLPHP-DMFADARF 307 +L+ T + W V L + + D+SN S +Y KLEW +DLL P M + + Sbjct: 160 LLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKS 219 Query: 308 NSSSSQDNKRDDDGAKRMFFGGERFLEGISGEANITL 418 NS + F+G E + G++G+ L Sbjct: 220 NSEVYGHTR------SYHFYGSEVPIAGMAGDQQAAL 250
>TRPE_BUCSC (Q44598) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 530 Score = 32.0 bits (71), Expect = 0.95 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%) Frame = +2 Query: 188 KEARDFSNSTGFIYVFKKLEWQSLSVDL-----LPHPDMFADARFNSSSSQDNKRDDDGA 352 KE R SN F K+++ S+ D+ L +F RF +S ++NK G+ Sbjct: 90 KEVRILSNDN-----FLKIKFPSIVKDIDEDKKLHVLSIFDSIRFLINSVKNNK----GS 140 Query: 353 KRMFFGGERFLEGISGEANITLQRTEQNNP 442 K MFFGG + +S N+ +T Q+ P Sbjct: 141 KSMFFGGLFAYDLVSSFENLPKLKTSQSCP 170
>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)| Length = 730 Score = 31.2 bits (69), Expect = 1.6 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 13/77 (16%) Frame = +2 Query: 248 WQSLSV------DLLPHPDMFADARFNSSSSQDNKR-------DDDGAKRMFFGGERFLE 388 W S+++ D LP P F DA S+ + +R D + MF+GG+ F++ Sbjct: 128 WGSITIHTRSKEDQLP-PLYFHDAESQSTIMEQKRRNKKFETFDSESGSSMFWGGDHFIQ 186 Query: 389 GISGEANITLQRTEQNN 439 +S AN L+R E ++ Sbjct: 187 VLSKYAN--LERAESDH 201
>ZN436_PONPY (Q5R5Y7) Zinc finger protein 436| Length = 470 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Frame = +2 Query: 122 AAITFRDLVLYTTNEKWQVVNLKEA---RDFSNSTGFIYVFKKLEWQSLSVDLLPHPDMF 292 A +TF D+ +Y T E+W+ ++ + RD V E +S + ++ P ++ Sbjct: 12 APVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSEN-EVNPKQEIS 70 Query: 293 ADARFNSSSSQ--DNKRDDDGAKRMFFGGER 379 D +F ++S + +N ++ ++ F G+R Sbjct: 71 EDVQFGTTSERPAENAEENPESEEGFESGDR 101
>ZN436_HUMAN (Q9C0F3) Zinc finger protein 436| Length = 470 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Frame = +2 Query: 122 AAITFRDLVLYTTNEKWQVVNLKEA---RDFSNSTGFIYVFKKLEWQSLSVDLLPHPDMF 292 A +TF D+ +Y T E+W+ ++ + RD V E +S + ++ P ++ Sbjct: 12 APVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSEN-EVNPKQEIS 70 Query: 293 ADARFNSSSSQ--DNKRDDDGAKRMFFGGER 379 D +F ++S + +N ++ ++ F G+R Sbjct: 71 EDVQFGTTSERPAENAEENPESEEGFESGDR 101
>ZNF75_HUMAN (P51815) Zinc finger protein 75| Length = 289 Score = 28.9 bits (63), Expect = 8.1 Identities = 12/37 (32%), Positives = 23/37 (62%) Frame = +2 Query: 119 LAAITFRDLVLYTTNEKWQVVNLKEARDFSNSTGFIY 229 L+ +TF D+ +Y + E+WQ++N E +++ IY Sbjct: 11 LSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIY 47
>SH2P1_XENTR (Q6DEU9) SH2 domain-binding protein 1| Length = 1172 Score = 28.9 bits (63), Expect = 8.1 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +1 Query: 85 SPARRCNMVTSASCYHIS*SRTVHNKRKMAGCKFERSKGLLQQHRI 222 S AR+C+ + S + YH++ +R + K K E+ K +L+Q I Sbjct: 812 SEARQCSDLLSQAQYHVARARKQDEEEKELRAKQEQEKEILRQKLI 857 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,043,536 Number of Sequences: 219361 Number of extensions: 1544567 Number of successful extensions: 4063 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3955 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4059 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)