ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl53b12 |
|---|---|
| Clone Library Name | barley_pub |
>AAC2_DICDI (P14196) AAC-rich mRNA clone AAC11 protein (Fragment)| Length = 448 Score = 33.9 bits (76), Expect = 0.10 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 3/93 (3%) Frame = +3 Query: 6 SNGDIELGSHGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDS---KQFKGRPVSSQRAVL 176 +N + LG + + +A +D + PR+ P +P D+ K+ +GRP Sbjct: 139 NNNNSNLGINSSPTQSSANS--ADKRSRGRPRKNPPSEPKDTSGPKRKRGRPPKMDEEGN 196 Query: 177 TGQNTADQKPINKRSLVPKKQASVNNTQYNDTS 275 Q NK+ PKK N + YN+TS Sbjct: 197 PQPKPVPQPGSNKKRGRPKKPKDENESDYNNTS 229
>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 33.9 bits (76), Expect = 0.10 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +3 Query: 27 GSHGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQN 188 GS GR + +A S N++ PRQP P Q +DS+ G V +QR + N Sbjct: 243 GSGGRGQSPDASGRSS--NRRDRPRQPSPSQSSDSQVHSGVQVEAQRGQSSSAN 294
>SIGL5_HUMAN (O15389) Sialic acid-binding Ig-like lectin 5 precursor (Siglec-5)| (Obesity-binding protein 2) (OB-binding protein 2) (OB-BP2) (CD33 antigen-like 2) (CD170 antigen) Length = 551 Score = 30.0 bits (66), Expect = 1.5 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%) Frame = +3 Query: 36 GRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKG--RPVSSQRAVLTGQNTADQKPI 209 GR +KM+ EDP ++P+P P D G P+ Q+ + + A Sbjct: 471 GRPEKMDDEDPIMGTITSGSRKKPWPDSPGDQASPPGDAPPLEEQKEL----HYASLSFS 526 Query: 210 NKRSLVPKKQASVNNTQYNDTSVER 284 +S PK Q + + T+Y++ + Sbjct: 527 EMKSREPKDQEAPSTTEYSEIKTSK 551
>MUCDL_RAT (Q9JIK1) Mucin and cadherin-like protein precursor| (Mu-protocadherin) (GP100) Length = 862 Score = 30.0 bits (66), Expect = 1.5 Identities = 22/73 (30%), Positives = 28/73 (38%) Frame = +3 Query: 36 GRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINK 215 G S P D Q P P PT G SSQ A +G +T KP Sbjct: 530 GISTSPQTATPGGDATQTPKPGTSQPMVPTP-----GASTSSQPATPSGSSTQTPKPGTS 584 Query: 216 RSLVPKKQASVNN 254 + +VP AS ++ Sbjct: 585 QPMVPTPGASTSS 597 Score = 27.3 bits (59), Expect = 9.8 Identities = 20/73 (27%), Positives = 27/73 (36%) Frame = +3 Query: 36 GRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINK 215 G S P Q P P PT G SSQ A +G +T +P Sbjct: 561 GASTSSQPATPSGSSTQTPKPGTSQPMVPTP-----GASTSSQPATPSGSSTQTPRPGTS 615 Query: 216 RSLVPKKQASVNN 254 + +VP AS ++ Sbjct: 616 QPMVPTPGASTSS 628
>TAT_HV1JR (P20879) TAT protein (Transactivating regulatory protein)| Length = 101 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = +3 Query: 30 SHGRSKKMNAEDPPSD--CNQQSVPRQPFPKQ---PTDSKQFK 143 S+GR K+ PP D +Q S+P+QP +Q PT K+ K Sbjct: 46 SYGRKKRRQRRRPPQDSQTHQVSLPKQPSSQQRGDPTGPKESK 88
>TOM1_NEUCR (Q9P4Z1) E3 ubiquitin protein ligase TOM1-like protein (EC 6.3.2.-)| Length = 4065 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/76 (25%), Positives = 34/76 (44%) Frame = +3 Query: 60 EDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQ 239 E+ S +Q+ +Q +QP++S A +GQ A Q NK PK++ Sbjct: 3366 EEQASTSTEQTPAQQEATQQPSESTP----------AAASGQQPAQQDQENKELEAPKEK 3415 Query: 240 ASVNNTQYNDTSVERL 287 A + Q ++ + +L Sbjct: 3416 ADEKDVQSDEKKIRQL 3431
