ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1URFB1_HUMAN (Q6BDS2) UHRF1-binding protein 1 (Ubiquitin-like con... 39 0.008
2GLPK_ENTCA (O34153) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol ... 32 0.95
3TRPE_BUCSC (Q44598) Anthranilate synthase component 1 (EC 4.1.3.... 32 0.95
4GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7) 31 1.6
5ZN436_PONPY (Q5R5Y7) Zinc finger protein 436 30 3.6
6ZN436_HUMAN (Q9C0F3) Zinc finger protein 436 30 3.6
7ZNF75_HUMAN (P51815) Zinc finger protein 75 29 8.1
8SH2P1_XENTR (Q6DEU9) SH2 domain-binding protein 1 29 8.1

>URFB1_HUMAN (Q6BDS2) UHRF1-binding protein 1 (Ubiquitin-like containing PHD and|
           RING finger domains 1-binding protein 1) (ICBP90-binding
           protein 1)
          Length = 1440

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 22/89 (24%), Positives = 40/89 (44%)
 Frame = +2

Query: 2   YGYADKIADGMTVQVGIVNLLLETHGGTRRQGDATWSPPLAAITFRDLVLYTTNEKWQVV 181
           YG+A+K+ +GM + V   ++ ++ H          W           L  Y+ N  WQ  
Sbjct: 115 YGFAEKVVEGMFIIVN--SITIKIHSKAFHASFELWQ----------LQGYSVNPNWQQS 162

Query: 182 NLKEARDFSNSTGFIYVFKKLEWQSLSVD 268
           +L+  R      G +  FK++ WQ+L ++
Sbjct: 163 DLRLTRITDPCRGEVLTFKEITWQTLRIE 191



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>GLPK_ENTCA (O34153) Glycerol kinase (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase) (Glycerokinase) (GK)
          Length = 505

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
 Frame = +2

Query: 146 VLYTTNEKWQVVNLKEAR----DFSN-STGFIYVFKKLEWQSLSVDLLPHP-DMFADARF 307
           +L+ T + W V  L + +    D+SN S   +Y   KLEW    +DLL  P  M  + + 
Sbjct: 160 LLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKS 219

Query: 308 NSSSSQDNKRDDDGAKRMFFGGERFLEGISGEANITL 418
           NS      +         F+G E  + G++G+    L
Sbjct: 220 NSEVYGHTR------SYHFYGSEVPIAGMAGDQQAAL 250



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>TRPE_BUCSC (Q44598) Anthranilate synthase component 1 (EC 4.1.3.27)|
           (Anthranilate synthase component I)
          Length = 530

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = +2

Query: 188 KEARDFSNSTGFIYVFKKLEWQSLSVDL-----LPHPDMFADARFNSSSSQDNKRDDDGA 352
           KE R  SN       F K+++ S+  D+     L    +F   RF  +S ++NK    G+
Sbjct: 90  KEVRILSNDN-----FLKIKFPSIVKDIDEDKKLHVLSIFDSIRFLINSVKNNK----GS 140

Query: 353 KRMFFGGERFLEGISGEANITLQRTEQNNP 442
           K MFFGG    + +S   N+   +T Q+ P
Sbjct: 141 KSMFFGGLFAYDLVSSFENLPKLKTSQSCP 170



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>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)|
          Length = 730

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
 Frame = +2

Query: 248 WQSLSV------DLLPHPDMFADARFNSSSSQDNKR-------DDDGAKRMFFGGERFLE 388
           W S+++      D LP P  F DA   S+  +  +R       D +    MF+GG+ F++
Sbjct: 128 WGSITIHTRSKEDQLP-PLYFHDAESQSTIMEQKRRNKKFETFDSESGSSMFWGGDHFIQ 186

Query: 389 GISGEANITLQRTEQNN 439
            +S  AN  L+R E ++
Sbjct: 187 VLSKYAN--LERAESDH 201



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>ZN436_PONPY (Q5R5Y7) Zinc finger protein 436|
          Length = 470

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
 Frame = +2

Query: 122 AAITFRDLVLYTTNEKWQVVNLKEA---RDFSNSTGFIYVFKKLEWQSLSVDLLPHPDMF 292
           A +TF D+ +Y T E+W+ ++  +    RD         V    E +S + ++ P  ++ 
Sbjct: 12  APVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSEN-EVNPKQEIS 70

Query: 293 ADARFNSSSSQ--DNKRDDDGAKRMFFGGER 379
            D +F ++S +  +N  ++  ++  F  G+R
Sbjct: 71  EDVQFGTTSERPAENAEENPESEEGFESGDR 101



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>ZN436_HUMAN (Q9C0F3) Zinc finger protein 436|
          Length = 470

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
 Frame = +2

Query: 122 AAITFRDLVLYTTNEKWQVVNLKEA---RDFSNSTGFIYVFKKLEWQSLSVDLLPHPDMF 292
           A +TF D+ +Y T E+W+ ++  +    RD         V    E +S + ++ P  ++ 
Sbjct: 12  APVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIRSEN-EVNPKQEIS 70

Query: 293 ADARFNSSSSQ--DNKRDDDGAKRMFFGGER 379
            D +F ++S +  +N  ++  ++  F  G+R
Sbjct: 71  EDVQFGTTSERPAENAEENPESEEGFESGDR 101



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>ZNF75_HUMAN (P51815) Zinc finger protein 75|
          Length = 289

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +2

Query: 119 LAAITFRDLVLYTTNEKWQVVNLKEARDFSNSTGFIY 229
           L+ +TF D+ +Y + E+WQ++N  E   +++    IY
Sbjct: 11  LSLLTFEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIY 47



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>SH2P1_XENTR (Q6DEU9) SH2 domain-binding protein 1|
          Length = 1172

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = +1

Query: 85  SPARRCNMVTSASCYHIS*SRTVHNKRKMAGCKFERSKGLLQQHRI 222
           S AR+C+ + S + YH++ +R    + K    K E+ K +L+Q  I
Sbjct: 812 SEARQCSDLLSQAQYHVARARKQDEEEKELRAKQEQEKEILRQKLI 857


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,043,536
Number of Sequences: 219361
Number of extensions: 1544567
Number of successful extensions: 4063
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4059
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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