ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl53a02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 240 3e-60
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 240 3e-60
3dbj|AK099789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
4gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 46 0.089
5gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 46 0.089
6emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.089
7dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.089
8dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.35
9gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
10ref|NM_032129.1| Homo sapiens pleckstrin homology domain contain... 42 1.4
11emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 42 1.4
12gb|U41559.2| Caenorhabditis elegans cosmid C26B2, complete sequence 42 1.4
13gb|BC101386.1| Homo sapiens pleckstrin homology domain containin... 42 1.4
14gb|BC101387.1| Homo sapiens pleckstrin homology domain containin... 42 1.4
15emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chro... 42 1.4
16emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 42 1.4
17emb|AL136730.1|HSM801698 Homo sapiens mRNA; cDNA DKFZp434H2010 (... 42 1.4
18gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.4
19dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.4
20dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21gb|AC009154.5| Homo sapiens chromosome 16 clone RP11-58A18, comp... 42 1.4
22gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.4
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
24gb|AY780633.1| Xanthomonas axonopodis pv. glycines strain 8ra pl... 40 5.5
25ref|XM_469837.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
26ref|XM_465304.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
27ref|NM_195606.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.5
28ref|XM_468693.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
29gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.5
30gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 5.5
31ref|XM_360656.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.5
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
33gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 40 5.5
34gb|AY526909.1| Bordetella phage BIP-1, complete genome 40 5.5
35gb|AY526908.1| Bordetella phage BMP-1, complete genome 40 5.5
36gb|AY029185.2| Bordetella phage BPP-1, complete genome 40 5.5
37gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 40 5.5
38ref|XM_751528.1| Ustilago maydis 521 hypothetical protein (UM004... 40 5.5
39emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chr... 40 5.5
40gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 40 5.5
41gb|AC005014.2| Homo sapiens BAC clone GS1-166A23 from 7, complet... 40 5.5
42emb|X61379.1|PLHSP70A P.lividus hsp70-IV gene for heat shock pro... 40 5.5
43gb|AY328910.1| Oryza sativa (indica cultivar-group) BRITTLE CULM... 40 5.5
44gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CU... 40 5.5
45gb|AC027682.10| Homo sapiens chromosome 16 clone CTD-2012K14, co... 40 5.5
46gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.5
47emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on ch... 40 5.5
48emb|BX284747.1|NCB9B11 Neurospora crassa DNA linkage group II BA... 40 5.5
49emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 5.5
50dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 5.5
51gb|AC018757.6| Homo sapiens chromosome 5 clone CTB-45J8, complet... 40 5.5
52gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nippon... 40 5.5
53gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.5
54gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.5
55dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
56dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
58gb|AC008625.5|AC008625 Homo sapiens chromosome 5 clone CTB-157D1... 40 5.5
59emb|BX324171.9| Zebrafish DNA sequence from clone DKEYP-57C9 in ... 40 5.5
60gb|AC008675.5|AC008675 Homo sapiens chromosome 5 clone CTB-45I8,... 40 5.5
61gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.5
62gb|AF427793.1| Nannocystis exedends retron-Ne144, complete sequence 40 5.5
63gb|AE005078.1| Halobacterium sp. NRC-1 section 109 of 170 of the... 40 5.5
64dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
65dbj|AK105862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
66ref|NM_210991.1| Eremothecium gossypii AFR090Wp (AFR090W), mRNA 40 5.5
67dbj|AK069631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
68dbj|AK067626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
69gb|AY105991.1| Zea mays PCO082605 mRNA sequence 40 5.5
70gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.5
71gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5 
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
             complete sequence
          Length = 164898

 Score =  240 bits (121), Expect = 3e-60
 Identities = 279/331 (84%), Gaps = 3/331 (0%)
 Strand = Plus / Minus

                                                                         
Query: 72    tgacgctcgctggcaagggcgccgtgctcacccccgccgccgtctacgcgctctccgtcg 131
             ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||  ||
Sbjct: 66093 tgacgctcggtggcaagggcgccgcgctcacccccgccgccgtctacgccctctcccacg 66034

                                                                         
Query: 132   gcctcgccggccccgtcatcgacgcctccgcgctccagcggctctccaaccgcgccccct 191
             ||||||||| ||||| ||||||| | |||||||||||| |||||||||  |||| |||||
Sbjct: 66033 gcctcgccgaccccgccatcgacccatccgcgctccagaggctctccacgcgcggcccct 65974

                                                                         
Query: 192   ccccgcaggagacccctgggtcgctccgggacctggatttggcgacgcacgagtcccgcg 251
             | |||||||| ||||| | ||||||||| | ||| |  ||| || |||  ||||| ||||
Sbjct: 65973 cgccgcaggacacccccgcgtcgctccgcggcctcgccttgtcgccgccggagtcacgcg 65914

                                                                         
Query: 252   cggccgcggcggtgcttctcaacaagctcctcctcacagcgaacgattcctcctccgccc 311
             | |||||||||||||| ||||||||||||||  |||| |||   ||   |||||| ||||
Sbjct: 65913 ccgccgcggcggtgctgctcaacaagctcctggtcaccgcggggga---ctcctctgccc 65857

                                                                         
Query: 312   tcgtcaccgtcgccacggccaacgccctcgccgggtcgctcgagctcgccgcggcgctgc 371
             |||| |||| ||| ||||||| || |||||| ||||||||||| |||||||| |||||||
Sbjct: 65856 tcgtgaccgccgcgacggccaccggcctcgctgggtcgctcgacctcgccgccgcgctgc 65797

