>ref|XM_465561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3440

 Score =  135 bits (68), Expect = 1e-28
 Identities = 215/263 (81%), Gaps = 12/263 (4%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtccggcgccgcggcgccccggccggcgagatgaggagccccttccggctacccgccgcc 190
           ||||| ||||||||| | |||||||||| ||||||   ||||| | |||  | | |||||
Sbjct: 112 gtccgccgccgcggcactccggccggcgggatgag---cccctccgggcggctccccgcc 168

                                                                       
Query: 191 cccttcgtatccgcgctcgtcctcctcatgctcgctctggttccgtccccggaggcggcc 250
           |||||||| | | | |||||||| ||  ||||||||||||| ||||| ||||||||||||
Sbjct: 169 cccttcgtcttccccctcgtcctgctgctgctcgctctggtgccgtcaccggaggcggcc 228

                                                                       
Query: 251 gagaccaccacaccggggacccggacgcgcaagctcggccccggcggctcttcctcggtg 310
           ||| ||||    |||||||| |||||||||||| |||||  || ||      ||||||||
Sbjct: 229 gagtccacg---ccggggacgcggacgcgcaagatcggcggcgccg------cctcggtg 279

                                                                       
Query: 311 ttctcgctcttcaacctcaagccccagagcaagttctggacggaatcggtcatgcggaca 370
           |||||||||||||||||||||||||||| |||||||||| |||| || ||||| || || 
Sbjct: 280 ttctcgctcttcaacctcaagccccagaacaagttctggtcggagtccgtcatccgcacg 339

                                  
Query: 371 gagttcgatgacctggtgggctc 393
           || ||||||||| ||| ||||||
Sbjct: 340 gaattcgatgacttggagggctc 362

>dbj|AK066401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063N21, full
           insert sequence
          Length = 3439

 Score =  127 bits (64), Expect = 4e-26
 Identities = 214/263 (81%), Gaps = 12/263 (4%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtccggcgccgcggcgccccggccggcgagatgaggagccccttccggctacccgccgcc 190
           ||||| ||||||||| | |||||||||| ||||||   ||||| | |||  | | |||||
Sbjct: 112 gtccgccgccgcggcactccggccggcgggatgag---cccctccgggcggctccccgcc 168

                                                                       
Query: 191 cccttcgtatccgcgctcgtcctcctcatgctcgctctggttccgtccccggaggcggcc 250
           |||||||| | | | |||||||| ||  || |||||||||| ||||| ||||||||||||
Sbjct: 169 cccttcgtcttccccctcgtcctgctgctgttcgctctggtgccgtcaccggaggcggcc 228

                                                                       
Query: 251 gagaccaccacaccggggacccggacgcgcaagctcggccccggcggctcttcctcggtg 310
           ||| ||||    |||||||| |||||||||||| |||||  || ||      ||||||||
Sbjct: 229 gagtccacg---ccggggacgcggacgcgcaagatcggcggcgccg------cctcggtg 279

                                                                       
Query: 311 ttctcgctcttcaacctcaagccccagagcaagttctggacggaatcggtcatgcggaca 370
           |||||||||||||||||||||||||||| |||||||||| |||| || ||||| || || 
Sbjct: 280 ttctcgctcttcaacctcaagccccagaacaagttctggtcggagtccgtcatccgcacg 339

                                  
Query: 371 gagttcgatgacctggtgggctc 393
           || ||||||||| ||| ||||||
Sbjct: 340 gaattcgatgacttggagggctc 362

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 110/131 (83%), Gaps = 9/131 (6%)
 Strand = Plus / Plus

                                                                            
Query: 233      ccgtccccggaggcggccgagaccaccacaccggggacccggacgcgcaagctcggcccc 292
                ||||| ||||||||||||||| ||||    |||||||| |||||||||||| |||||  |
Sbjct: 15936110 ccgtcaccggaggcggccgagtccacg---ccggggacgcggacgcgcaagatcggcggc 15936166

                                                                            
Query: 293      ggcggctcttcctcggtgttctcgctcttcaacctcaagccccagagcaagttctggacg 352
                | ||      |||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 15936167 gccg------cctcggtgttctcgctcttcaacctcaagccccagaacaagttctggtcg 15936220

                           
Query: 353      gaatcggtcat 363
                || || |||||
Sbjct: 15936221 gagtccgtcat 15936231

>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 110/131 (83%), Gaps = 9/131 (6%)
 Strand = Plus / Plus

                                                                         
Query: 233   ccgtccccggaggcggccgagaccaccacaccggggacccggacgcgcaagctcggcccc 292
             ||||| ||||||||||||||| ||||    |||||||| |||||||||||| |||||  |
Sbjct: 79785 ccgtcaccggaggcggccgagtccacg---ccggggacgcggacgcgcaagatcggcggc 79841