>RL3_MYCGA (O52332) 50S ribosomal protein L3| Length = 236 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/61 (29%), Positives = 27/61 (44%) Frame = +3 Query: 81 NQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQASVNNTQ 260 N + +P +P K + AV G N D+K +NK L K+A+ NN + Sbjct: 18 NGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNLNKPQLGHFKKANTNNYK 77 Query: 261 Y 263 Y Sbjct: 78 Y 78
>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)| Length = 2414 Score = 29.3 bits (64), Expect = 2.6 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 9/83 (10%) Frame = +3 Query: 24 LGSHGRSKKMNAEDPP--------SDCNQ-QSVPRQPFPKQPTDSKQFKGRPVSSQRAVL 176 L HG+ + A +PP NQ Q +P+ FP Q + P S Q V Sbjct: 733 LQHHGQLAQPGALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQAPVS 792 Query: 177 TGQNTADQKPINKRSLVPKKQAS 245 Q ++ P+N + P Q S Sbjct: 793 QAQMSSSSCPVNSPIMPPGSQGS 815
>THIG_ODOSI (P49570) Thiazole biosynthesis protein thiG| Length = 261 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -2 Query: 246 LKLAFLEQETFC*LASDLQYFVLLELLSEKRLVCP*TAWNLWAA 115 +++AFL E C L + +FV LE++S+ + + P L AA Sbjct: 87 IRMAFLGHELACQLGQEDNFFVKLEVISDPKYLLPDPIGTLKAA 130
>SYT_METMP (Q6M057) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 622 Score = 29.3 bits (64), Expect = 2.6 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 5/94 (5%) Frame = +3 Query: 21 ELGSHGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQ 200 +LGS +K++ AE N V R PF + KG P+S L+ + T D+ Sbjct: 84 DLGSPATAKEILAEIESELSNNYEVLRAPFGWYKSFKISCKGHPLSE----LSRKITTDR 139 Query: 201 KPINKRSLVPKK-----QASVNNTQYNDTSVERL 287 K K+ V K S N T+ ND + ++ Sbjct: 140 KEEVKKEKVVSKFYIIDGESQNLTEVNDEIIAKM 173
>ASF2_YEAST (P32448) Anti-silencing protein 2| Length = 525 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/56 (26%), Positives = 25/56 (44%) Frame = +3 Query: 3 ESNGDIELGSHGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRA 170 E + + L R ++ PP N +S+ + P+ PTDS Q + S + A Sbjct: 432 EKSTTLNLDYSSRKSYLSRLQPPHIANLKSLTLKTLPRVPTDSPQLPSKDKSQETA 487
>DAB_DROME (P98081) Protein disabled| Length = 2224 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Frame = +3 Query: 12 GDIELGSHG----RSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLT 179 GD+ L S+ + + ++ P D + ++P Q K+P + + + R S+RAV Sbjct: 1793 GDVVLPSNAVVGPQRLRKSSGSSPWDGEEPALPGQKSWKRPASAAETERRLAESRRAVAL 1852 Query: 180 GQNTAD 197 GQ +D Sbjct: 1853 GQTPSD 1858
>YM41_YEAST (Q03213) Hypothetical 79.4 kDa protein in ALD2-DDR48 intergenic| region Length = 719 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/68 (23%), Positives = 29/68 (42%) Frame = +3 Query: 102 QPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQASVNNTQYNDTSVE 281 +PF P K+ + S+ A +A QKPI+ S + S + Y ++S+ Sbjct: 371 KPFKLNPNGIKRRRRNTQSNNNASTNDHASAAQKPISALSPLTNSHNSTTSMNYTNSSIH 430 Query: 282 RLIREVTN 305 + +N Sbjct: 431 SGVTSASN 438
