ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 8e-15
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
4emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa... 78 3e-11
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 70 8e-09
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 70 8e-09
7emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb... 70 8e-09
8emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa... 70 8e-09
9emb|Z81058.1|CEF11E6 Caenorhabditis elegans Cosmid F11E6, comple... 44 0.44
10gb|AC121777.3| Mus musculus BAC clone RP23-359A23 from chromosom... 44 0.44
11emb|CR848754.3| Zebrafish DNA sequence from clone CH211-162G12 i... 44 0.44
12ref|NM_141494.1| Drosophila melanogaster CG10445-RA (CG10445), mRNA 44 0.44
13ref|NM_070715.3| Caenorhabditis elegans F11E6.3 (F11E6.3) mRNA, ... 44 0.44
14gb|BT022847.1| Drosophila melanogaster IP13006 full insert cDNA 44 0.44
15gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, r... 44 0.44
16emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 i... 44 0.44
17ref|XM_320097.2| Anopheles gambiae str. PEST ENSANGP00000010655 ... 44 0.44
18gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14... 44 0.44
19emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones... 44 0.44
20ref|XM_466673.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
21gb|AY714053.1| Homo sapiens inner centromere protein (INCENP) mR... 42 1.7
22gb|BT018273.1| Zea mays clone EL01T0203E03.c mRNA sequence 42 1.7
23gb|AC148409.2| X. tropicalis BAC clone ISB1-267G18 containing ge... 42 1.7
24gb|AC161126.3| Pan troglodytes BAC clone CH251-595C13 from chrom... 42 1.7
25gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete se... 42 1.7
26gb|AC108416.5| Mus musculus chromosome 14, clone RP23-114J12, co... 42 1.7
27gb|BC042489.1| Mus musculus mRNA similar to RIKEN cDNA 2300006C1... 42 1.7
28ref|NM_027088.2| Mus musculus Brca1 associated protein 1 (Bap1),... 42 1.7
29gb|BC111732.1| Homo sapiens inner centromere protein antigens 13... 42 1.7
30ref|NM_020238.1| Homo sapiens inner centromere protein antigens ... 42 1.7
31emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chr... 42 1.7
32gb|BC098576.1| Homo sapiens inner centromere protein antigens 13... 42 1.7
33emb|CR599315.1| full-length cDNA clone CS0CAP006YG16 of Thymus o... 42 1.7
34dbj|AK170576.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.7
35dbj|AK171561.1| Mus musculus B6-derived CD11 +ve dendritic cells... 42 1.7
36gb|AF282265.1|AF282265 Homo sapiens inner centromere protein INC... 42 1.7
37dbj|AK009033.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 1.7
38dbj|AK079374.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 42 1.7
39ref|NM_171275.2| Caenorhabditis elegans K08D12.6 (K08D12.6) mRNA... 42 1.7
40dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
41dbj|AB205132.1| Scutellaria baicalensis cdka2 mRNA for cyclin-de... 42 1.7
42emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in ... 42 1.7
43dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
44dbj|AK129108.1| Mus musculus mRNA for mKIAA0272 protein 42 1.7
45dbj|AK099736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
46gb|BC050901.1| Mus musculus Brca1 associated protein 1, mRNA (cD... 42 1.7
47emb|AJ544620.1|TRU544620 Takifugu rubripes utrn gene for putativ... 42 1.7
48dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 1.7
49gb|AC166061.2| Mus musculus BAC clone RP23-177N16 from chromosom... 42 1.7
50emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2... 42 1.7
51dbj|AB047820.1| Mus musculus uch-x4 mRNA for ubiquitin C-termina... 42 1.7
52gb|AY501390.1| Homo sapiens retinoic acid receptor beta 5 (RARB)... 40 6.8
53ref|NM_104067.1| Arabidopsis thaliana ATP binding / kinase/ prot... 40 6.8
54ref|NM_001034819.1| Gallus gallus bone morphogenetic protein 3 (... 40 6.8
55gb|BC030234.1| Homo sapiens retinoic acid receptor, beta, mRNA (... 40 6.8
56gb|AY731540.1| Arachis hypogaea clone PM723 microsatellite sequence 40 6.8
57gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete... 40 6.8
58gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complet... 40 6.8
59ref|XM_366745.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 6.8
60ref|NM_018748.2| Mus musculus golgi autoantigen, golgin subfamil... 40 6.8
61gb|AC158214.4| Mus musculus chromosome 7, clone RP24-208N15, com... 40 6.8
62gb|AC101980.8| Mus musculus chromosome 7, clone RP24-339E15, com... 40 6.8
63gb|AY526428.1| Arachis hypogaea clone PM672 microsatellite sequence 40 6.8
64gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, comple... 40 6.8
65gb|BC050415.2| Homo sapiens retinoic acid receptor, beta, mRNA (... 40 6.8
66gb|AY046944.1| Mesocricetus auratus retinoic acid receptor beta-... 40 6.8
67emb|CR392025.7| Zebrafish DNA sequence from clone CH211-248P17 i... 40 6.8
68gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromo... 40 6.8
69gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cd... 40 6.8
70gb|BC060794.1| Homo sapiens retinoic acid receptor, beta, transc... 40 6.8
71emb|CR735103.4| Zebrafish DNA sequence from clone CH211-13L14 in... 40 6.8
72emb|AL611926.12| Mouse DNA sequence from clone RP23-28G13 on chr... 40 6.8
73gb|BC096467.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.8
74emb|BX842612.10| Zebrafish DNA sequence from clone DKEY-5N18 in ... 40 6.8
75gb|DQ097308.1| Gallus gallus bone morphogenetic protein 3 precur... 40 6.8
76ref|NM_205080.1| Gallus gallus calpain 2, (m/II) large subunit (... 40 6.8
77gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, co... 40 6.8
78gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswel... 40 6.8
79emb|CR621137.1| full-length cDNA clone CS0DI008YJ13 of Placenta ... 40 6.8
80gb|AF016581.4| Leishmania mexicana amazonensis NupM1 (TOR) gene,... 40 6.8
81ref|NM_135199.2| Drosophila melanogaster CG31637-RA (CG31637), mRNA 40 6.8
82gb|AF051357.2| Mus musculus golgi autoantigen golgin subtype a4 ... 40 6.8
83gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, comp... 40 6.8
84ref|NM_016152.2| Homo sapiens retinoic acid receptor, beta (RARB... 40 6.8
85ref|NM_000965.2| Homo sapiens retinoic acid receptor, beta (RARB... 40 6.8
86gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, comp... 40 6.8
87gb|AC093157.2| Homo sapiens chromosome 1 clone RP11-421L21, comp... 40 6.8
88dbj|AK172292.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.8
89dbj|AK161568.1| Mus musculus adult male pituitary gland cDNA, RI... 40 6.8
90emb|CR536558.1| Homo sapiens full open reading frame cDNA clone ... 40 6.8
91gb|AY058647.1| Drosophila melanogaster LD35051 full length cDNA 40 6.8
92dbj|AB089248.1| Drosophila virilis rho mRNA for rhomboid, comple... 40 6.8
93gb|BC037641.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.8
94gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, re... 40 6.8
95tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, compl... 40 6.8
96tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 40 6.8
97gb|BC057561.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.8
98gb|BC023102.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.8
99gb|BC003268.1| Mus musculus golgi autoantigen, golgin subfamily ... 40 6.8
100gb|AF350277.1|AF350277 Nephila madagascariensis major ampullate ... 40 6.8
101dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
102dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
103gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, comple... 40 6.8
104gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, comple... 40 6.8
105gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome... 40 6.8
106gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, comp... 40 6.8
107gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-201... 40 6.8
108gb|AC026412.4| Homo sapiens chromosome 5 clone CTD-2012J19, comp... 40 6.8
109ref|XM_236718.3| PREDICTED: Rattus norvegicus similar to golgi a... 40 6.8
110gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14... 40 6.8
111dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
112dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome 40 6.8
113dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
114dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
115dbj|AP005102.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
116gb|AY893913.1| Synthetic construct Homo sapiens clone FLH127879.... 40 6.8
117gb|AY893467.1| Synthetic construct Homo sapiens clone FLH127785.... 40 6.8
118gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, p... 40 6.8
119gb|AY106081.1| Zea mays PCO081588 mRNA sequence 40 6.8
120gb|AF157483.1|AF157483 Homo sapiens retinoic acid receptor beta ... 40 6.8
121gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23... 40 6.8
122gb|AC006958.1|AC006958 Homo sapiens chromosome 5q, Bac clone 32d... 40 6.8
123gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 ... 40 6.8
124gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23... 40 6.8
125emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chro... 40 6.8
126gb|AC004251.1|AC004251 Drosophila melanogaster (P1 DS08305 (D253... 40 6.8
127gb|AC133511.3| Mus musculus BAC clone RP23-413E2 from 10, comple... 40 6.8
128gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Can... 40 6.8
129gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosom... 40 6.8
130gb|AC153540.4| Mus musculus 10 BAC RP23-356N9 (Roswell Park Canc... 40 6.8
131gb|M96023.1|HUMRAR28 Human retinoic acid receptor beta gene, exo... 40 6.8
132emb|X07282.1|HSRARE Human mRNA for retinoic acid receptor-epsilo... 40 6.8
133emb|Y00291.1|HSHAPRA Human hap mRNA encoding a DNA-binding hormo... 40 6.8
134dbj|D38026.1|CHKMCL Chicken mRNA for m-calpain large subunit (mC... 40 6.8
135emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chr... 40 6.8 
>dbj|AK101189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030E21, full
           insert sequence
          Length = 3318