                                                                         
Query: 293   ggcggctcttcctcggtgttctcgctcttcaacctcaagccccagagcaagttctggacg 352
             | ||      |||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 79842 gccg------cctcggtgttctcgctcttcaacctcaagccccagaacaagttctggtcg 79895

                        
Query: 353   gaatcggtcat 363
             || || |||||
Sbjct: 79896 gagtccgtcat 79906

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 136      gcgccgcggcgccccggccggcgag 160
                |||||||||||||| ||||||||||
Sbjct: 28392563 gcgccgcggcgcccgggccggcgag 28392539

>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 136    gcgccgcggcgccccggccggcgag 160
              |||||||||||||| ||||||||||
Sbjct: 118126 gcgccgcggcgcccgggccggcgag 118102

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     gcgcaagctcggccccggcg 296
               ||||||||||||||||||||
Sbjct: 3025107 gcgcaagctcggccccggcg 3025126

>ref|XM_957564.1| Neurospora crassa OR74A hypothetical protein ( (AF401237)
            cystathionine beta-lyase [Neurospora crassa OR74A] )
            (NCU07987.1) partial mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  gaggcggccgagaccaccac 261
            ||||||||||||||||||||
Sbjct: 1333 gaggcggccgagaccaccac 1352

>ref|XM_328692.1| Neurospora crassa OR74A hypothetical protein ( (AF401237)
            cystathionine beta-lyase [Neurospora crassa OR74A] )
            (NCU07987.1) partial mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  gaggcggccgagaccaccac 261
            ||||||||||||||||||||
Sbjct: 1333 gaggcggccgagaccaccac 1352

>ref|XM_534089.2| PREDICTED: Canis familiaris similar to HMT1 hnRNP
           methyltransferase-like 3, transcript variant 1
           (LOC476887), mRNA
          Length = 1864

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 132 tccggcgccgcggcgccccggccg 155
           |||| |||||||||||||||||||
Sbjct: 167 tccgccgccgcggcgccccggccg 144

>emb|AL592043.7| Human DNA sequence from clone RP11-281B1 on chromosome Xp21.3-22.12
              Contains part of a novel gene, an arginine/serine-rich
              splicing factor 2 (SFRS2) pseudogene and a CpG island,
              complete sequence
          Length = 184391

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      aagaaacagaagacaccatc 22
              ||||||||||||||||||||
Sbjct: 152283 aagaaacagaagacaccatc 152264

>gb|AC183606.2| Pan troglodytes BAC clone CH251-286M5 from chromosome 12, complete
             sequence
          Length = 171738

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aagaaacagaagacaccatc 22
             ||||||||||||||||||||
Sbjct: 24768 aagaaacagaagacaccatc 24749

>emb|AL356440.11| Human DNA sequence from clone RP1-299F11 on chromosome 11 Contains part
             of a gene similar to D.melanogaster protein (CG14464),
             STSs, GSSs and a CpG island, complete sequence
          Length = 54446

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   ttccgtccccggaggcggcc 250
             ||||||||||||||||||||
Sbjct: 43010 ttccgtccccggaggcggcc 42991

>gb|AC027667.20| Homo sapiens 12 BAC RP11-972L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157801

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aagaaacagaagacaccatc 22
             ||||||||||||||||||||
Sbjct: 30115 aagaaacagaagacaccatc 30096

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 127     cggtgtccggcgccgcggcg 146
               ||||||||||||||||||||
Sbjct: 3224758 cggtgtccggcgccgcggcg 3224777

>gb|AF401237.1|AF401237 Neurospora crassa cystathionine beta-lyase (met-2) gene, complete cds
          Length = 2875

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 242  gaggcggccgagaccaccac 261
            ||||||||||||||||||||
Sbjct: 2638 gaggcggccgagaccaccac 2657

>gb|AC013731.10| Homo sapiens BAC clone RP11-546J1 from 2, complete sequence
          Length = 151851

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     gatgaactgagacagtagca 66
              ||||||||||||||||||||
Sbjct: 102412 gatgaactgagacagtagca 102431

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 202     cgcgctcgtcctcctcatgc 221
               ||||||||||||||||||||
Sbjct: 7474005 cgcgctcgtcctcctcatgc 7473986

>gb|AC084357.23| Homo sapiens 12q BAC RP11-415I12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188527

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aagaaacagaagacaccatc 22
              ||||||||||||||||||||
Sbjct: 119132 aagaaacagaagacaccatc 119151

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     gcgccgcggcgccccggccg 155
               ||||||||||||||||||||
Sbjct: 1342244 gcgccgcggcgccccggccg 1342225



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 134   cggcgccgcggcgccccggccggc 157
             |||||||||||||||| |||||||
Sbjct: 77505 cggcgccgcggcgcccgggccggc 77528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,060,179
Number of Sequences: 3902068
Number of extensions: 3060179
Number of successful extensions: 60804
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60048
Number of HSP's gapped (non-prelim): 752
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)