>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 992 Score = 28.5 bits (62), Expect = 4.4 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Frame = +3 Query: 33 HGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPIN 212 H ++ + P ++ P P PK+P SK VS +A G ++ Sbjct: 904 HLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSK----AAVSRDKASDAGDK--QRQEAR 957 Query: 213 KRSLVPKKQASV--NNTQYNDTSVERLIRE 296 KR L K+ ASV N+ + S+E + E Sbjct: 958 KRLLAAKRAASVRQNSATESADSIEIYVPE 987
>HCN1_RAT (Q9JKB0) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 1 Length = 910 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +3 Query: 84 QQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQASVNNTQY 263 QQ QP P+QP +Q + + Q Q Q+P S PK + + Sbjct: 742 QQQQQPQPQPQQPQQQQQQQQQQQQQQ------QQQQQQQPQTPGSSTPKNEVHKSTQAL 795 Query: 264 NDTSVERLIREVTNGQ 311 ++T + R +R ++ Q Sbjct: 796 HNTHLTREVRPLSASQ 811
>MYLK2_HUMAN (Q9H1R3) Myosin light chain kinase 2, skeletal/cardiac muscle (EC| 2.7.11.18) (MLCK2) Length = 595 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = +3 Query: 42 SKKMNAEDPPSDCNQ---QSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQ 200 S+K+ A+ PPS+ ++ + VP P P +K +G+ + ++ G+ T Q Sbjct: 158 SEKLLAKKPPSEASELTFEGVPMTHSPTDPRPAKAEEGKNILAESQKEVGEKTPGQ 213
>DLGP4_HUMAN (Q9Y2H0) Disks large-associated protein 4 (DAP-4)| (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4) Length = 989 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = +3 Query: 33 HGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPIN 212 H ++ + P ++ P P PK+P SK R +S + ++ Sbjct: 901 HLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD------ASDKQRQEAR 954 Query: 213 KRSLVPKKQASV--NNTQYNDTSVERLIRE 296 KR L K+ ASV N+ + S+E + E Sbjct: 955 KRLLAAKRAASVRQNSATESADSIEIYVPE 984
>TFR1_HUMAN (P02786) Transferrin receptor protein 1 (TfR1) (TR) (TfR) (Trfr)| (CD71 antigen) (T9) (p90) Length = 760 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +3 Query: 129 SKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQASVNNTQYNDTSVERLIREVTNG 308 S F G P+S R L Q D + + V +++ + NNT+ N T +R + G Sbjct: 10 SNLFGGEPLSYTRFSLARQVDGDNSHVEMKLAVDEEENADNNTKANVTKPKRCSGSICYG 69
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC| 2.7.11.1) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230) (TAFII250) (TBP-associated factor 230 kDa) (p230) Length = 2129 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/87 (24%), Positives = 37/87 (42%) Frame = +3 Query: 3 ESNGDIELGSHGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTG 182 E +G S+ + M AE S + R+P P P + K+ +GRP + V Sbjct: 1749 EGHGGHASSSNSIHRSMGAEAGSS--HTAPAVRKPAPPGPGEVKRGRGRPRKQRDPV--- 1803 Query: 183 QNTADQKPINKRSLVPKKQASVNNTQY 263 + Q P+ + P+K + +N + Sbjct: 1804 EEVKSQNPVKRGRGRPRKDSLASNMSH 1830
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 28.1 bits (61), Expect = 5.7 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Frame = +3 Query: 42 SKKMNAEDPPSDCNQQSVPRQPFPKQP----TDSKQFK-GRPVSSQRAVLTGQNTADQKP 206 SKK ++ D +P P P QP D + K G V S R+ L+GQ++ + Sbjct: 466 SKKYSSSVSEQDSGLDGMPGSPPPSQPDPEHLDKPKLKAGGSVESLRSSLSGQSSMSGQT 525 Query: 207 INKRSLVPKKQASVNNTQYND 269 ++ + SV + +D Sbjct: 526 VSTTDSSTSNRESVKSEDGDD 546
