ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-... 33 0.35
2MARK3_HUMAN (P27448) MAP/microtubule affinity-regulating kinase ... 33 0.45
3OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-bind... 32 1.0
4MARK3_MOUSE (Q03141) MAP/microtubule affinity-regulating kinase ... 32 1.0
5MARK1_RAT (O08678) Serine/threonine-protein kinase MARK1 (EC 2.7... 31 1.3
6HS12B_MOUSE (Q9CZJ2) Heat shock 70 kDa protein 12B 31 1.7
7RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C... 31 1.7
8MARK1_MOUSE (Q8VHJ5) Serine/threonine-protein kinase MARK1 (EC 2... 30 2.3
9SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... 30 2.3
10PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC... 30 2.3
11JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2) 30 2.9
12MRE11_NEUCR (Q9C291) Double-strand break repair protein mus-23 (... 30 3.8
13ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V... 30 3.8
14ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (E... 30 3.8
15V70K_TYMV (P10357) 69 kDa protein 29 5.0
16FHL1_YEAST (P39521) Pre-rRNA-processing protein FHL1 29 5.0
17RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (R... 29 5.0
18RDRP_SBMV (P21405) Probable RNA-directed RNA polymerase (EC 2.7.... 29 5.0
19MARK4_HUMAN (Q96L34) MAP/microtubule affinity-regulating kinase ... 29 5.0
20HYPF_AZOCH (Q43950) Carbamoyltransferase hypF (EC 2.1.3.-) (Carb... 29 5.0
21HYR1_CANAL (P46591) Hyphally-regulated protein precursor 29 5.0
22MARK3_RAT (Q8VHF0) MAP/microtubule affinity-regulating kinase 3 ... 29 6.6
23XRN2_HUMAN (Q9H0D6) 5'-3' exoribonuclease 2 (EC 3.1.11.-) (DHM1-... 29 6.6
24V70K_TYMVA (P20131) 69 kDa protein 29 6.6
25PQN8_CAEEL (P34291) Glutamine/asparagine-rich protein pqn-8 29 6.6
26HEPA_HHV2H (P89431) DNA helicase/primase complex-associated protein 29 6.6
27P2RX1_RAT (P47824) P2X purinoceptor 1 (ATP receptor) (P2X1) (Pur... 29 6.6
28P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (P... 29 6.6
29HYPF_AZOVI (P40596) Carbamoyltransferase hypF (EC 2.1.3.-) (Carb... 29 6.6
30MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (... 29 6.6
31NDC1_BRARE (Q7SZC5) Nucleoporin NDC1 (Transmembrane protein 48) 28 8.6
32V70K_TYMVC (P28478) 69 kDa protein 28 8.6
33IF2_THEFY (Q47RV1) Translation initiation factor IF-2 28 8.6
34Y011_NPVOP (Q65359) Hypothetical 37.2 kDa protein (ORF11) (ORF 10) 28 8.6
35HS12B_HUMAN (Q96MM6) Heat shock 70 kDa protein 12B 28 8.6
36GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Co... 28 8.6

>CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-containing|
           homolog)
          Length = 377

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = -3

Query: 241 AGCVPSSGKVSPERRTGWIGVGEILGLQQEGPEH 140
           AG  PSSG  +P R TG+ G+ EILGL +E P H
Sbjct: 34  AGAKPSSGP-TPPRCTGF-GIQEILGLNKEPPSH 65



to top

>MARK3_HUMAN (P27448) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)|
           (Cdc25C-associated protein kinase 1) (cTAK1) (C-TAK1)
           (Serine/threonine protein kinase p78) (Ser/Thr protein
           kinase PAR-1) (Protein kinase STK10)
          Length = 776

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -1

Query: 432 VASNPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSA 253
           V  N + ++++  + T  A  HS S + T    R P G+  R  F G+    RR++ ++ 
Sbjct: 544 VIQNGKENSTIPDQRTPVASTHSISSAATPDRIRFPRGTASRSTFHGQPR-ERRTATYNG 602

Query: 252 EFQLPAASHQA 220
               P+ SH+A
Sbjct: 603 PPASPSLSHEA 613



to top

>OSBP2_HUMAN (Q969R2) Oxysterol-binding protein 2 (Oxysterol-binding|
           protein-related protein 4) (OSBP-related protein 4)
           (ORP-4)
          Length = 916

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 21/63 (33%), Positives = 25/63 (39%)
 Frame = -1

