No.
Definition
Score (bits)
E Value
1 gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome...
62
1e-06
2 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
62
1e-06
3 dbj|AK120605.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-06
4 dbj|AK102711.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-06
5 dbj|AK066026.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
1e-06
6 dbj|D14577.1|MZEGS1B Zea mays mRNA for glutamine synthetase, com...
46
0.074
7 emb|AL023893.1|DMC132E8 Drosophila melanogaster cosmid clone 132E8
44
0.29
8 gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell ...
44
0.29
9 ref|NM_166885.1| Drosophila melanogaster CG32813-RD, transcript ...
44
0.29
10 gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell...
44
0.29
11 gb|AY109349.1| Zea mays CL1911_3 mRNA sequence
44
0.29
12 gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 o...
44
0.29
13 emb|AL845257.2| Mouse DNA sequence from clone RP23-280K4 on chro...
44
0.29
14 ref|XM_464004.1| Oryza sativa (japonica cultivar-group), mRNA
42
1.2
15 ref|NM_026899.1| Mus musculus Ssu72 RNA polymerase II CTD phosph...
42
1.2
16 dbj|AK148131.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-len...
42
1.2
17 dbj|AK164070.1| Mus musculus 7 days embryo whole body cDNA, RIKE...
42
1.2
18 dbj|AK049554.1| Mus musculus 7 days embryo whole body cDNA, RIKE...
42
1.2
19 dbj|AK005220.1| Mus musculus adult male cerebellum cDNA, RIKEN f...
42
1.2
20 gb|BC016544.1| Mus musculus Ssu72 RNA polymerase II CTD phosphat...
42
1.2
21 dbj|AK004446.1| Mus musculus 18-day embryo whole body cDNA, RIKE...
42
1.2
22 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
42
1.2
23 dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D...
42
1.2
24 dbj|AK120231.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
1.2
25 dbj|AK110285.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
1.2
26 dbj|AK102856.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
1.2
27 gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
42
1.2
28 emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chr...
42
1.2
29 gb|AC160966.2| Mus musculus BAC clone RP24-362F17 from chromosom...
40
4.6
30 gb|AY965843.1| Rhynchosporium secalis microsatellite Rhyncho_9 s...
40
4.6
31 gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome...
40
4.6
32 ref|XM_418829.1| PREDICTED: Gallus gallus similar to MLN64 N-ter...
40
4.6
33 gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome...
40
4.6
34 gb|AC093365.10| Mus musculus chromosome 3, clone RP23-60O16, com...
40
4.6
35 ref|NM_033113.1| Homo sapiens zinc finger protein 628 (ZNF628), ...
40
4.6
36 gb|DQ160222.1|DQ160222S1 Zea mays pericarp color 1 gene, pericar...
40
4.6
37 gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet...
40
4.6
38 ref|XM_757495.1| Ustilago maydis 521 hypothetical protein (UM064...
40
4.6
39 gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome...
40
4.6
40 gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome...
40
4.6
41 emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos...
40
4.6
42 gb|AC008735.9| Homo sapiens chromosome 19 clone CTD-2537I9, comp...
40
4.6
43 dbj|AB169977.1| Moraxella bovis plasmid pMBO-2 DNA, complete seq...
40
4.6
44 gb|AC123912.1| Homo sapiens chromosome 19 clone RP11-678G14, com...
40
4.6
45 gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete...
40
4.6
46 gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, comple...
40
4.6
47 gb|AC008089.3|AC008089 Drosophila melanogaster, chromosome 3R, r...
40
4.6
48 gb|AC007822.4|AC007822 Drosophila melanogaster, chromosome 3R, r...
40
4.6
49 gb|BC089449.1| Homo sapiens zinc finger protein 628, mRNA (cDNA ...
40
4.6
50 dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN...
40
4.6
51 emb|BX935588.1| Gallus gallus finished cDNA, clone ChEST84d7
40
4.6
52 dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic D...
40
4.6
53 dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D...
40
4.6
54 emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in ...
40
4.6
55 dbj|AK102861.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
4.6
56 gb|AE003687.3| Drosophila melanogaster chromosome 3R, section 25...
40
4.6
57 emb|CT571257.6| Mouse DNA sequence from clone RP24-168J13 on chr...
40
4.6
58 emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb...
40
4.6
59 emb|AL671899.11| Mouse DNA sequence from clone RP23-27B23 on chr...
