ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp) 32 1.3
2IRAK1_HUMAN (P51617) Interleukin-1 receptor-associated kinase 1 ... 30 4.8
3WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp) 30 4.8
4TNK1_HUMAN (Q13470) Non-receptor tyrosine-protein kinase TNK1 (E... 30 4.8

>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 245 PDPHPSPGTGTVHPSFTPLFVSADALRPRAGKGS 144
           P P PS G G   P   P  V A  L P  G+G+
Sbjct: 399 PPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRGA 432



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>IRAK1_HUMAN (P51617) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)|
           (IRAK-1)
          Length = 712

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2

Query: 245 PDPHPSPGTGTVHPSFTPLFVSADALRPRAGKGSA 141
           P P PSPGT    PS  P    A+A  PR    SA
Sbjct: 105 PAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSA 139



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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 245 PDPHPSPGTGTVHPSFTPLFVSADALRPRAGKGS 144
           P P P PG+G   P   P  VS  +  P  G+G+
Sbjct: 418 PPPPPCPGSGPAPPPLPPTPVSGGSPAPGGGRGA 451



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>TNK1_HUMAN (Q13470) Non-receptor tyrosine-protein kinase TNK1 (EC 2.7.10.2)|
           (CD38 negative kinase 1)
          Length = 666

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
 Frame = -2

Query: 209 HPSFTPLFVSADALRPRAGKGSACCGSLLLWLRVRGLGSGNTAELEEEDE---------- 60
           HP+  P F   + L   AG   ACC        VR +       +E  D           
Sbjct: 363 HPADRPSFSHLEGLLQEAGPSEACC--------VRDVTEPGALRMETGDPITVIEGSSSF 414

Query: 59  HTP*SFCWGGRNQRS 15
           H+P S  W G+N R+
Sbjct: 415 HSPDSTIWKGQNGRT 429


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,603,693
Number of Sequences: 219361
Number of extensions: 1089550
Number of successful extensions: 2909
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2905
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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