ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl53c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA, complete cds Length = 2887 Score = 434 bits (219), Expect = e-118 Identities = 258/271 (95%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 150 cgcctcttcgcccccgccttcgcggtcgccgcctccggctccggcgacttcctccgcccg 209 Query: 279 cacggcggcggcgcctccggcgtctccaggattggtgacttgcattttgagacacgtgag 338 |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 210 cacggcggcggcgcctccggcgtctccaggattggtgacttgcattctgagtcacgtgag 269 Query: 339 cgtattcgttattcaagagatcaacttcttgacctgcgaaagattaccgatatatccgag 398 ||| |||||||||||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct: 270 cgtgttcgttattcaagagatcaacttcttgacctgcgcaagattactgatgtaaccgag 329 Query: 399 caaatcttgaggcttcagcaggaaattgaagcagagcttcatggtgacgatcagagctgg 458 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 330 caaatcttgaggcttcagcaagaaattgaagcagagcttaatggtgacgatcagagctgg 389 Query: 459 gttcgcaacgattcgaatgtgcagttgcaga 489 |||||||||||||| |||||||| ||||||| Sbjct: 390 gttcgcaacgattcaaatgtgcaattgcaga 420 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Plus Query: 73 ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 132 |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1 ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60 Query: 133 ggccgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 190 || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 118
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA sequence Length = 2863 Score = 359 bits (181), Expect = 6e-96 Identities = 253/272 (93%), Gaps = 5/272 (1%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 150 cgcctcttcgcccccgccttcgcggtcgccgcctccggctccggcgacttcctccgcccg 209 Query: 279 cacggcggcggcgcct-ccggcgtctccaggattggtgacttgcattttgagacacgtga 337 |||||||||||||||| |||| ||||||||||||||| ||||||| | ||| |||| | Sbjct: 210 cacggcggcggcgccttccgggctctccaggattggtg-cttgcatct-gagtcacg--a 265 Query: 338 gcgtattcgttattcaagagatcaacttcttgacctgcgaaagattaccgatatatccga 397 |||| |||||||||||||||||||||||||||||||||| |||||||| ||| | |||| Sbjct: 266 gcgtgttcgttattcaagagatcaacttcttgacctgcgcaagattactgatgtgaccga 325 Query: 398 gcaaatcttgaggcttcagcaggaaattgaagcagagcttcatggtgacgatcagagctg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 gcaaatcttgaggcttcagcaggaaattgaagcagagcttcatggtgacgatcagagctg 385 Query: 458 ggttcgcaacgattcgaatgtgcagttgcaga 489 ||||||||||||||| |||||||| ||||||| Sbjct: 386 ggttcgcaacgattcaaatgtgcaattgcaga 417 Score = 178 bits (90), Expect = 1e-41 Identities = 111/118 (94%) Strand = Plus / Plus Query: 73 ccgcgatttcctccccggcgccccgccgattccctgtcgatcgagctgccgcggtgcctt 132 |||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1 ccgcgatttcctcctcggccgcccgccgattccctgtcgatcgagctgtcgcggtgcctt 60 Query: 133 ggccgggttcgggaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 190 || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggtcggattcggcaccctcagccatgacgacagaccagccagtgatcagcctgcgccc 118
>ref|XM_473052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2382 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 70 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 129 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 130 cacgtcggcggcgc 143 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 178 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 218
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 47821 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 47762 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 47761 cacgtcggcggcgc 47748 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 47039 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 46999
>gb|AY224450.1| Oryza sativa (japonica cultivar-group) isolate 23225 eukaryotic initiation factor-like protein mRNA, complete cds Length = 2379 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 70 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 129 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 130 cacgtcggcggcgc 143 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 178 gagcgtgttcgctatacaagagatcaacttctcgagctgcg 218
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 24927236 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 24927177 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 24927176 cacgtcggcggcgc 24927163 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 24926454 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 24926414
>emb|AM156961.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Tog5672 Length = 2558 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 183 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 242 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 243 cacgtcggcggcgc 256 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 291 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 331
>emb|AM156960.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Tog5673 Length = 2533 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 183 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 242 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 243 cacgtcggcggcgc 256 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 291 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 331