>NBN_CHICK (Q9DE07) Nibrin (Nijmegen breakage syndrome protein 1 homolog)| Length = 753 Score = 27.7 bits (60), Expect = 7.5 Identities = 23/68 (33%), Positives = 30/68 (44%) Frame = +3 Query: 78 CNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQASVNNT 257 CN Q RQP K T S K RPVSSQ +T D+ +++P A + Sbjct: 319 CNPQ---RQPDNKAVTASTASKVRPVSSQ------SSTVDE------TIMPTAAADYSTL 363 Query: 258 QYNDTSVE 281 DT +E Sbjct: 364 NVADTEIE 371
>HOR3_HORVU (P06471) B3-hordein (Fragment)| Length = 264 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 87 QSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQN--TADQKPI 209 QS P+QPFP Q +Q P Q+ VL+ Q T DQ P+ Sbjct: 47 QSFPQQPFPSQQPFPQQ---PPFWQQQPVLSQQQPCTQDQTPL 86 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = +3 Query: 60 EDPPSDCNQQSVPRQP---FPKQPTDSKQFKGRPVSSQ 164 + P S QQ +P+QP FP QP + F +P+ Q Sbjct: 1 QQPVSRQPQQIIPQQPQQPFPLQPQQPQPFPQQPIPQQ 38
>GDO_TRIMO (P02865) Omega-gliadin (Fragment)| Length = 28 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 Query: 42 SKKMNAEDPPSDCNQQSVPRQPFPKQP 122 ++++N D QQ P+QP+P+QP Sbjct: 1 ARQLNPSDQELQSPQQLYPQQPYPQQP 27
>TAT_HV1EL (P04611) TAT protein (Transactivating regulatory protein)| Length = 99 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/59 (30%), Positives = 25/59 (42%) Frame = +3 Query: 30 SHGRSKKMNAEDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKP 206 S+GR K+ PP V P PKQP S Q +G P + ++ A+ P Sbjct: 46 SYGRKKRRQRRGPPQGGQAHQV---PIPKQP--SSQPRGDPTGPKEQKKKVESEAETDP 99
>STK6_RAT (P59241) Serine/threonine-protein kinase 6 (EC 2.7.11.1) (Aurora-A)| (ratAurA) Length = 397 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/68 (27%), Positives = 33/68 (48%) Frame = +3 Query: 81 NQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLVPKKQASVNNTQ 260 N Q VP P ++P + +PV Q +G A + ++S P+ AS NN++ Sbjct: 51 NSQRVP--PQAQKPVAGQ----KPVLKQLPAASGPRPASRLSNPQKSEQPQPAASGNNSE 104 Query: 261 YNDTSVER 284 TS+++ Sbjct: 105 KEQTSIQK 112
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 3 ESNGDIELGSHGRSKKMNAEDPPSDCNQQS-VPRQPFPKQPTDSKQFKGRPVSSQRAVLT 179 E++ DIE+ + + + D S N + PRQ DS+ + RP R Sbjct: 220 ETDSDIEVDPNNLTDPEDTSDETSTDNSSAQAPRQE------DSRPARARPGPPTRGRRR 273 Query: 180 GQNTADQKPINKRSLVPKKQASVNNTQYN 266 G+ A P ++RS +++ N++ N Sbjct: 274 GRRPAAPGPASRRSARLRRRQPRTNSRTN 302
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 3 ESNGDIELGSHGRSKKMNAEDPPSDCNQQS-VPRQPFPKQPTDSKQFKGRPVSSQRAVLT 179 E++ DIE+ + + + D S N + PRQ DS+ + RP R Sbjct: 220 ETDSDIEVDPNNLTDPEDTSDETSTDNSSAQAPRQE------DSRPARARPGPPTRGRRR 273 Query: 180 GQNTADQKPINKRSLVPKKQASVNNTQYN 266 G+ A P ++RS +++ N++ N Sbjct: 274 GRRPAAPGPASRRSARLRRRQPRTNSRTN 302