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 69/76 (90%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                       
Query: 424 tgctcagcctggtttcatcagcttggattgtggnggagctgatgattacacagatggcat 483
           |||||||||||||||||||||||||||||| || ||||  ||||||||||| ||||||||
Sbjct: 314 tgctcagcctggtttcatcagcttggattgcgggggagacgatgattacacggatggcat 373

                           
Query: 484 t-ggctccagtggact 498
           | || |||||||||||
Sbjct: 374 tgggatccagtggact 389
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
              ||||||||||||||||||||||| ||||  ||||||||||| ||||||||| || |||||
Sbjct: 122790 ggtttcatcagcttggattgtgggggagacgatgattacacggatggcattgggatccag 122731

                    
Query: 493    tggact 498
              ||||||
Sbjct: 122730 tggact 122725
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
              ||||||||||||||||||||||| ||||  ||||||||||| ||||||||| || |||||
Sbjct: 122790 ggtttcatcagcttggattgtgggggagacgatgattacacggatggcattgggatccag 122731

                    
Query: 493    tggact 498
              ||||||
Sbjct: 122730 tggact 122725
to top
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147503

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/66 (90%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
              ||||||||||||||||||||||| ||||  ||||||||||| ||||||||| || |||||
Sbjct: 122790 ggtttcatcagcttggattgtgggggagacgatgattacacggatggcattgggatccag 122731

                    
Query: 493    tggact 498
              ||||||
Sbjct: 122730 tggact 122725
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/66 (89%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
              |||||||||||||||||||| || ||||  ||||||||||| ||||||||| || |||||
Sbjct: 118568 ggtttcatcagcttggattgcgggggagacgatgattacacggatggcattgggatccag 118509

                    
Query: 493    tggact 498
              ||||||
Sbjct: 118508 tggact 118503
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/66 (89%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
              |||||||||||||||||||| || ||||  ||||||||||| ||||||||| || |||||
Sbjct: 118568 ggtttcatcagcttggattgcgggggagacgatgattacacggatggcattgggatccag 118509

                    
Query: 493    tggact 498
              ||||||
Sbjct: 118508 tggact 118503
to top
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 131346