>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Tog5681 Length = 2699 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 183 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 242 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 243 cacgtcggcggcgc 256 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 291 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 331
>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar Gigante Length = 2599 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 80 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 139 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 140 cacgtcggcggcgc 153 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 188 gagcgtgttcgctatacaagagatcaacttctcgagctgcg 228
>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic translation initiation factor 4 gamma (eif(iso)4g gene), cultivar IR64 Length = 2599 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 219 cgcctctttgcccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccg 278 |||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct: 73 cgcctcttctcccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcc 132 Query: 279 cacggcggcggcgc 292 |||| ||||||||| Sbjct: 133 cacgtcggcggcgc 146 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 181 gagcgtgttcgctatacaagagatcaacttctcgagctgcg 221
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 87.7 bits (44), Expect = 3e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 229 cccccgccttcgccgtcgccgcctccggctccggcgacttcctccgcccgcacggcggcg 288 ||||||||||||||| |||||||||||||||||||||||| |||||| | |||| ||||| Sbjct: 55312 cccccgccttcgccgccgccgcctccggctccggcgacttgctccgctcccacgtcggcg 55253 Query: 289 gcgc 292 |||| Sbjct: 55252 gcgc 55249 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 54548 gagcgtgttcgctatacaagagatcaacttctcgagctgcg 54508
>gb|AY109824.1| Zea mays CL533_1 mRNA sequence Length = 2894 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 321 cattttgagacacgtgagcgtattcgttattcaagagatcaacttcttgacctgcgaaag 380 ||||||||| ||||||||||| |||| || |||||||||||||||| || ||||| || Sbjct: 323 cattttgagccacgtgagcgtgttcgatacacaagagatcaacttctcgagctgcgtgag 382 Query: 381 attaccgatatatccgagcaaatcttgaggcttcagcaggaaattgaagcagagcttcat 440 ||| ||| | || ||| |||| || || | |||| || ||||| | |||||||||| Sbjct: 383 attgttgatgtgtctgaggaaattttaagaatcaagcaagagattgatgtagagcttcat 442 Query: 441 ggtgacgatcagagctgggttcgcaacgattc 472 ||||| || ||||||||||||||||| ||||| Sbjct: 443 ggtgaagaccagagctgggttcgcaatgattc 474
>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full insert sequence Length = 2907 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 247 ccgcctccggctccggcgacttcctccgcccgcacggcggcggcgc 292 |||||||||||||||||||||| |||||| | |||| ||||||||| Sbjct: 139 ccgcctccggctccggcgacttgctccgctcccacgtcggcggcgc 184 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 gagcgtattcgttattcaagagatcaacttcttgacctgcg 376 |||||| |||| ||| |||||||||||||||| || ||||| Sbjct: 219 gagcgtgttcgctatacaagagatcaacttctcgaactgcg 259
>ref|XM_483376.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 237 ttcgccgtcgccgcctccggctccggcg 264 |||||||||||||||||||||| ||||| Sbjct: 1859 ttcgccgtcgccgcctccggctgcggcg 1832
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 237 ttcgccgtcgccgcctccggctccggcg 264 |||||||||||||||||||||| ||||| Sbjct: 25924211 ttcgccgtcgccgcctccggctgcggcg 25924238 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 cggcggcggcgcctccggcgt 301 ||||||||||||||||||||| Sbjct: 26154769 cggcggcggcgcctccggcgt 26154789
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 228 gcccccgccttcgccgtcgccgcctccg 255 |||| ||||||||||||||||||||||| Sbjct: 7733336 gccctcgccttcgccgtcgccgcctccg 7733363 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 1981064 ccgccttcgccgtcgccgcc 1981045
>dbj|AP005509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1003_A09 Length = 150755 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 237 ttcgccgtcgccgcctccggctccggcg 264 |||||||||||||||||||||| ||||| Sbjct: 109998 ttcgccgtcgccgcctccggctgcggcg 110025
>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1081_B12 Length = 124741 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 237 ttcgccgtcgccgcctccggctccggcg 264 |||||||||||||||||||||| ||||| Sbjct: 9088 ttcgccgtcgccgcctccggctgcggcg 9115
>dbj|AK121158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079L12, full insert sequence Length = 2595 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 237 ttcgccgtcgccgcctccggctccggcg 264 |||||||||||||||||||||| ||||| Sbjct: 2020 ttcgccgtcgccgcctccggctgcggcg 1993
>gb|AF345522.1| TT virus isolate TCHN-E Orf2 and Orf1 genes, complete cds Length = 3288 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 cggcggcgcctccggcgtctcca 306 ||||||||||||||||||||||| Sbjct: 547 cggcggcgcctccggcgtctcca 525
