ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NOP14_HUMAN (P78316) Probable nucleolar complex protein 14 50 2e-06
2NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14 49 6e-06
3NOP14_SCHPO (O43051) Probable nucleolar complex protein 14 34 0.21

>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14|
          Length = 857

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 24/58 (41%), Positives = 39/58 (67%)
 Frame = +3

Query: 291 SNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHERENTLLKEFEQSAQSSVFHDR 464
           SNPFE   +R+KF +LG+K + +      SR+ A+ +R  TLLKE+++  +S+VF D+
Sbjct: 29  SNPFEVKVNRQKFQILGRKTRHDVGLPGVSRARALRKRTQTLLKEYKERDKSNVFRDK 86



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>NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14|
          Length = 860

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = +3

Query: 294 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHERENTLLKEFEQSAQSSVFHDR 464
           NPFE   +R+KF +LG+K + +      SR+ A+ +R  TLLKE+++  +S+VF D+
Sbjct: 30  NPFEVKVNRQKFQILGRKTRHDVGLPGVSRARAIRKRTQTLLKEYKERNKSNVFADK 86



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>NOP14_SCHPO (O43051) Probable nucleolar complex protein 14|
          Length = 827

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 294 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHERENTLLKEFEQSAQSSVFHDR 464
           N F+  +++RKFDV G++ KG E +   SR      R  T+  E ++  +S    DR
Sbjct: 52  NLFDRQFTKRKFDVGGRRVKGTEGKPGVSRGVGEELRRRTIGAELKKRNRSGAIIDR 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.121    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,412,544
Number of Sequences: 219361
Number of extensions: 405555
Number of successful extensions: 1323
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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