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/66 (89%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                          
Query: 434    ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
              |||||||||||||||||||| || ||||  ||||||||||| ||||||||| || |||||
Sbjct: 118568 ggtttcatcagcttggattgcgggggagacgatgattacacggatggcattgggatccag 118509

                    
Query: 493    tggact 498
              ||||||
Sbjct: 118508 tggact 118503
to top
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 161808

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 59/66 (89%), Gaps = 1/66 (1%)
 Strand = Plus / Minus

                                                                         
Query: 434   ggtttcatcagcttggattgtggnggagctgatgattacacagatggcatt-ggctccag 492
             |||||||||||||||||||| || ||||  ||||||||||| ||||||||| || |||||
Sbjct: 70177 ggtttcatcagcttggattgcgggggagacgatgattacacggatggcattgggatccag 70118

                   
Query: 493   tggact 498
             ||||||
Sbjct: 70117 tggact 70112
to top
>emb|Z81058.1|CEF11E6 Caenorhabditis elegans Cosmid F11E6, complete sequence
          Length = 36958

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 386   ctccagttccagctgctgctgctcct 411
             |||||| |||||||||||||||||||
Sbjct: 29631 ctccagctccagctgctgctgctcct 29606
to top
>gb|AC121777.3| Mus musculus BAC clone RP23-359A23 from chromosome 16, complete
             sequence
          Length = 192846

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   gcttctcttctctgctttgctt 328
             ||||||||||||||||||||||
Sbjct: 91451 gcttctcttctctgctttgctt 91472
to top
>emb|CR848754.3| Zebrafish DNA sequence from clone CH211-162G12 in linkage group 15,
            complete sequence
          Length = 19365

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 67   tcttcctccagctctgctgtgt 88
            ||||||||||||||||||||||
Sbjct: 4386 tcttcctccagctctgctgtgt 4407
to top
>ref|NM_141494.1| Drosophila melanogaster CG10445-RA (CG10445), mRNA
          Length = 2940

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 381 ttctcctccagttccagctgctgctgctcc 410
           ||||||||||||| | ||||||||||||||
Sbjct: 380 ttctcctccagttgccgctgctgctgctcc 351
to top
>ref|NM_070715.3| Caenorhabditis elegans F11E6.3 (F11E6.3) mRNA, complete cds
          Length = 1205

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 386 ctccagttccagctgctgctgctcct 411
           |||||| |||||||||||||||||||
Sbjct: 100 ctccagctccagctgctgctgctcct 125
to top
>gb|BT022847.1| Drosophila melanogaster IP13006 full insert cDNA
          Length = 3411

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 381 ttctcctccagttccagctgctgctgctcc 410
           ||||||||||||| | ||||||||||||||
Sbjct: 377 ttctcctccagttgccgctgctgctgctcc 348
to top
>gb|AC008313.3|AC008313 Drosophila melanogaster, chromosome 3R, region 84D-84E, BAC clone
              BACR11D12, complete sequence
          Length = 189596

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 381    ttctcctccagttccagctgctgctgctcc 410
              ||||||||||||| | ||||||||||||||
Sbjct: 139769 ttctcctccagttgccgctgctgctgctcc 139798
to top
>emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 in linkage group 15,
            complete sequence
          Length = 152072

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 67   tcttcctccagctctgctgtgt 88
            ||||||||||||||||||||||
Sbjct: 4383 tcttcctccagctctgctgtgt 4404
to top
>ref|XM_320097.2| Anopheles gambiae str. PEST ENSANGP00000010655
           (ENSANGG00000008166), partial mRNA
          Length = 2691

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 393 tccagctgctgctgctcctcgc 414
           ||||||||||||||||||||||
Sbjct: 443 tccagctgctgctgctcctcgc 422
to top
>gb|AE003676.4| Drosophila melanogaster chromosome 3R, section 14 of 118 of the complete
              sequence
          Length = 267607

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 381    ttctcctccagttccagctgctgctgctcc 410
              ||||||||||||| | ||||||||||||||
Sbjct: 216308 ttctcctccagttgccgctgctgctgctcc 216337
to top
>emb|AL356456.1|LMFLUNK01 Leishmania major Friedlin cosmid clones L9127,L3286,L3175,L8286,L7480,
              incomplete shotgun, assembled reads, with VERY preliminary
              annotation, complete sequence
          Length = 139597

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 393    tccagctgctgctgctcctcgc 414
              ||||||||||||||||||||||
Sbjct: 110073 tccagctgctgctgctcctcgc 110052
to top
>ref|XM_466673.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1442

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 115 agccagaggaggagggagccgcagc 139
           |||||||||||||||||| ||||||
Sbjct: 707 agccagaggaggagggagacgcagc 683
to top
>gb|AY714053.1| Homo sapiens inner centromere protein (INCENP) mRNA, complete cds
          Length = 2757

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 379  tcttctcctccagttccagctgctgctgctcct 411
            |||||||||||||||||  |||| |||||||||
Sbjct: 2275 tcttctcctccagttccctctgcagctgctcct 2243
to top
>gb|BT018273.1| Zea mays clone EL01T0203E03.c mRNA sequence
          Length = 1321

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 358 ccccatggcgtccgccgccgc 378
           |||||||||||||||||||||
Sbjct: 78  ccccatggcgtccgccgccgc 98
to top
>gb|AC148409.2| X. tropicalis BAC clone ISB1-267G18 containing gene for frzb2,
            complete sequence
          Length = 69081

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 388  ccagttccagctgctgctgct 408
            |||||||||||||||||||||
Sbjct: 6689 ccagttccagctgctgctgct 6709
to top
>gb|AC161126.3| Pan troglodytes BAC clone CH251-595C13 from chromosome 7, complete
             sequence
          Length = 187683

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 304   gctgcttctcttctctgcttt 324
             |||||||||||||||||||||
Sbjct: 22427 gctgcttctcttctctgcttt 22407
to top
>gb|AC006672.2| Caenorhabditis elegans cosmid K08D12, complete sequence
          Length = 33673