>gb|AF315076.1|AF315076 TTV-like virus DXL1 unknown genes Length = 3285 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 284 cggcggcgcctccggcgtctcca 306 ||||||||||||||||||||||| Sbjct: 541 cggcggcgcctccggcgtctcca 519
>dbj|AB158460.1| Streptomyces halstedii hlsA, hlsB, hlsC genes for type I polyketide synthase, type I polyketide synthase, type I polyketide synthase, complete and partial cds Length = 45102 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 275 cccgcacggcggcggcgcctccggcgt 301 |||||| |||||||||||||||||||| Sbjct: 43234 cccgcagggcggcggcgcctccggcgt 43208
>ref|XM_466679.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2486 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 cgacttcctccgcccgcacggcggcg 288 ||||||||||||||||| |||||||| Sbjct: 169 cgacttcctccgcccgcgcggcggcg 194
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 263 cgacttcctccgcccgcacggcggcg 288 ||||||||||||||||| |||||||| Sbjct: 24093957 cgacttcctccgcccgcgcggcggcg 24093932 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccggc 263 ||||| ||||||||||||||||||| Sbjct: 4208607 cgccgccgccgcctccggctccggc 4208583 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gccgtcgccgcctccggctccggc 263 |||| ||||||||||||||||||| Sbjct: 33493867 gccgccgccgcctccggctccggc 33493890 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 cgccttcgccgtcgccgcctccggctcc 260 |||||||||||||||| ||||| ||||| Sbjct: 21970598 cgccttcgccgtcgccacctcccgctcc 21970625
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 263 cgacttcctccgcccgcacggcggcg 288 ||||||||||||||||| |||||||| Sbjct: 52698 cgacttcctccgcccgcgcggcggcg 52673
>dbj|AK072083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118N03, full insert sequence Length = 3014 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 263 cgacttcctccgcccgcacggcggcg 288 ||||||||||||||||| |||||||| Sbjct: 169 cgacttcctccgcccgcgcggcggcg 194
>ref|XM_483426.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 cggcggcggcgcctccggcgt 301 ||||||||||||||||||||| Sbjct: 683 cggcggcggcgcctccggcgt 703
>ref|NM_183759.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1644 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 gcccgcacggcggcggcgcctccggcgtc 302 |||||||||||| ||||||| |||||||| Sbjct: 794 gcccgcacggcgccggcgccgccggcgtc 822
>gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete sequence Length = 103190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ctccgcccgcacggcggcggc 290 ||||||||||||||||||||| Sbjct: 101622 ctccgcccgcacggcggcggc 101602
>gb|AY022671.1| Oryza sativa microsatellite MRG4996 containing (CCG)X8, closest to marker C421, genomic sequence Length = 224 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 cgccgtcgccgcctccggctccggc 263 ||||| ||||||||||||||||||| Sbjct: 114 cgccgccgccgcctccggctccggc 138
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 acggcggcggcgcctccggcg 300 ||||||||||||||||||||| Sbjct: 41219 acggcggcggcgcctccggcg 41239
>tpg|BK000941.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M333, complete sequence Length = 14620 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 gcccgcacggcggcggcgcctccggcgtc 302 |||||||||||| ||||||| |||||||| Sbjct: 10383 gcccgcacggcgccggcgccgccggcgtc 10411
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccttcgccgtcgccgcctccg 255 ||||||||||||||||||||| Sbjct: 6218024 ccttcgccgtcgccgcctccg 6218004 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggctccg 261 |||||||||||||||||| ||||| Sbjct: 3869098 tcgccgtcgccgcctccgcctccg 3869121 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggctccg 261 |||||||||||||||||| ||||| Sbjct: 3831042 tcgccgtcgccgcctccgcctccg 3831065
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 gcccgcacggcggcggcgcctccggcgtc 302 |||||||||||| ||||||| |||||||| Sbjct: 12075305 gcccgcacggcgccggcgccgccggcgtc 12075333 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 29716165 ccgcacggtggcggcgcctccggc 29716142
>gb|AC172304.2| Gallus gallus BAC clone CH261-75C12 from chromosome ul, complete sequence Length = 227366 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ctccgcccgcacggcggcggc 290 ||||||||||||||||||||| Sbjct: 38521 ctccgcccgcacggcggcggc 38541
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccggc 263 ||||| ||||||||||||||||||| Sbjct: 25421 cgccgccgccgcctccggctccggc 25397
>dbj|AP003414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1153F04 Length = 158174 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 gcccgcacggcggcggcgcctccggcgtc 302 |||||||||||| ||||||| |||||||| Sbjct: 42245 gcccgcacggcgccggcgccgccggcgtc 42273
>dbj|AP003921.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028G04 Length = 159761 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 gcccgcacggcggcggcgcctccggcgtc 302 |||||||||||| ||||||| |||||||| Sbjct: 120969 gcccgcacggcgccggcgccgccggcgtc 120997
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccttcgccgtcgccgcctccg 255 ||||||||||||||||||||| Sbjct: 131843 ccttcgccgtcgccgcctccg 131823
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccttcgccgtcgccgcctccg 255 ||||||||||||||||||||| Sbjct: 12100 ccttcgccgtcgccgcctccg 12080
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 cggcggcggcgcctccggcgt 301 ||||||||||||||||||||| Sbjct: 98700 cggcggcggcgcctccggcgt 98720
>dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-H05, full insert sequence Length = 1808 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccttcgccgtcgccgcctccg 255 ||||||||||||||||||||| Sbjct: 1458 ccttcgccgtcgccgcctccg 1438
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 tccgcccgcacggcggcggcgcctc 295 ||||||||||||||| ||||||||| Sbjct: 3929248 tccgcccgcacggcgccggcgcctc 3929272
>gb|DQ176871.1| Streptomyces aureofaciens strain Tu117 lipomycin biosynthesis gene cluster, complete sequence Length = 66871 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gcccgcacggcggcggcgcc 293 |||||||||||||||||||| Sbjct: 17207 gcccgcacggcggcggcgcc 17188
>ref|XM_468176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3248 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gccgtcgccgcctccggctccggc 263 |||| ||||||||||||||||||| Sbjct: 2628 gccgccgccgcctccggctccggc 2651
>ref|XM_466368.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1679 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 cgccttcgccgtcgccgcctccggctcc 260 |||||||||||||||| ||||| ||||| Sbjct: 378 cgccttcgccgtcgccacctcccgctcc 351
>ref|NM_197184.1| Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.12), mRNA Length = 957 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 243 cgccgcctccggctccggcg 224
>ref|NM_197186.1| Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.2), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 258 cgccgcctccggctccggcg 239
>ref|NM_197185.1| Oryza sativa (japonica cultivar-group) putative epoxide hydrolase (OSJNBa0017E08.11), mRNA Length = 864 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 245 cgccgcctccggctccggcg 226
>ref|NM_196634.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0019M20.6), mRNA Length = 996 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 cgccgtcgccgcctccggctccggcgac 266 ||||||||||||||||| | |||||||| Sbjct: 129 cgccgtcgccgcctccgccgccggcgac 156
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 cgcccgcacggcggcggcgc 292 |||||||||||||||||||| Sbjct: 2776750 cgcccgcacggcggcggcgc 2776731
>ref|NM_191743.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 948 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 334 ccgcacggtggcggcgcctccggc 357
>gb|AY023280.1| Oryza sativa microsatellite MRG5605 containing (GGC)X8, closest to marker C185, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 177 ccgccttcgccgtcgccgcc 158 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 153 ccgccttcgccgtcgccgcc 134
>gb|AY390355.1| Triticum aestivum ammonium transporter (AMT1) mRNA, complete cds Length = 1852 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 gccttcgccgtcgccgcctccggc 257 |||||||||||||||||| ||||| Sbjct: 423 gccttcgccgtcgccgccgccggc 446
>ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA Length = 2437 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 699 cgccgcctccggctccggcg 680
>gb|BC021786.1| Mus musculus integral membrane protein 2B, mRNA (cDNA clone MGC:27534 IMAGE:4458918), complete cds Length = 1132 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 111 ccccagccttcgccgtcgccgcct 134
>gb|BC004731.1| Mus musculus integral membrane protein 2B, mRNA (cDNA clone MGC:6390 IMAGE:3583154), complete cds Length = 1577 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 73 ccccagccttcgccgtcgccgcct 96
>ref|NM_008410.1| Mus musculus integral membrane protein 2B (Itm2b), mRNA Length = 1790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 102 ccccagccttcgccgtcgccgcct 125
>gb|AY100692.1| Oryza sativa (japonica cultivar-group) alpha expansin 26 (EXPA26) mRNA, complete cds Length = 1011 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 180 ccgccttcgccgtcgccgcc 161 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 156 ccgccttcgccgtcgccgcc 137
>gb|AF394561.1| Oryza sativa alpha-expansin OsEXPA26 (EXPA26) gene, complete cds Length = 6312 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 4101 ccgccttcgccgtcgccgcc 4082 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 4077 ccgccttcgccgtcgccgcc 4058
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cttcctccgcccgcacggcg 285 |||||||||||||||||||| Sbjct: 31753705 cttcctccgcccgcacggcg 31753686 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccgg 262 ||||||||||||||||||| |||| Sbjct: 7140053 cgccgtcgccgcctccggcgccgg 7140030 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cttcgccgtcgccgcctccg 255 |||||||||||||||||||| Sbjct: 5675760 cttcgccgtcgccgcctccg 5675779
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence Length = 236220 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 186930 ccccagccttcgccgtcgccgcct 186953
>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence Length = 192668 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 tattcaagagatcaacttcttgac 371 |||||||||| ||||||||||||| Sbjct: 169402 tattcaagagctcaacttcttgac 169379
>gb|AC004912.2| Homo sapiens PAC clone RP5-871B15 from 7, complete sequence Length = 157321 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccgg 262 ||||| |||||||||||||||||| Sbjct: 2098 cgccgccgccgcctccggctccgg 2075