Query: 450 SSLVSWVASNPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRR 271
           S  VS   S P P A     + + +   S S SG G+GP T A S       G     R 
Sbjct: 80  SEPVSETTSEPEPGAGQPSELLQGSRPGSESSSGVGAGPFTKAASEPLSRAVGSATFLRP 139

Query: 270 SSG 262
            SG
Sbjct: 140 ESG 142



to top

>MARK3_MOUSE (Q03141) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)|
           (MPK-10) (ELKL motif kinase 2)
          Length = 753

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = -1

Query: 432 VASNPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSA 253
           V  N + ++++    T  A  HS S + T    R P G+  R  F G+    RR++ ++ 
Sbjct: 521 VIQNGKENSAIPDERTPVASTHSISSATTPDRIRFPRGTASRSTFHGQPR-ERRTATYNG 579

Query: 252 EFQLPAASHQA 220
               P+ SH+A
Sbjct: 580 PPASPSLSHEA 590



to top

>MARK1_RAT (O08678) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 1)
          Length = 793

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/42 (45%), Positives = 23/42 (54%)
 Frame = -1

Query: 381 SAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFS 256
           S  AHS S S T    R P GS+ R  F GE+   RRS+ +S
Sbjct: 588 SPSAHSISAS-TPDRTRFPRGSSSRSTFHGEQLRERRSAAYS 628



to top

>HS12B_MOUSE (Q9CZJ2) Heat shock 70 kDa protein 12B|
          Length = 685

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +1

Query: 130 PHSRVQALLAATQGSLPLQSIQFVVPDLLFRLMGRSRQLKFR*KT*GSARWVPLSPEFST 309
           PH  ++ L  A+ G      +      LL R+ G     KF+ +    A WV L+  F  
Sbjct: 336 PHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIAKFKRQR--PAAWVDLTIAFEA 393

Query: 310 HRRTRG 327
            +RT G
Sbjct: 394 RKRTAG 399



to top

>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)|
          Length = 966

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 416 APARRWSPGSRAAPGRTLPPFQELAVAQEPP 324
           AP++  SPG    PG+ LPP ++ + +QE P
Sbjct: 423 APSKNPSPGQELPPGQDLPPSKDPSPSQELP 453



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 413 PARRWSPGSRAAPGRTLPPFQELAVAQEPPR 321
           P R+ S G  AAPG   P  +++A   +PP+
Sbjct: 495 PPRKDSSGQEAAPGPESPSSEDIATCPKPPQ 525



to top

>MARK1_MOUSE (Q8VHJ5) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase 1) (ELKL
           motif serine/threonine-protein kinase 3)
          Length = 795

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = -1

Query: 381 SAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEFQLPA 235
           S  AHS S S T    R P GS+ R  F GE+   RRS+ ++     P+
Sbjct: 588 SPSAHSISAS-TPDRTRFPRGSSSRSTFHGEQLRERRSAAYNGRPASPS 635



to top

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -1

Query: 420 PRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSS 265
           P P  + +P+++   G HS++ +G    P  P         + +R PS +S+
Sbjct: 655 PPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSA 706



to top

>PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC 3.1.3.16)|
          Length = 549

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = +2

Query: 167 KDLSHSNPSSSSFRTYFSA*WDAAGS*NSAEKPEDLRDGFRSPRNS 304
           ++ ++S+PSS SF +Y+S+   A+ S +S  K   L    +SP +S
Sbjct: 152 RESNYSSPSSYSFSSYYSSATSASSSTSSFLKSSGLSSRVKSPSSS 197



to top

>JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)|
          Length = 694

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = -1

Query: 420 PRPSASMEPRITRSA--GAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEF 247
           PRP AS +  +   A  G  S    G GS P TPA +       G R+P+R +S   A  
Sbjct: 494 PRPGASKDGLLGPGAWNGEPSGGSGGEGSRPATPAAAG-----AGRRSPARPASEHMAIE 548

Query: 246 QL---PAASHQAE 217
            L   PA S + E
Sbjct: 549 ALQAPPAPSREPE 561



to top

>MRE11_NEUCR (Q9C291) Double-strand break repair protein mus-23 (Recombinational|
           repair protein mus-23)
          Length = 760