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 386   ctccagttccagctgctgctgctcc 410
             |||||| ||||||||||||||||||
Sbjct: 26814 ctccagctccagctgctgctgctcc 26838
to top
>gb|AC108416.5| Mus musculus chromosome 14, clone RP23-114J12, complete sequence
          Length = 227555

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    cctccagttccagctgctgct 405
              |||||||||||||||||||||
Sbjct: 102227 cctccagttccagctgctgct 102207
to top
>gb|BC042489.1| Mus musculus mRNA similar to RIKEN cDNA 2300006C11 gene (cDNA clone
            IMAGE:2609218)
          Length = 3871

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2973 cctccagttccagctgctgct 2953
to top
>ref|NM_027088.2| Mus musculus Brca1 associated protein 1 (Bap1), mRNA
          Length = 3406

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2525 cctccagttccagctgctgct 2505
to top
>gb|BC111732.1| Homo sapiens inner centromere protein antigens 135/155kDa, mRNA (cDNA
            clone IMAGE:40035563), containing frame-shift errors
          Length = 2888

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 379  tcttctcctccagttccagctgctgctgctcct 411
            |||||||||||||||||  |||| |||||||||
Sbjct: 2267 tcttctcctccagttccctctgcagctgctcct 2235
to top
>ref|NM_020238.1| Homo sapiens inner centromere protein antigens 135/155kDa (INCENP),
            mRNA
          Length = 3536

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 379  tcttctcctccagttccagctgctgctgctcct 411
            |||||||||||||||||  |||| |||||||||
Sbjct: 2278 tcttctcctccagttccctctgcagctgctcct 2246
to top
>emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chromosome 9 Contains the
             5'end of the protein tyrosine phosphatase (non-receptor
             type 3) gene, a novel pseudogene, apseudogene similar to
             mouse Ybox transcription factor and a CpG island, complete
             sequence
          Length = 189367

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 213   tgtgcctgtgcctgggctgggatga 237
             ||||||||||| |||||||||||||
Sbjct: 84840 tgtgcctgtgcttgggctgggatga 84816
to top
>gb|BC098576.1| Homo sapiens inner centromere protein antigens 135/155kDa, mRNA (cDNA
            clone MGC:111393 IMAGE:30924748), complete cds
          Length = 3328

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 379  tcttctcctccagttccagctgctgctgctcct 411
            |||||||||||||||||  |||| |||||||||
Sbjct: 2477 tcttctcctccagttccctctgcagctgctcct 2445
to top
>emb|CR599315.1| full-length cDNA clone CS0CAP006YG16 of Thymus of Homo sapiens
           (human)
          Length = 1469

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 379 tcttctcctccagttccagctgctgctgctcct 411
           |||||||||||||||||  |||| |||||||||
Sbjct: 668 tcttctcctccagttccctctgcagctgctcct 636
to top
>dbj|AK170576.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630109B21
            product:Brca1 associated protein 1, full insert sequence
          Length = 3407

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2526 cctccagttccagctgctgct 2506
to top
>dbj|AK171561.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F730310L20
            product:Brca1 associated protein 1, full insert sequence
          Length = 3409

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2528 cctccagttccagctgctgct 2508
to top
>gb|AF282265.1|AF282265 Homo sapiens inner centromere protein INCENP mRNA, complete cds
          Length = 3536

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 379  tcttctcctccagttccagctgctgctgctcct 411
            |||||||||||||||||  |||| |||||||||
Sbjct: 2278 tcttctcctccagttccctctgcagctgctcct 2246
to top
>dbj|AK009033.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2300006C11 product:RIKEN cDNA 2300006C11
           gene, full insert sequence
          Length = 1419

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 385 cctccagttccagctgctgct 405
           |||||||||||||||||||||
Sbjct: 538 cctccagttccagctgctgct 518
to top
>dbj|AK079374.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630047K15 product:BRCA1
            ASSOCIATED PROTEIN 1 (MYELOBLAST KIAA0272) (BRCA1
            ASSOCIATED PROTEIN-1) (UBIQUITIN CARBOXY-TERMINAL
            HYDROLASE) (CEREBRAL PROTEIN-6) homolog [Homo sapiens],
            full insert sequence
          Length = 3424

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2543 cctccagttccagctgctgct 2523
to top
>ref|NM_171275.2| Caenorhabditis elegans K08D12.6 (K08D12.6) mRNA, complete cds
          Length = 2181

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 386 ctccagttccagctgctgctgctcc 410
           |||||| ||||||||||||||||||
Sbjct: 854 ctccagctccagctgctgctgctcc 878
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 115      agccagaggaggagggagccgcagc 139
                |||||||||||||||||| ||||||
Sbjct: 24021029 agccagaggaggagggagacgcagc 24021005
to top
>dbj|AB205132.1| Scutellaria baicalensis cdka2 mRNA for cyclin-dependent kinase A2,
           complete cds
          Length = 1226

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 34  ccccagcaaaaggattacggc 54
           |||||||||||||||||||||
Sbjct: 825 ccccagcaaaaggattacggc 845
to top
>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15,
             complete sequence
          Length = 185137

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    catcttcttcctccagctctg 82
             |||||||||||||||||||||
Sbjct: 44799 catcttcttcctccagctctg 44819
to top
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1476_F05
          Length = 125426

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 115   agccagaggaggagggagccgcagc 139
             |||||||||||||||||| ||||||
Sbjct: 56067 agccagaggaggagggagacgcagc 56043
to top
>dbj|AK129108.1| Mus musculus mRNA for mKIAA0272 protein
          Length = 3314

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2433 cctccagttccagctgctgct 2413
to top
>dbj|AK099736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G20, full
           insert sequence
          Length = 1443