>gb|BC064434.1| Mus musculus cDNA clone IMAGE:5031911, **** WARNING: chimeric clone **** Length = 2235 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 580 ccccagccttcgccgtcgccgcct 603
>gb|AC103849.3| Homo sapiens chromosome 8, clone RP11-75H14, complete sequence Length = 147107 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gacagaccagccagtgatca 180 |||||||||||||||||||| Sbjct: 15395 gacagaccagccagtgatca 15376
>gb|AC108850.3| Mus musculus chromosome 1, clone RP24-85N11, complete sequence Length = 194889 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 tgaagcagagcttcatggtg 444 |||||||||||||||||||| Sbjct: 70005 tgaagcagagcttcatggtg 70024
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cttcctccgcccgcacggcg 285 |||||||||||||||||||| Sbjct: 78931 cttcctccgcccgcacggcg 78912
>ref|XM_965221.1| PREDICTED: Tribolium castaneum similar to Guanine nucleotide-releasing protein (GNRP) (Ras-specific nucleotide exchange factor CDC25) (CDC25Mm) (LOC658869), mRNA Length = 4197 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 232 ccgccttcgccgtcgccgcctccggctc 259 ||||||||||| ||||| |||||||||| Sbjct: 3041 ccgccttcgccatcgccacctccggctc 3068
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggc 257 |||||||||||||||||||| Sbjct: 287728 tcgccgtcgccgcctccggc 287747
>emb|AJ518946.2|SSP518946 Sinorhizobium sp. BR816 nodulation gene cluster nodD1, nodE, nodF, nodA, nodB, nodC, nodS, nodU, nodI, nodJ, orf350, nodH, nodP2, nodQ2 genes and orf116, orf113 and orf352, strain BR816 Length = 18521 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 cgcctccggcgtctccaggattgg 313 ||||||| |||||||||||||||| Sbjct: 11586 cgcctccagcgtctccaggattgg 11563
>gb|BC010320.1| Mus musculus integral membrane protein 2B, mRNA (cDNA clone MGC:11918 IMAGE:3599190), complete cds Length = 1125 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 105 ccccagccttcgccgtcgccgcct 128
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 23462 cgccgcctccggctccggcg 23481 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 20041 cgccgcctccggctccggcg 20060 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 16339 cgccgcctccggctccggcg 16358
>gb|AC109442.3| Homo sapiens chromosome 5 clone CTC-345B2, complete sequence Length = 71075 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 aaatcttgaggcttcagcag 419 |||||||||||||||||||| Sbjct: 43235 aaatcttgaggcttcagcag 43216
>gb|AC107952.5| Homo sapiens chromosome 8, clone RP11-140I16, complete sequence Length = 142102 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gacagaccagccagtgatca 180 |||||||||||||||||||| Sbjct: 106152 gacagaccagccagtgatca 106133
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cggcggcggcgcctccggcg 300 |||||||||||||||||||| Sbjct: 2486153 cggcggcggcgcctccggcg 2486134
>gb|AE005679.1| Caulobacter crescentus CB15 section 5 of 359 of the complete genome Length = 12370 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cccgcacggcggcggcgcct 294 |||||||||||||||||||| Sbjct: 5532 cccgcacggcggcggcgcct 5513
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ggcggcggcgcctccggcgt 301 |||||||||||||||||||| Sbjct: 87682 ggcggcggcgcctccggcgt 87701
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccggcgac 266 ||||||||||||||||| | |||||||| Sbjct: 70430 cgccgtcgccgcctccgccgccggcgac 70403
>tpg|BK005062.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 59 (WRKY59) gene, complete cds Length = 1422 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 127 ccgcacggtggcggcgcctccggc 150
>tpg|BK005029.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 26 (WRKY26) gene, complete cds Length = 1682 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 118 ccgcacggtggcggcgcctccggc 141
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 cccgcacggcggcggcgcctccggcgtc 302 ||||||||||||||||| | |||||||| Sbjct: 3333763 cccgcacggcggcggcggccccggcgtc 3333790
>gb|AC106752.3| Homo sapiens chromosome 5 clone RP11-166J22, complete sequence Length = 95926 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 aaatcttgaggcttcagcag 419 |||||||||||||||||||| Sbjct: 164 aaatcttgaggcttcagcag 145
>dbj|AK152983.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830097L09 product:integral membrane protein 2B, full insert sequence Length = 1782 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 114 ccccagccttcgccgtcgccgcct 137
>dbj|AK152068.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830047A14 product:integral membrane protein 2B, full insert sequence Length = 1778 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 110 ccccagccttcgccgtcgccgcct 133