40
4.6
>gb|AE004969.1 | Neisseria gonorrhoeae FA 1090, complete genome
Length = 2153922
Score = 42.1 bits (21), Expect = 1.2
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgttc 49
|||||||| ||||||||||||||||
Sbjct: 358536 cgttgcgttgcgttgcgttgcgttc 358512
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358616 cgttgcgttgcgttgcgttgcgtt 358593
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358611 cgttgcgttgcgttgcgttgcgtt 358588
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358606 cgttgcgttgcgttgcgttgcgtt 358583
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358601 cgttgcgttgcgttgcgttgcgtt 358578
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358596 cgttgcgttgcgttgcgttgcgtt 358573
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358591 cgttgcgttgcgttgcgttgcgtt 358568
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358586 cgttgcgttgcgttgcgttgcgtt 358563
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358581 cgttgcgttgcgttgcgttgcgtt 358558
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358576 cgttgcgttgcgttgcgttgcgtt 358553
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358571 cgttgcgttgcgttgcgttgcgtt 358548
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358566 cgttgcgttgcgttgcgttgcgtt 358543
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358561 cgttgcgttgcgttgcgttgcgtt 358538
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358556 cgttgcgttgcgttgcgttgcgtt 358533
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358551 cgttgcgttgcgttgcgttgcgtt 358528
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358546 cgttgcgttgcgttgcgttgcgtt 358523
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 358541 cgttgcgttgcgttgcgttgcgtt 358518
>gb|AY965843.1 | Rhynchosporium secalis microsatellite Rhyncho_9 sequence
Length = 174
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 101 cgttgcgttgcgttgcgttgcgtt 78
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 96 cgttgcgttgcgttgcgttgcgtt 73
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 91 cgttgcgttgcgttgcgttgcgtt 68
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 86 cgttgcgttgcgttgcgttgcgtt 63
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 81 cgttgcgttgcgttgcgttgcgtt 58
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 76 cgttgcgttgcgttgcgttgcgtt 53
>gb|AC124584.5 | Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence
Length = 193083
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188610 cgttgcgttgcgttgcgttgcgtt 188587
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188605 cgttgcgttgcgttgcgttgcgtt 188582
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188600 cgttgcgttgcgttgcgttgcgtt 188577
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188595 cgttgcgttgcgttgcgttgcgtt 188572
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188590 cgttgcgttgcgttgcgttgcgtt 188567
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188585 cgttgcgttgcgttgcgttgcgtt 188562
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188580 cgttgcgttgcgttgcgttgcgtt 188557
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188575 cgttgcgttgcgttgcgttgcgtt 188552
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188570 cgttgcgttgcgttgcgttgcgtt 188547
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188565 cgttgcgttgcgttgcgttgcgtt 188542
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188560 cgttgcgttgcgttgcgttgcgtt 188537
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 188555 cgttgcgttgcgttgcgttgcgtt 188532
>gb|AC124713.5 | Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence
Length = 184855
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 131024 cgttgcgttgcgttgcgttgcgtt 131047
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 131019 cgttgcgttgcgttgcgttgcgtt 131042
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 131014 cgttgcgttgcgttgcgttgcgtt 131037
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 131009 cgttgcgttgcgttgcgttgcgtt 131032
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 131004 cgttgcgttgcgttgcgttgcgtt 131027
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130999 cgttgcgttgcgttgcgttgcgtt 131022
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130994 cgttgcgttgcgttgcgttgcgtt 131017
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130989 cgttgcgttgcgttgcgttgcgtt 131012
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130984 cgttgcgttgcgttgcgttgcgtt 131007
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130979 cgttgcgttgcgttgcgttgcgtt 131002
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130974 cgttgcgttgcgttgcgttgcgtt 130997
Score = 40.1 bits (20), Expect = 4.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 cgttgcgtcgcgttgcgttgcgtt 48
|||||||| |||||||||||||||
Sbjct: 130969 cgttgcgttgcgttgcgttgcgtt 130992
>emb|AL671899.11 | Mouse DNA sequence from clone RP23-27B23 on chromosome 3, complete
sequence
Length = 132775
Score = 40.1 bits (20), Expect = 4.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 137 ccgccgcccccgcgcctcgc 156
||||||||||||||||||||
Sbjct: 22696 ccgccgcccccgcgcctcgc 22677
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,431,393
Number of Sequences: 3902068
Number of extensions: 11431393
Number of successful extensions: 110889
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110413
Number of HSP's gapped (non-prelim): 462
length of query: 346
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 324
effective length of database: 17,147,199,772
effective search space: 5555692726128
effective search space used: 5555692726128
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)