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -2

Query: 452 RAAWCRGWR-RTLAPARRWSPGSRAAPGRTLPPFQELAVAQEPP 324
           RAA  RG   +T A A++ +PG +AAP +   P ++ A A++ P
Sbjct: 616 RAAPKRGAAAKTTAAAKKAAPGKKAAPAKKAAPAKKAAPAKKAP 659



to top

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = -2

Query: 416 APARRWSPGSRAAPGRTLPPFQELAVAQEPPRVL 315
           A ARR    + AA GRT PP ++   AQEPP V+
Sbjct: 333 AQARRVGEDAAAAEGRT-PPARQPRAAQEPPIVI 365



to top

>ATXR5_ARATH (Q8VZJ1) Histone-lysine N-methyltransferase ATXR5 (EC 2.1.1.43)|
           (Trithorax-related protein 5) (TRX-related protein 5)
           (Protein SET DOMAIN GROUP 15)
          Length = 352

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
 Frame = -2

Query: 449 AAWCRGWRRTLAPARRWSPGSRAAPGRTLPPFQELAVAQEPPRVLRCVE----------- 303
           A+ C   RRT APARR  P S + P R +    E+ +A+  P V +  E           
Sbjct: 11  ASPCSSRRRTKAPARR--PSSESPPPRKMKSMAEI-MAKSVPVVEQEEEEDEDSYSNVTC 67

Query: 302 ---NSGESGTHLADPQVFQRNFNCR-LRPIKRKSKSGTTNWMDWSGRDP 168
               SGE    L       R F+ + LRPI  +   GT   +D S + P
Sbjct: 68  EKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCSDQRP 116



to top

>V70K_TYMV (P10357) 69 kDa protein|
          Length = 628

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 28/103 (27%), Positives = 39/103 (37%)
 Frame = +2

Query: 143 FRPFLLQPKDLSHSNPSSSSFRTYFSA*WDAAGS*NSAEKPEDLRDGFRSPRNSRRIVEP 322
           FRP LL      H +P  SS R   S    +     +  +P    + F SPR    + + 
Sbjct: 181 FRPILLPKVVHVHDDPPHSSLRPRGSR---SRQLQPTVRRPLLAPNQFHSPRQPPPLSDD 237

Query: 323 AGVLGPLPVPEMEEECAPALRVIRGSIDALGRGFDATHDTRLL 451
            G+LGP P+        P   +  G  +        THD R L
Sbjct: 238 PGILGPRPLAPHSTRDPPPRPITPGPSN--------THDLRPL 272



to top

>FHL1_YEAST (P39521) Pre-rRNA-processing protein FHL1|
          Length = 936

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/81 (23%), Positives = 38/81 (46%)
 Frame = -1

Query: 432  VASNPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSA 253
            V + P+P  + +  +   +G  SSS S + SG  + +GS    +     +    S+   +
Sbjct: 798  VDAQPKPKPAQDNDLESESGTSSSSSSSSESGSESDSGSD---DGSASGSGDNSSTSSES 854

Query: 252  EFQLPAASHQAEK*VRNDELD 190
            E +  + S   EK  +N+++D
Sbjct: 855  ESESDSGSEVDEKNNKNEKID 875



to top

>RGS3_HUMAN (P49796) Regulator of G-protein signaling 3 (RGS3) (RGP3)|
          Length = 1198

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 413 PARRWSPGSRAAPGRTLPPFQELAVAQEP 327
           P++  SPG    PG+ LPP ++    QEP
Sbjct: 706 PSKEPSPGQELPPGQDLPPNKDSPSGQEP 734



to top

>RDRP_SBMV (P21405) Probable RNA-directed RNA polymerase (EC 2.7.7.48)|
          Length = 956

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 420 PRPSASMEPRITRSA----GAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSG 262
           P+P A+    IT S+    G     +SG   GP T + S + R+ R  R+  + S G
Sbjct: 504 PKPRATSSKPITTSSPGTPGRSPLPVSGKELGPSTQSSSKLSRKQRRRRSTEKASPG 560



to top

>MARK4_HUMAN (Q96L34) MAP/microtubule affinity-regulating kinase 4 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase-like 1)
          Length = 752

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 423 NPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSG 262
           N + ++S  PR+  ++ +  S    +G   R   GST+R  F G +   RR+ G
Sbjct: 528 NGKENSSGTPRVPPASPSSHSLAPPSGERSRLARGSTIRSTFHGGQVRDRRAGG 581



to top

>HYPF_AZOCH (Q43950) Carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl|
           phosphate-converting enzyme hypF) ([NiFe]-hydrogenase
           maturation factor hypF) (Hydrogenase maturation protein
           hypF)
          Length = 776