>dbj|AK151889.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830041O04 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK151714.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830034P08 product:integral membrane protein 2B, full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK159426.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019N09 product:integral membrane protein 2B, full insert sequence Length = 1758 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159378.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019A05 product:integral membrane protein 2B, full insert sequence Length = 1611 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK159340.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420016M09 product:integral membrane protein 2B, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159307.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015F05 product:integral membrane protein 2B, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 65 ccccagccttcgccgtcgccgcct 88
>dbj|AK152731.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083F02 product:integral membrane protein 2B, full insert sequence Length = 1588 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 93 ccccagccttcgccgtcgccgcct 116
>dbj|AK152650.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081M10 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK152516.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830077N12 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK150396.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006K20 product:integral membrane protein 2B, full insert sequence Length = 1611 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK150378.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830006A16 product:integral membrane protein 2B, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AK160101.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420048O12 product:integral membrane protein 2B, full insert sequence Length = 1758 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>gb|AC104179.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0021B21, from chromosome 3, complete sequence Length = 166777 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cttcgccgtcgccgcctccg 255 |||||||||||||||||||| Sbjct: 155411 cttcgccgtcgccgcctccg 155392
>dbj|AK159962.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041C04 product:integral membrane protein 2B, full insert sequence Length = 1761 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 93 ccccagccttcgccgtcgccgcct 116
>dbj|AK160725.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010095A11 product:integral membrane protein 2B, full insert sequence Length = 1786 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 121 ccccagccttcgccgtcgccgcct 144
>dbj|AK159792.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420031F04 product:integral membrane protein 2B, full insert sequence Length = 1580 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159628.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026C05 product:integral membrane protein 2B, full insert sequence Length = 1095 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK159619.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420025M06 product:integral membrane protein 2B, full insert sequence Length = 1604 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 114 ccccagccttcgccgtcgccgcct 137
>dbj|AK003587.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110008K10 product:integral membrane protein 2B, full insert sequence Length = 1096 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 91 ccccagccttcgccgtcgccgcct 114
>dbj|AK003224.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110001H20 product:integral membrane protein 2B, full insert sequence Length = 1074 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 69 ccccagccttcgccgtcgccgcct 92
>gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome 1, complete sequence Length = 223534 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagcagagcttcatggtg 444 |||||||||||||||||||| Sbjct: 65721 tgaagcagagcttcatggtg 65702
>dbj|AK077482.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730420C10 product:integral membrane protein 2B, full insert sequence Length = 1109 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 104 ccccagccttcgccgtcgccgcct 127
>dbj|AK088270.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430009G24 product:integral membrane protein 2B, full insert sequence Length = 1583 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AK002599.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610012F24 product:integral membrane protein 2B, full insert sequence Length = 1070 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 65 ccccagccttcgccgtcgccgcct 88
>dbj|AK005125.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500002O14 product:integral membrane protein 2B, full insert sequence Length = 1583 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 93 ccccagccttcgccgtcgccgcct 116
>dbj|AK076139.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900026F24 product:integral membrane protein 2B, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 111 ccccagccttcgccgtcgccgcct 134
>dbj|AK003928.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110025O13 product:integral membrane protein 2B, full insert sequence Length = 1095 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 90 ccccagccttcgccgtcgccgcct 113
