ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl53b10 |
|---|---|
| Clone Library Name | barley_pub |
>APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipophorin-2| (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] Length = 3305 Score = 33.1 bits (74), Expect = 0.16 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +3 Query: 276 SGPYNPEVLTTHKRQWSRFQQKSLGNRCIKEPSHLFESIV 395 + PY +V + +W+RF Q+ ++ KE SH+F IV Sbjct: 2415 AAPYFKKVEDNFRAEWNRFYQEIADDKVFKEISHVFNEIV 2454
>EDNRB_RABIT (Q9N0W7) Endothelin B receptor precursor (ET-B) (Endothelin| receptor Non-selective type) Length = 441 Score = 31.2 bits (69), Expect = 0.61 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +2 Query: 188 VWGREWQ-PNAEAAAAILEDHERVFKSTRSVWTIQSRGSHDTQAAVVEVPAE 340 VWG E + P+A A +L E + ST++ W S S +A E+P E Sbjct: 24 VWGEEREMPSAPATPPLLGASEILTPSTKTSWPRDSNASLPRSSAPAEIPKE 75
>RS16_BIFLO (Q8G7G1) 30S ribosomal protein S16| Length = 153 Score = 30.8 bits (68), Expect = 0.80 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 209 PNAEAAAAILEDHERVFKSTRSVWTIQSRGSHDTQAAVVEVPAE 340 P+AEA A +ED + K+ +S +++ + AA E PAE Sbjct: 100 PDAEARIAAVEDQAQKLKAAKSEAAAKAKAEAEAAAAAEEAPAE 143
>FBN2_MOUSE (Q61555) Fibrillin-2 precursor| Length = 2907 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -1 Query: 400 TITMLSKRCDGSLMHLLPNDFCWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFM 245 TI RC+ + C ++D CR LC V T G + + G+E+ FM Sbjct: 1085 TIGSFKCRCNNGFALDMEERNCTDIDECRISPDLCGSGICVNTPGSFECECFEGYESGFM 1144 Query: 244 IFENC 230 + +NC Sbjct: 1145 MMKNC 1149
>FBN2_HUMAN (P35556) Fibrillin-2 precursor| Length = 2911 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 8/65 (12%) Frame = -1 Query: 400 TITMLSKRCDGSLMHLLPNDFCWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFM 245 TI RC+ + C ++D CR LC V T G + + G+E+ FM Sbjct: 1091 TIGSFKCRCNSGFALDMEERNCTDIDECRISPDLCGSGICVNTPGSFECECFEGYESGFM 1150 Query: 244 IFENC 230 + +NC Sbjct: 1151 MMKNC 1155
>FBN1_MOUSE (Q61554) Fibrillin-1 precursor| Length = 2871 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Frame = -1 Query: 400 TITMLSKRCDGSLMHLLPNDFCWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFM 245 TI RCD C ++D CR LC V T G + G+E+ FM Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFM 1106 Query: 244 IFENC 230 + +NC Sbjct: 1107 MMKNC 1111
>FBN1_HUMAN (P35555) Fibrillin-1 precursor| Length = 2871 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Frame = -1 Query: 400 TITMLSKRCDGSLMHLLPNDFCWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFM 245 TI RCD C ++D CR LC V T G + G+E+ FM Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFM 1106 Query: 244 IFENC 230 + +NC Sbjct: 1107 MMKNC 1111
>FBN1_BOVIN (P98133) Fibrillin-1 precursor (MP340)| Length = 2871 Score = 29.3 bits (64), Expect = 2.3 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Frame = -1 Query: 400 TITMLSKRCDGSLMHLLPNDFCWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFM 245 TI RCD C ++D CR LC V T G + G+E+ FM Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFM 1106 Query: 244 IFENC 230 + +NC Sbjct: 1107 MMKNC 1111
>FBN1_PIG (Q9TV36) Fibrillin-1 precursor| Length = 2871 Score = 28.9 bits (63), Expect = 3.0 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%) Frame = -1 Query: 400 TITMLSKRCDGSLMHLLPNDFCWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFM 245 TI RCD C ++D CR LC V T G + G+E+ FM Sbjct: 1047 TIGSFKCRCDSGFALDSEERNCIDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFM 1106 Query: 244 IFENC 230 + +NC Sbjct: 1107 MMKNC 1111
>ID3_RAT (P41138) DNA-binding protein inhibitor ID-3 (Inhibitor of DNA| binding 3) Length = 119 Score = 28.5 bits (62), Expect = 4.0 Identities = 24/78 (30%), Positives = 33/78 (42%) Frame = +2 Query: 113 RGCKSIYCCYFSCHCATNTAICRLFVWGREWQPNAEAAAAILEDHERVFKSTRSVWTIQS 292 RGC CC + AI R GR P+AE ++L+D + R + Sbjct: 8 RGCYEAVCCLSE----RSLAIAR----GRGKSPSAEEPLSLLDDMNHCYSRLRELVPGVP 59 Query: 293 RGSHDTQAAVVEVPAEVI 346 RG TQ + VE+ VI Sbjct: 60 RG---TQLSQVEILQRVI 74
>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor| Length = 2809 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 8/44 (18%) Frame = -1 Query: 337 CWNLDHCR----LC----VVRTSGLYGPDTSGGFENPFMIFENC 230 C ++D CR LC V T G + + G+E+ FM+ +NC Sbjct: 1026 CTDIDECRISPDLCGQGTCVNTPGSFECECFPGYESGFMLMKNC 1069
>ID3_BOVIN (Q5E981) DNA-binding protein inhibitor ID-3 (Inhibitor of DNA| binding 3) Length = 119 Score = 27.3 bits (59), Expect = 8.9 Identities = 24/78 (30%), Positives = 32/78 (41%) Frame = +2 Query: 113 RGCKSIYCCYFSCHCATNTAICRLFVWGREWQPNAEAAAAILEDHERVFKSTRSVWTIQS 292 RGC CC + AI R GR P AE ++L+D + R + Sbjct: 8 RGCYEAVCCLSE----RSLAIAR----GRGKSPAAEEPLSLLDDMNHCYSRLRELVPGVP 59 Query: 293 RGSHDTQAAVVEVPAEVI 346 RG TQ + VE+ VI Sbjct: 60 RG---TQLSQVEILQRVI 74
>Y109_MYCBO (P64692) Hypothetical protein Mb0109| Length = 398 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 355 LLPNDFCWNLDHCRLCV 305 L P CW +DH R+CV Sbjct: 97 LEPQPICWAIDHVRVCV 113
>Y106_MYCTU (P64691) Hypothetical protein Rv0106/MT0115| Length = 398 Score = 27.3 bits (59), Expect = 8.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 355 LLPNDFCWNLDHCRLCV 305 L P CW +DH R+CV Sbjct: 97 LEPQPICWAIDHVRVCV 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,542,602 Number of Sequences: 219361 Number of extensions: 1028377 Number of successful extensions: 2595 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2555 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2595 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