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 326 GVLGPLPVPEMEEECAPALRVIRGSIDALGRG 421
           G L PLP+P  ++      R+  G++ ALGRG
Sbjct: 556 GELNPLPLPGGDQAAREPWRMAAGALHALGRG 587



to top

>HYR1_CANAL (P46591) Hyphally-regulated protein precursor|
          Length = 937

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
 Frame = -1

Query: 426  SNPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRR---SSGFS 256
            SNP           + +G  S + SG GSGP   +GS          N        SG  
Sbjct: 741  SNPGAGNGSNEGSGQGSGNGSEAGSGQGSGPNNGSGSGHNDGSGSGSNQGSNPGAGSGSG 800

Query: 255  AEFQLPAASHQ-AEK*VRNDELDGLEWERSLGCSKKGLNT 139
            +E    A SH  + +  + D ++G   E     SK G NT
Sbjct: 801  SESGSKAGSHSGSNEGAKTDSIEGFHTE-----SKPGFNT 835



to top

>MARK3_RAT (Q8VHF0) MAP/microtubule affinity-regulating kinase 3 (EC 2.7.11.1)|
          Length = 797

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -1

Query: 387 TRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSRRSSGFSAEFQLPAASHQA 220
           T  A  HS S + T    R P G+  R  F G+    RR++ ++     P+ SH+A
Sbjct: 589 TPVASTHSISSATTPDRIRFPRGTASRSTFHGQPR-ERRTATYNGPPASPSLSHEA 643



to top

>XRN2_HUMAN (Q9H0D6) 5'-3' exoribonuclease 2 (EC 3.1.11.-) (DHM1-like protein)|
           (DHP protein)
          Length = 950

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 11/98 (11%)
 Frame = -1

Query: 438 SWVASNPRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGERNPSR----- 274
           S VASNPR +A        S+ + S + S T  G  +P G   R+    +  P       
Sbjct: 451 SQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPLGGIKRKAEDSDSEPEPEDNVR 510

Query: 273 ------RSSGFSAEFQLPAASHQAEK*VRNDELDGLEW 178
                 +   +  +F + AA  +  + V    ++GL W
Sbjct: 511 LWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCW 548



to top

>V70K_TYMVA (P20131) 69 kDa protein|
          Length = 628

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 24/91 (26%), Positives = 35/91 (38%)
 Frame = +2

Query: 143 FRPFLLQPKDLSHSNPSSSSFRTYFSA*WDAAGS*NSAEKPEDLRDGFRSPRNSRRIVEP 322
           FRP LL      H +P  SS R   S    +     +  +P    + F SPR    + + 
Sbjct: 181 FRPILLPEVVHVHDDPPHSSLRPGRSR---SRQLQPTIRRPLLAPNQFNSPRQPPPLSDD 237

Query: 323 AGVLGPLPVPEMEEECAPALRVIRGSIDALG 415
            G+LGP P+        P   +  G  +  G
Sbjct: 238 PGILGPCPLAPNSTRDPPPRPITPGPFNTHG 268



to top

>PQN8_CAEEL (P34291) Glutamine/asparagine-rich protein pqn-8|
          Length = 401

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -3

Query: 274 QILRFFSGISTAGCVPSSGKVSPERRTGWIGVGEILGLQQE 152
           Q  R ++G S++GCVP++  + P+    W     I GLQ E
Sbjct: 31  QQYRAYAGCSSSGCVPAT--IVPKSSGFWPNADMIAGLQTE 69



to top

>HEPA_HHV2H (P89431) DNA helicase/primase complex-associated protein|
          Length = 752

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -2

Query: 446 AWCRGWRRTLAPARRWSPGSRAAPGRTLPPFQELAVAQEP 327
           AW     R + P R W   +  A GR LP F+E      P
Sbjct: 349 AWPAVGARVVLPPRAWPAVASEAAGRLLPAFREAVARWHP 388



to top

>P2RX1_RAT (P47824) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic|
           receptor) (RP-2 protein)
          Length = 399

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 334 KNPRGFY---DASRIPGRAEPISQILRFFSGISTAGCVPSSGKVSPERRTGWIGV 179
           +NP G     D+   PG+AE  +Q      GI T  CVP +G V      GW  V
Sbjct: 119 ENPEGGICQDDSGCTPGKAERKAQ------GIRTGNCVPFNGTVKTCEIFGWCPV 167



to top

>P2RX1_MOUSE (P51576) P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic|
           receptor)
          Length = 399