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 22123379 ccgccttcgccgtcgccgcc 22123360 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 22123355 ccgccttcgccgtcgccgcc 22123336
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 18490354 cgccgcctccggctccggcg 18490335 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 18486652 cgccgcctccggctccggcg 18486633 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 18483231 cgccgcctccggctccggcg 18483212 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccggcgac 266 ||||||||||||||||| | |||||||| Sbjct: 14890652 cgccgtcgccgcctccgccgccggcgac 14890625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cttcctccgcccgcacggcg 285 |||||||||||||||||||| Sbjct: 31844221 cttcctccgcccgcacggcg 31844202 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccgg 262 ||||||||||||||||||| |||| Sbjct: 7137948 cgccgtcgccgcctccggcgccgg 7137925 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cttcgccgtcgccgcctccg 255 |||||||||||||||||||| Sbjct: 5674973 cttcgccgtcgccgcctccg 5674992
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 45896 ccgcacggtggcggcgcctccggc 45873
>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence Length = 149172 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 aaatcttgaggcttcagcag 419 |||||||||||||||||||| Sbjct: 102586 aaatcttgaggcttcagcag 102567
>gb|AE004625.1| Pseudomonas aeruginosa PAO1, section 186 of 529 of the complete genome Length = 11871 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tcgccgcctccggctccggc 263 |||||||||||||||||||| Sbjct: 6407 tcgccgcctccggctccggc 6388
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 cgccgtcgccgcctccggctccgg 262 ||||||||||||||||||| |||| Sbjct: 54285 cgccgtcgccgcctccggcgccgg 54308
>gb|AC105928.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0014O06, complete sequence Length = 168031 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cttcgccgtcgccgcctccg 255 |||||||||||||||||||| Sbjct: 139459 cttcgccgtcgccgcctccg 139478
>dbj|AP005699.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046L23 Length = 100041 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 cgccttcgccgtcgccgcctccggctcc 260 |||||||||||||||| ||||| ||||| Sbjct: 19220 cgccttcgccgtcgccacctcccgctcc 19247
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ccgcccgcacggcggcggcg 291 |||||||||||||||||||| Sbjct: 6121974 ccgcccgcacggcggcggcg 6121955
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggctccg 261 |||||||||||||||||| ||||| Sbjct: 127052 tcgccgtcgccgcctccgcctccg 127075 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggctccg 261 |||||||||||||||||| ||||| Sbjct: 88996 tcgccgtcgccgcctccgcctccg 89019
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gccgtcgccgcctccggctccggc 263 |||| ||||||||||||||||||| Sbjct: 68742 gccgccgccgcctccggctccggc 68765
>dbj|AK120570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134D09, full insert sequence Length = 1353 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 293 cgccgcctccggctccggcg 274
>dbj|AK108555.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-E10, full insert sequence Length = 1193 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 158 ccgcacggtggcggcgcctccggc 181
>dbj|AK106265.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F12, full insert sequence Length = 1573 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 cgccgtcgccgcctccggctccggcgac 266 ||||||||||||||||| | |||||||| Sbjct: 515 cgccgtcgccgcctccgccgccggcgac 542
>dbj|AK102182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086M11, full insert sequence Length = 1678 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 233 cgccttcgccgtcgccgcctccggctcc 260 |||||||||||||||| ||||| ||||| Sbjct: 378 cgccttcgccgtcgccacctcccgctcc 351
>emb|AJ329702.1|HSA329702 Homo sapiens genomic sequence surrounding NotI site, clone NL1-UC14C Length = 572 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tcagagctgggttcgcaacg 468 |||||||||||||||||||| Sbjct: 378 tcagagctgggttcgcaacg 359
>gb|AC154718.2| Mus musculus BAC clone RP24-370G12 from 14, complete sequence Length = 182043 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 171384 ccccagccttcgccgtcgccgcct 171361
>emb|AJ330169.1|HSA330169 Homo sapiens genomic sequence surrounding NotI site, clone HSJ6-AH12RS Length = 694 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 46 ccgccttcgccgtcgccgcc 27
>dbj|AK072337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H01, full insert sequence Length = 3406 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gccgtcgccgcctccggctccggc 263 |||| ||||||||||||||||||| Sbjct: 2786 gccgccgccgcctccggctccggc 2809
>dbj|AK072305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A13, full insert sequence Length = 1527 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 239 cgccgtcgccgcctccggctccggcgac 266 ||||||||||||||||| | |||||||| Sbjct: 478 cgccgtcgccgcctccgccgccggcgac 505
>dbj|AK071978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I16, full insert sequence Length = 3248 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 gccgtcgccgcctccggctccggc 263 |||| ||||||||||||||||||| Sbjct: 2627 gccgccgccgcctccggctccggc 2650