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 115 agccagaggaggagggagccgcagc 139
           |||||||||||||||||| ||||||
Sbjct: 708 agccagaggaggagggagacgcagc 684
to top
>gb|BC050901.1| Mus musculus Brca1 associated protein 1, mRNA (cDNA clone MGC:63252
            IMAGE:6402443), complete cds
          Length = 3390

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2488 cctccagttccagctgctgct 2468
to top
>emb|AJ544620.1|TRU544620 Takifugu rubripes utrn gene for putative utrophin, exons 55-78
          Length = 56648

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 386   ctccagttccagctgctgctg 406
             |||||||||||||||||||||
Sbjct: 41854 ctccagttccagctgctgctg 41834
to top
>dbj|AP002793.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-691L4, complete
             sequence
          Length = 181140

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 379   tcttctcctccagttccagctgctgctgctcct 411
             |||||||||||||||||  |||| |||||||||
Sbjct: 68996 tcttctcctccagttccctctgcagctgctcct 68964
to top
>gb|AC166061.2| Mus musculus BAC clone RP23-177N16 from chromosome 14, complete sequence
          Length = 213071

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 397    gctgctgctgctcctcgcactctcc 421
              |||||||||||||||| ||||||||
Sbjct: 123818 gctgctgctgctcctcccactctcc 123842
to top
>emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2302E22 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 151930

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    cttctcttctctgctttgctt 328
              |||||||||||||||||||||
Sbjct: 139940 cttctcttctctgctttgctt 139920
to top
>dbj|AB047820.1| Mus musculus uch-x4 mRNA for ubiquitin C-terminal hydrolase X4,
            complete cds
          Length = 3380

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 385  cctccagttccagctgctgct 405
            |||||||||||||||||||||
Sbjct: 2426 cctccagttccagctgctgct 2406
to top
>gb|AY501390.1| Homo sapiens retinoic acid receptor beta 5 (RARB) mRNA, complete cds
          Length = 2552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1180 gctctgctgtgttcccactt 1161
to top
>ref|NM_104067.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
           serine/threonine kinase/ protein-tyrosine kinase
           AT1G51870 mRNA, complete cds
          Length = 2514

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 437 ttcatcagcttggattgtgg 456
           ||||||||||||||||||||
Sbjct: 85  ttcatcagcttggattgtgg 104
to top
>ref|NM_001034819.1| Gallus gallus bone morphogenetic protein 3 (BMP3), mRNA
          Length = 1411

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 ctgtgcctgtgcctgggctg 231
           ||||||||||||||||||||
Sbjct: 33  ctgtgcctgtgcctgggctg 52
to top
>gb|BC030234.1| Homo sapiens retinoic acid receptor, beta, mRNA (cDNA clone MGC:34062
            IMAGE:5229160), complete cds
          Length = 3141

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1668 gctctgctgtgttcccactt 1649
to top
>gb|AY731540.1| Arachis hypogaea clone PM723 microsatellite sequence
          Length = 350

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 cctagctgcttctcttctct 319
           ||||||||||||||||||||
Sbjct: 248 cctagctgcttctcttctct 267
to top
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence
          Length = 164973

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 389   cagttccagctgctgctgctcctc 412
             ||||||||| ||||||||||||||
Sbjct: 62223 cagttccaggtgctgctgctcctc 62246
to top
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence
          Length = 170975

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tcaaaccgccccactccgct 22
              ||||||||||||||||||||
Sbjct: 159300 tcaaaccgccccactccgct 159281
to top
>ref|XM_366745.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02821.4) partial mRNA
          Length = 1401

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 ccgctcttctcctccagttc 394
           ||||||||||||||||||||
Sbjct: 278 ccgctcttctcctccagttc 297
to top
>ref|NM_018748.2| Mus musculus golgi autoantigen, golgin subfamily a, 4 (Golga4),
           mRNA
          Length = 7530

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 215 cagctgctgctgctcctcgc 196
to top
>gb|AC158214.4| Mus musculus chromosome 7, clone RP24-208N15, complete sequence
          Length = 175320

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   cttctctgctttgcttgcct 332
             ||||||||||||||||||||
Sbjct: 17159 cttctctgctttgcttgcct 17140
to top
>gb|AC101980.8| Mus musculus chromosome 7, clone RP24-339E15, complete sequence
          Length = 219739

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   cttctctgctttgcttgcct 332
             ||||||||||||||||||||
Sbjct: 54896 cttctctgctttgcttgcct 54915
to top
>gb|AY526428.1| Arachis hypogaea clone PM672 microsatellite sequence
          Length = 439

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 cctagctgcttctcttctct 319
           ||||||||||||||||||||
Sbjct: 283 cctagctgcttctcttctct 302
to top
>gb|AC072052.6| Homo sapiens BAC clone CTD-2195F21 from 7, complete sequence
          Length = 137074

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   tccagctgctgctgctcctc 412
             ||||||||||||||||||||
Sbjct: 65500 tccagctgctgctgctcctc 65481
to top
>gb|BC050415.2| Homo sapiens retinoic acid receptor, beta, mRNA (cDNA clone
           IMAGE:6473008), partial cds
          Length = 2369

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  gctctgctgtgttcccactt 96
           ||||||||||||||||||||
Sbjct: 974 gctctgctgtgttcccactt 955
to top
>gb|AY046944.1| Mesocricetus auratus retinoic acid receptor beta-2 mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1750 gctctgctgtgttcccactt 1731
to top
>emb|CR392025.7| Zebrafish DNA sequence from clone CH211-248P17 in linkage group 17,
              complete sequence
          Length = 158863

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    tcctccagttccagctgctg 403
              ||||||||||||||||||||
Sbjct: 142727 tcctccagttccagctgctg 142708
to top
>gb|AC183921.2| Pan troglodytes BAC clone CH251-617M1 from chromosome unknown, complete
              sequence
          Length = 188195