>YB35_SCHPO (O14340) Oxysterol-binding protein homolog C2F12.05c| Length = 1310 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 2/101 (1%) Frame = +3 Query: 27 GSHGRSKKMNAEDPPSD--CNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQ 200 G H R + + ++ ++S+P KQP+ +Q + + SQ++ + Q+T Q Sbjct: 752 GQHARQESLPSQQTTETKHLRKESIPS----KQPSGGQQLRQESLPSQQSSESKQSTQHQ 807 Query: 201 KPINKRSLVPKKQASVNNTQYNDTSVERLIREVTNGQFWHN 323 +P+ + + ++ + ++ V + Q N Sbjct: 808 QPVEVQKSIQSDVSAPKAKEVSEKPVSHQAKPSNASQLSRN 848
>SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/SNF complex| component SNF5) (Transcription factor TYE4) Length = 905 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Frame = +1 Query: 73 QIVINNLSQGSLFQSSPQIPSSSRADQSLLREQF*QDK---ILQIRSQSTKGLLFQKSKL 243 Q V+N L Q ++ +++PQ+ ++ Q ++ Q Q K Q + + + LL Q+ + Sbjct: 137 QQVLNKLRQQAIAKNNPQVVNAITVAQQQVQRQIEQQKGQQTAQTQLEQQRQLLVQQQQQ 196 Query: 244 QLITHSI 264 Q + + I Sbjct: 197 QQLRNQI 203
>NFAC1_MOUSE (O88942) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 717 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +3 Query: 33 HGRSKKMNAEDPPSDCNQQSVPRQPF-PKQPTDSKQFKGRPVSSQRAVLTGQN 188 +GR+ + P +C+Q+S P KQ TDS + ++ VL+G N Sbjct: 573 NGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSYPV----IGGKKMVLSGHN 621
>CHD4_HUMAN (Q14839) Chromodomain helicase-DNA-binding protein 4 (EC 3.6.1.-)| (ATP-dependent helicase CHD4) (CHD-4) (Mi-2 autoantigen 218 kDa protein) (Mi2-beta) Length = 1912 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +3 Query: 54 NAEDPPSDCNQQSVP---RQPFPKQPTDSKQFKGRPVSSQRAVLTGQ 185 N EDP D ++ P ++ PK+P D K K + +R +L Q Sbjct: 35 NEEDPEEDLSETETPKLKKKKKPKKPRDPKIPKSKRQKKERMLLCRQ 81
>FA61B_XENTR (Q566L7) Protein FAM61B homolog| Length = 382 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/53 (33%), Positives = 22/53 (41%) Frame = +3 Query: 69 PSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKRSLV 227 PS Q SVP PF PT S+ +S Q A G P+ K +V Sbjct: 102 PSASYQSSVPYSPFRGMPTYSQLAASSLLSQQYAASLGLAGFPSIPLRKSPMV 154
>ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 protein) (Nesprin| homolog) Length = 8545 Score = 27.3 bits (59), Expect = 9.8 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Frame = +3 Query: 60 EDPPSDCNQQSVPRQPFPKQPTDSKQFKGRPVSSQRAVLTGQNTADQKPINKR---SLVP 230 E+P S + V P P + K +S + L A P+ +R L P Sbjct: 149 EEPTSSAQPEVVVTAPSPTPSSKKSHSKVSSLSGSKTSLASGEKAPSSPLRQRIASFLTP 208 Query: 231 KKQASVNNTQYNDTSVERLIREVTNGQ 311 K+A Q SVE++ N + Sbjct: 209 TKKAPKLTAQPVKQSVEQVFLRWINAE 235
>LPAT5_ARATH (Q9LHN4) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5| (EC 2.3.1.51) (Lysophosphatidyl acyltransferase 5) Length = 375 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 Query: 322 LCQNCPFVTSRISRSTDVSLYCVLLTEACFFGTRDLLLI 206 +C + F +S I VSL CV LT A F R + L+ Sbjct: 325 ICTHLTFFSSMIWFRIYVSLACVYLTSATHFNLRSVPLV 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,500,673 Number of Sequences: 219361 Number of extensions: 902485 Number of successful extensions: 2825 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 2708 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2820 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