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 334 KNPRGFY---DASRIPGRAEPISQILRFFSGISTAGCVPSSGKVSPERRTGWIGV 179
           +NP G     D+   PG+AE  +Q      GI T  CVP +G V      GW  V
Sbjct: 119 ENPEGGICQDDSGCTPGKAERKAQ------GIRTGNCVPFNGTVKTCEIFGWCPV 167



to top

>HYPF_AZOVI (P40596) Carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl|
           phosphate-converting enzyme hypF) ([NiFe]-hydrogenase
           maturation factor hypF) (Hydrogenase maturation protein
           hypF)
          Length = 776

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 326 GVLGPLPVPEMEEECAPALRVIRGSIDALGRG 421
           G L PLP+P  ++      R+  G++ ALGRG
Sbjct: 556 GELNPLPLPGGDQASREPWRMAAGALHALGRG 587



to top

>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 411 SASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMR 307
           + S  PR    +   S++ SG G+GP  P+G+T+R
Sbjct: 477 TTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLR 511



to top

>NDC1_BRARE (Q7SZC5) Nucleoporin NDC1 (Transmembrane protein 48)|
          Length = 671

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -1

Query: 432 VASNPRPSASMEPRITRSAGAHSSSISGTGSGPRTP 325
           VASN R  +      TRSA + SS +SG    P TP
Sbjct: 377 VASNGRVKSQSASSDTRSASSSSSVLSGMEDVPETP 412



to top

>V70K_TYMVC (P28478) 69 kDa protein|
          Length = 628

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = +2

Query: 143 FRPFLLQPKDLSHSNPSSSSFRTYFSA*WDAAGS*NSAEKPEDLRDGFRSPRNSRRIVEP 322
           FRP LL      H +P  SS R   S    +     +  +P    + F SPR    + + 
Sbjct: 181 FRPILLPKVVHVHDDPPHSSLRPRGSR---SRQLQPTVRRPLLAPNQFHSPRQPPPLSDD 237

Query: 323 AGVLGPLPV 349
            G+LGP P+
Sbjct: 238 PGILGPRPL 246



to top

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
 Frame = -1

Query: 429 ASNPRPSASMEPRITRSAGAHSSSISGTGSGPR--TPAGSTMRREFRGERNPSRRSSGFS 256
           AS P P     P  +  +G       G G+GPR     G   R  F G     R   G +
Sbjct: 256 ASRPTPPGGARPSTSSRSGGGRGRGGGGGAGPRGGGAGGGAPRTGFGGRPGGGRGRGGTA 315

Query: 255 AEFQLP 238
             F  P
Sbjct: 316 GAFGRP 321



to top

>Y011_NPVOP (Q65359) Hypothetical 37.2 kDa protein (ORF11) (ORF 10)|
          Length = 331

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 350 PEMEEECAPALRVIRGSIDALGRGFDATHDTRLLY 454
           P  E  CAPA+  + G   A+GR   A H T  ++
Sbjct: 206 PNDEGNCAPAIAAVYGRFCAIGREHFAHHKTACMH 240



to top

>HS12B_HUMAN (Q96MM6) Heat shock 70 kDa protein 12B|
          Length = 686

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +1

Query: 130 PHSRVQALLAATQGSLPLQSIQFVVPDLLFRLMGRSRQLKFR*KT*GSARWVPLSPEFST 309
           PH  ++ L  A+ G      +      LL R+ G      F+ +    A WV L+  F  
Sbjct: 336 PHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFKRQR--PAAWVDLTIAFEA 393

Query: 310 HRRTRG 327
            +RT G
Sbjct: 394 RKRTAG 399



to top

>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 580

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -1

Query: 420 PRPSASMEPRITRSAGAHSSSISGTGSGPRTPAGSTMRREFRGER-NPSRRS 268
           P PS+ +   +T     +        SGPRTPA S +    R  R NP+  S
Sbjct: 217 PDPSSPLIDLLTEEPPPYPGGHGPPPSGPRTPAASPIASRLRERRENPAEES 268


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,142,277
Number of Sequences: 219361
Number of extensions: 1539379
Number of successful extensions: 6658
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 5803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6639
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top