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    ggagccagaggaggagggag 132
              ||||||||||||||||||||
Sbjct: 153012 ggagccagaggaggagggag 152993
to top
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     ttccagctgctgctgctcct 411
               ||||||||||||||||||||
Sbjct: 1142614 ttccagctgctgctgctcct 1142595
to top
>gb|BC060794.1| Homo sapiens retinoic acid receptor, beta, transcript variant 1, mRNA
            (cDNA clone MGC:71596 IMAGE:30341884), complete cds
          Length = 2828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1430 gctctgctgtgttcccactt 1411
to top
>emb|CR735103.4| Zebrafish DNA sequence from clone CH211-13L14 in linkage group 12,
              complete sequence
          Length = 126042

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     tcttcttcctccagctctgctgtg 87
              |||||||||||||| |||||||||
Sbjct: 105809 tcttcttcctccaggtctgctgtg 105832
to top
>emb|AL611926.12| Mouse DNA sequence from clone RP23-28G13 on chromosome 11 Contains the 5'
              end of the Camk2d gene for calcium/calmodulin-dependent
              protein kinase II delta, the 3' end of a novel gene, a
              ribosomal protein S15a (Rps15a) pseudogene, a ribosomal
              protein S2 (Rps2) pseudogene and two CpG islands, complete
              sequence
          Length = 136392

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 389    cagttccagctgctgctgctcctc 412
              ||||||| ||||||||||||||||
Sbjct: 120425 cagttcctgctgctgctgctcctc 120402
to top
>gb|BC096467.1| Mus musculus golgi autoantigen, golgin subfamily a, 4, mRNA (cDNA
           clone IMAGE:3668912), partial cds
          Length = 3088

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 216 cagctgctgctgctcctcgc 197
to top
>emb|BX842612.10| Zebrafish DNA sequence from clone DKEY-5N18 in linkage group 20
             Contains the gene for a novel protein similar to human and
             mouse complement component 1, q subcomponent-like 1
             (C1QL1) and three CpG islands, complete sequence
          Length = 141139

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 180   tgaaacaaacaatggagtgaaggaagga 207
             |||||||||||| ||| |||||||||||
Sbjct: 98716 tgaaacaaacaaaggaatgaaggaagga 98689
to top
>gb|DQ097308.1| Gallus gallus bone morphogenetic protein 3 precursor (BMP3) mRNA,
           complete cds
          Length = 1411

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 ctgtgcctgtgcctgggctg 231
           ||||||||||||||||||||
Sbjct: 33  ctgtgcctgtgcctgggctg 52
to top
>ref|NM_205080.1| Gallus gallus calpain 2, (m/II) large subunit (CAPN2), mRNA
          Length = 2723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   ctcatcttcttcctccagct 79
            ||||||||||||||||||||
Sbjct: 1188 ctcatcttcttcctccagct 1169
to top
>gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, complete sequence
          Length = 184515

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    agctgcttctcttctctgct 322
              ||||||||||||||||||||
Sbjct: 163122 agctgcttctcttctctgct 163141
to top
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 194589

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gcatcggctgaaacaaacaa 191
             ||||||||||||||||||||
Sbjct: 62154 gcatcggctgaaacaaacaa 62135
to top
>emb|CR621137.1| full-length cDNA clone CS0DI008YJ13 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 3044

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1700 gctctgctgtgttcccactt 1681
to top
>gb|AF016581.4| Leishmania mexicana amazonensis NupM1 (TOR) gene, complete cds
          Length = 4166

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 393  tccagctgctgctgctcctc 412
            ||||||||||||||||||||
Sbjct: 2536 tccagctgctgctgctcctc 2517
to top
>ref|NM_135199.2| Drosophila melanogaster CG31637-RA (CG31637), mRNA
          Length = 2677

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 cagttccagctgctgctgctcctc 412
           ||||||||| ||||||||||||||
Sbjct: 294 cagttccaggtgctgctgctcctc 271
to top
>gb|AF051357.2| Mus musculus golgi autoantigen golgin subtype a4 (Golga4) mRNA,
           complete cds
          Length = 7530

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 215 cagctgctgctgctcctcgc 196
to top
>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence
          Length = 189308

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    gctctgctgtgttcccactt 96
             ||||||||||||||||||||
Sbjct: 96359 gctctgctgtgttcccactt 96340
to top
>ref|NM_016152.2| Homo sapiens retinoic acid receptor, beta (RARB), transcript variant
            2, mRNA
          Length = 2762

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1390 gctctgctgtgttcccactt 1371
to top
>ref|NM_000965.2| Homo sapiens retinoic acid receptor, beta (RARB), transcript variant
            1, mRNA
          Length = 3119

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1747 gctctgctgtgttcccactt 1728
to top
>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence
          Length = 212555

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   ttccagctgctgctgctcct 411
             ||||||||||||||||||||
Sbjct: 70895 ttccagctgctgctgctcct 70876
to top
>gb|AC093157.2| Homo sapiens chromosome 1 clone RP11-421L21, complete sequence
          Length = 192589

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ggagccagaggaggagggag 132
             ||||||||||||||||||||
Sbjct: 37927 ggagccagaggaggagggag 37908
to top
>dbj|AK172292.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830113L12 product:golgi autoantigen,
           golgin subfamily a, 4, full insert sequence
          Length = 2305

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 264 cagctgctgctgctcctcgc 245
to top
>dbj|AK161568.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330416M02 product:golgi
           autoantigen, golgin subfamily a, 4, full insert sequence
          Length = 1406

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 268 cagctgctgctgctcctcgc 249
to top
>emb|CR536558.1| Homo sapiens full open reading frame cDNA clone RZPDo834F1120D for
           gene RARB, retinoic acid receptor, beta; complete cds,
           incl. stopcodon
          Length = 1011

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  gctctgctgtgttcccactt 96
           ||||||||||||||||||||
Sbjct: 943 gctctgctgtgttcccactt 924
to top
>gb|AY058647.1| Drosophila melanogaster LD35051 full length cDNA
          Length = 2583