>dbj|AK071328.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087C24, full insert sequence Length = 1175 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 199 ccgccttcgccgtcgccgcc 180 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 175 ccgccttcgccgtcgccgcc 156
>dbj|AK060338.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C11, full insert sequence Length = 1182 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 327 cgccgcctccggctccggcg 308
>dbj|AK059984.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G05, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggctccg 261 |||||||||||||||||| ||||| Sbjct: 33 tcgccgtcgccgcctccgcctccg 56
>dbj|AK059829.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H12, full insert sequence Length = 1092 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 cttcgccgtcgccgcctccg 255 |||||||||||||||||||| Sbjct: 76 cttcgccgtcgccgcctccg 95
>dbj|AK059733.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H06, full insert sequence Length = 1250 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 308 cgccgcctccggctccggcg 289
>dbj|AK059099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C08, full insert sequence Length = 1256 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 327 cgccgcctccggctccggcg 308
>dbj|AB059642.1| Perilla frutescens mRNA for putative regulatory protein in anthocyanin biosynthesis, complete cds Length = 1410 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ctccggcgacttcctccgcc 276 |||||||||||||||||||| Sbjct: 317 ctccggcgacttcctccgcc 336
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 ttgcccccgccttcgccgtcgccg 249 |||||| ||||||||||||||||| Sbjct: 1991866 ttgccctcgccttcgccgtcgccg 1991889
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 cgcacggcggcggcgcctccggcg 300 |||||||||||||||| ||||||| Sbjct: 2746561 cgcacggcggcggcgcgtccggcg 2746584
>gb|U76253.1|MMU76253 Mus musculus E25B protein mRNA, complete cds Length = 1790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 102 ccccagccttcgccgtcgccgcct 125
>gb|L38607.1|MUSBF2TF Mus musculus (clones 1 and 5) transcription factor (BF-2) mRNA, complete cds Length = 2437 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 699 cgccgcctccggctccggcg 680
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 18500407 cgccgcctccggctccggcg 18500388 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 18496705 cgccgcctccggctccggcg 18496686 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 cgccgcctccggctccggcg 264 |||||||||||||||||||| Sbjct: 18493284 cgccgcctccggctccggcg 18493265 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 cgccgtcgccgcctccggctccggcgac 266 ||||||||||||||||| | |||||||| Sbjct: 14898893 cgccgtcgccgcctccgccgccggcgac 14898866
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 22051724 ccgccttcgccgtcgccgcc 22051705 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 22051700 ccgccttcgccgtcgccgcc 22051681
>emb|AL731742.3|CNS08C7R Oryza sativa chromosome 12, . BAC OJ1123_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155585 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 129655 ccgccttcgccgtcgccgcc 129674 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ccgccttcgccgtcgccgcc 251 |||||||||||||||||||| Sbjct: 129631 ccgccttcgccgtcgccgcc 129650
>gb|AY870609.1| Oryza sativa (japonica cultivar-group) WRKY26 mRNA, complete cds Length = 931 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 ccgcacggcggcggcgcctccggc 299 |||||||| ||||||||||||||| Sbjct: 134 ccgcacggtggcggcgcctccggc 157
>gb|AC138328.3| Mus musculus BAC clone RP23-378F20 from 1, complete sequence Length = 153109 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagcagagcttcatggtg 444 |||||||||||||||||||| Sbjct: 146645 tgaagcagagcttcatggtg 146626
>emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chromosome 13, complete sequence Length = 195169 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 aaattgaagcagagcttcat 440 |||||||||||||||||||| Sbjct: 152872 aaattgaagcagagcttcat 152853
>gb|AC100561.13| Mus musculus chromosome 1, clone RP23-154C4, complete sequence Length = 207939 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 tgaagcagagcttcatggtg 444 |||||||||||||||||||| Sbjct: 29914 tgaagcagagcttcatggtg 29895
>dbj|AB030203.1| Mus musculus mRNA for E25B protein, complete cds, clone:2-76 Length = 1622 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 cccccgccttcgccgtcgccgcct 252 |||| ||||||||||||||||||| Sbjct: 122 ccccagccttcgccgtcgccgcct 145
>dbj|AB026560.1| Oryza sativa (japonica cultivar-group) OsPAC1 mRNA for alpha 3 subunit of 20S proteasome, complete cds Length = 999 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 tcgccgtcgccgcctccggctccg 261 |||||||||||||||||| ||||| Sbjct: 36 tcgccgtcgccgcctccgcctccg 59 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,436,808 Number of Sequences: 3902068 Number of extensions: 3436808 Number of successful extensions: 75398 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72580 Number of HSP's gapped (non-prelim): 2816 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