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 cagttccagctgctgctgctcctc 412
           ||||||||| ||||||||||||||
Sbjct: 255 cagttccaggtgctgctgctcctc 232
to top
>dbj|AB089248.1| Drosophila virilis rho mRNA for rhomboid, complete cds
          Length = 1797

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 393 tccagctgctgctgctcctc 412
           ||||||||||||||||||||
Sbjct: 282 tccagctgctgctgctcctc 263
to top
>gb|BC037641.1| Mus musculus golgi autoantigen, golgin subfamily a, 4, mRNA (cDNA
           clone IMAGE:5066963), partial cds
          Length = 3175

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 261 cagctgctgctgctcctcgc 242
to top
>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone
             BACR30J04, complete sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     tcaaaccgccccactccgct 22
             ||||||||||||||||||||
Sbjct: 71234 tcaaaccgccccactccgct 71215
to top
>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds,
            alternatively spliced
          Length = 227735

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   tcttcttcctccagctctgc 83
            ||||||||||||||||||||
Sbjct: 3168 tcttcttcctccagctctgc 3187
to top
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively
               spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 392     ttccagctgctgctgctcct 411
               ||||||||||||||||||||
Sbjct: 1142614 ttccagctgctgctgctcct 1142595
to top
>gb|BC057561.1| Mus musculus golgi autoantigen, golgin subfamily a, 4, mRNA (cDNA
           clone IMAGE:6402416)
          Length = 2874

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 83  cagctgctgctgctcctcgc 64
to top
>gb|BC023102.1| Mus musculus golgi autoantigen, golgin subfamily a, 4, mRNA (cDNA
           clone IMAGE:3989479), containing frame-shift errors
          Length = 1676

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 151 cagctgctgctgctcctcgc 132
to top
>gb|BC003268.1| Mus musculus golgi autoantigen, golgin subfamily a, 4, mRNA (cDNA
           clone IMAGE:3499098), containing frame-shift errors
          Length = 3084

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 cagctgctgctgctcctcgc 414
           ||||||||||||||||||||
Sbjct: 216 cagctgctgctgctcctcgc 197
to top
>gb|AF350277.1|AF350277 Nephila madagascariensis major ampullate spidroin 1 (MaSp1) gene,
           partial cds
          Length = 703

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 388 ccagttccagctgctgctgctcct 411
           |||||| |||||||||||||||||
Sbjct: 376 ccagttgcagctgctgctgctcct 353
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 395     cagctgctgctgctcctcgc 414
               ||||||||||||||||||||
Sbjct: 9854003 cagctgctgctgctcctcgc 9853984
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 395      cagctgctgctgctcctcgc 414
                ||||||||||||||||||||
Sbjct: 35770871 cagctgctgctgctcctcgc 35770852



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 17      tccgctgatttcttcctccc 36
               ||||||||||||||||||||
Sbjct: 9392067 tccgctgatttcttcctccc 9392086
to top
>gb|AC010317.5| Homo sapiens chromosome 5 clone CTB-88J14, complete sequence
          Length = 149115

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ggagccagaggaggagggag 132
             ||||||||||||||||||||
Sbjct: 61997 ggagccagaggaggagggag 61978
to top
>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence
          Length = 184457

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   cccgctcgcggccgcagcgcatcg 177
             ||||||||||||||||||| ||||
Sbjct: 77592 cccgctcgcggccgcagcggatcg 77569
to top
>gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome 13, complete sequence
          Length = 206997

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   ggagccagaggaggagggag 132
             ||||||||||||||||||||
Sbjct: 82957 ggagccagaggaggagggag 82976
to top
>gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, complete sequence
          Length = 199471

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    agctgcttctcttctctgct 322
              ||||||||||||||||||||
Sbjct: 160198 agctgcttctcttctctgct 160179
to top
>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence
          Length = 133488

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    tcttcttcctccagctctgc 83
             ||||||||||||||||||||
Sbjct: 53223 tcttcttcctccagctctgc 53242
to top
>gb|AC026412.4| Homo sapiens chromosome 5 clone CTD-2012J19, complete sequence
          Length = 128694

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   agctgcttctcttctctgct 322
             ||||||||||||||||||||
Sbjct: 95807 agctgcttctcttctctgct 95826
to top
>ref|XM_236718.3| PREDICTED: Rattus norvegicus similar to golgi autoantigen golgin
            subtype a4; tGolgin-1 (LOC501069), mRNA
          Length = 14240

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 395  cagctgctgctgctcctcgc 414
            ||||||||||||||||||||
Sbjct: 2979 cagctgctgctgctcctcgc 2960
to top
>gb|AC015448.4|AC015448 Arabidopsis thaliana chromosome I BAC T14L22 genomic sequence, complete
             sequence
          Length = 95581

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   ttcatcagcttggattgtgg 456
             ||||||||||||||||||||
Sbjct: 44485 ttcatcagcttggattgtgg 44466
to top
>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0693B08
          Length = 140812

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tccgctgatttcttcctccc 36
             ||||||||||||||||||||
Sbjct: 62394 tccgctgatttcttcctccc 62413
to top
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome
          Length = 4202352

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     cttcctccccagcaaaaggattac 51
              ||||||||||||||||| ||||||
Sbjct: 871898 cttcctccccagcaaaacgattac 871875
to top
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460C04
          Length = 189043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    cagctgctgctgctcctcgc 414
              ||||||||||||||||||||
Sbjct: 174208 cagctgctgctgctcctcgc 174189
to top
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0506B12
          Length = 170759

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   cagctgctgctgctcctcgc 414
             ||||||||||||||||||||
Sbjct: 35329 cagctgctgctgctcctcgc 35310
to top
>dbj|AP005102.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0033J14
          Length = 158233

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    cagctgctgctgctcctcgc 414
              ||||||||||||||||||||
Sbjct: 100043 cagctgctgctgctcctcgc 100024
to top
>gb|AY893913.1| Synthetic construct Homo sapiens clone FLH127879.01L retinoic acid
           receptor beta (RARB) mRNA, partial cds
          Length = 1011

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  gctctgctgtgttcccactt 96
           ||||||||||||||||||||
Sbjct: 943 gctctgctgtgttcccactt 924
to top
>gb|AY893467.1| Synthetic construct Homo sapiens clone FLH127785.01X retinoic acid
           receptor beta (RARB) mRNA, complete cds
          Length = 1011

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  gctctgctgtgttcccactt 96
           ||||||||||||||||||||
Sbjct: 943 gctctgctgtgttcccactt 924
to top
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds;
             glycyl-tRNA synthetase (Z195D10.2), ornithine
             carbamoyltransferase (Z195D10.3), putative gag protein
             (Z195D10.5), putative SET-domain transcriptional regulator
             (Z195D10.7), putative oxysterol-binding protein
             (Z195D10.8), putative polyprotein (Z195D10.9), putative
             oxysterol-binding protein (Z195D10.10), putative gag-pol
             polyprotein (Z195D10.11), putative
             phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12),
             hypothetical protein (Z195D10.15), putative gag-pol
             polyprotein (Z195D10.16), putative polyprotein
             (Z195D10.17), putative retrotransposon protein
             (Z195D10.18), and prpol (Z195D10.19) genes, complete cds;
             and putative teosinte branched2 (Z195D10.20) gene, partial
             cds
          Length = 141939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   aatggagtgaaggaaggatg 209
             ||||||||||||||||||||
Sbjct: 35232 aatggagtgaaggaaggatg 35213
to top
>gb|AY106081.1| Zea mays PCO081588 mRNA sequence
          Length = 698

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 ccgccgctcttctcctccag 391
           ||||||||||||||||||||
Sbjct: 226 ccgccgctcttctcctccag 207
to top
>gb|AF157483.1|AF157483 Homo sapiens retinoic acid receptor beta 4 (NR1B2) mRNA, complete cds
          Length = 1462

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1390 gctctgctgtgttcccactt 1371
to top
>gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23 of 83 of the
            complete sequence
          Length = 259718

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 389  cagttccagctgctgctgctcctc 412
            ||||||||| ||||||||||||||
Sbjct: 1949 cagttccaggtgctgctgctcctc 1926
to top
>gb|AC006958.1|AC006958 Homo sapiens chromosome 5q, Bac clone 32d16 (LBNL h177), complete
             sequence
          Length = 77902

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ggagccagaggaggagggag 132
             ||||||||||||||||||||
Sbjct: 13515 ggagccagaggaggagggag 13496
to top
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete
             sequence
          Length = 302538

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     tcaaaccgccccactccgct 22
             ||||||||||||||||||||
Sbjct: 36531 tcaaaccgccccactccgct 36512
to top
>gb|AE003562.3| Drosophila melanogaster chromosome 3L, section 23 of 83 of the complete
              sequence
          Length = 255329

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gcatcggctgaaacaaacaa 191
              ||||||||||||||||||||
Sbjct: 245013 gcatcggctgaaacaaacaa 244994
to top
>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete
              sequence
          Length = 212874

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    cagctgctgctgctcctcgc 414
              ||||||||||||||||||||
Sbjct: 210001 cagctgctgctgctcctcgc 210020
to top
>gb|AC004251.1|AC004251 Drosophila melanogaster (P1 DS08305 (D253)) DNA sequence, complete
             sequence
          Length = 83846

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gcatcggctgaaacaaacaa 191
             ||||||||||||||||||||
Sbjct: 51671 gcatcggctgaaacaaacaa 51690
to top
>gb|AC133511.3| Mus musculus BAC clone RP23-413E2 from 10, complete sequence
          Length = 214377

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     catcttcttcctccagctct 81
              ||||||||||||||||||||
Sbjct: 191754 catcttcttcctccagctct 191735
to top
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 225736

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   ctgcttctcttctctgctttgctt 328
             ||||| ||||||||||||||||||
Sbjct: 16238 ctgctcctcttctctgctttgctt 16215
to top
>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence
          Length = 195116

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    cagctgctgctgctcctcgc 414
              ||||||||||||||||||||
Sbjct: 124527 cagctgctgctgctcctcgc 124508
to top
>gb|AC153540.4| Mus musculus 10 BAC RP23-356N9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 198205

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     catcttcttcctccagctct 81
              ||||||||||||||||||||
Sbjct: 157993 catcttcttcctccagctct 158012
to top
>gb|M96023.1|HUMRAR28 Human retinoic acid receptor beta gene, exon E10
          Length = 1494

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 77  gctctgctgtgttcccactt 96
           ||||||||||||||||||||
Sbjct: 135 gctctgctgtgttcccactt 116
to top
>emb|X07282.1|HSRARE Human mRNA for retinoic acid receptor-epsilon protein
          Length = 1758

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1622 gctctgctgtgttcccactt 1603
to top
>emb|Y00291.1|HSHAPRA Human hap mRNA encoding a DNA-binding hormone receptor
          Length = 2972

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   gctctgctgtgttcccactt 96
            ||||||||||||||||||||
Sbjct: 1600 gctctgctgtgttcccactt 1581
to top
>dbj|D38026.1|CHKMCL Chicken mRNA for m-calpain large subunit (mCL), complete cds
          Length = 2723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 60   ctcatcttcttcctccagct 79
            ||||||||||||||||||||
Sbjct: 1188 ctcatcttcttcctccagct 1169
to top
>emb|AL607073.15| Mouse DNA sequence from clone RP23-321K1 on chromosome 4, complete
             sequence
          Length = 95219

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   tctctgctttgcttgcctcc 334
             ||||||||||||||||||||
Sbjct: 48725 tctctgctttgcttgcctcc 48706


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,414,268
Number of Sequences: 3902068
Number of extensions: 6414268
Number of successful extensions: 163696
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162855
Number of HSP's gapped (non-prelim): 841
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top