                                            
Query: 372   cactcgccacccgcgacgaggccgccgtcgc 402
             | |  ||| |||||||||||||||| |||||
Sbjct: 65796 ccccggcctcccgcgacgaggccgcagtcgc 65766
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  240 bits (121), Expect = 3e-60
 Identities = 279/331 (84%), Gaps = 3/331 (0%)
 Strand = Plus / Minus

                                                                           
Query: 72      tgacgctcgctggcaagggcgccgtgctcacccccgccgccgtctacgcgctctccgtcg 131
               ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||  ||
Sbjct: 2871482 tgacgctcggtggcaagggcgccgcgctcacccccgccgccgtctacgccctctcccacg 2871423

                                                                           
Query: 132     gcctcgccggccccgtcatcgacgcctccgcgctccagcggctctccaaccgcgccccct 191
               ||||||||| ||||| ||||||| | |||||||||||| |||||||||  |||| |||||
Sbjct: 2871422 gcctcgccgaccccgccatcgacccatccgcgctccagaggctctccacgcgcggcccct 2871363

                                                                           
Query: 192     ccccgcaggagacccctgggtcgctccgggacctggatttggcgacgcacgagtcccgcg 251
               | |||||||| ||||| | ||||||||| | ||| |  ||| || |||  ||||| ||||
Sbjct: 2871362 cgccgcaggacacccccgcgtcgctccgcggcctcgccttgtcgccgccggagtcacgcg 2871303

                                                                           
Query: 252     cggccgcggcggtgcttctcaacaagctcctcctcacagcgaacgattcctcctccgccc 311
               | |||||||||||||| ||||||||||||||  |||| |||   ||   |||||| ||||
Sbjct: 2871302 ccgccgcggcggtgctgctcaacaagctcctggtcaccgcggggga---ctcctctgccc 2871246

                                                                           
Query: 312     tcgtcaccgtcgccacggccaacgccctcgccgggtcgctcgagctcgccgcggcgctgc 371
               |||| |||| ||| ||||||| || |||||| ||||||||||| |||||||| |||||||
Sbjct: 2871245 tcgtgaccgccgcgacggccaccggcctcgctgggtcgctcgacctcgccgccgcgctgc 2871186

                                              
Query: 372     cactcgccacccgcgacgaggccgccgtcgc 402
               | |  ||| |||||||||||||||| |||||
Sbjct: 2871185 ccccggcctcccgcgacgaggccgcagtcgc 2871155
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>dbj|AK099789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097A18, full
           insert sequence
          Length = 2644

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 72  tgacgctcgctggcaagggcgccgtgctcacccccgccgccgtctacgcgctctccgtcg 131
           ||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||  ||
Sbjct: 106 tgacgctcggtggcaagggcgccgcgctcacccccgccgccgtctacgccctctcccacg 165

                          
Query: 132 gcctcgccggccccg 146
           ||||||||| |||||
Sbjct: 166 gcctcgccgaccccg 180
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 352     cgagctcgccgcggcgctgccactcgc 378
               ||||| |||||||||||||||||||||
Sbjct: 2359025 cgagcgcgccgcggcgctgccactcgc 2358999
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 352     cgagctcgccgcggcgctgccactcgc 378
               ||||| |||||||||||||||||||||
Sbjct: 1137424 cgagcgcgccgcggcgctgccactcgc 1137450
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 352     cgagctcgccgcggcgctgccactcgc 378
               ||||| |||||||||||||||||||||
Sbjct: 1018384 cgagcgcgccgcggcgctgccactcgc 1018410
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 320     gtcgccacggccaacgccctcgccggg 346
               ||||||||||||| |||||||||||||
Sbjct: 7987270 gtcgccacggccaccgccctcgccggg 7987296



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 348     cgctcgagctcgccgcggcgctgc 371
               |||| |||||||||||||||||||
Sbjct: 1109314 cgctggagctcgccgcggcgctgc 1109337
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 316     caccgtcgccacggccaacgcc 337
               ||||||||||||||||||||||
Sbjct: 5898350 caccgtcgccacggccaacgcc 5898371



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 389     gaggccgccgtcgccgcggc 408
               ||||||||||||||||||||
Sbjct: 5921130 gaggccgccgtcgccgcggc 5921149



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 385     cgacgaggccgccgtcgccgcggc 408
               |||||| |||||||||||||||||
Sbjct: 3614351 cgacgaagccgccgtcgccgcggc 3614328
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>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032N11 map near 50283S, complete sequence
          Length = 139217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 308   gccctcgtcaccgtcgccacg 328
             |||||||||||||||||||||
Sbjct: 96720 gccctcgtcaccgtcgccacg 96740
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>ref|NM_032129.1| Homo sapiens pleckstrin homology domain containing, family N member
           1 (PLEKHN1), mRNA
          Length = 2418

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 359 gccgcggcgctgccactcgccaccc 383
           ||||||||||||||||||| |||||
Sbjct: 617 gccgcggcgctgccactcggcaccc 641
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>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    cgaggccgccgtcgccgcggc 408
              |||||||||||||||||||||
Sbjct: 212074 cgaggccgccgtcgccgcggc 212054
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>gb|U41559.2| Caenorhabditis elegans cosmid C26B2, complete sequence
          Length = 41511

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     ttttttccctctttttctcta 21
             |||||||||||||||||||||
Sbjct: 31894 ttttttccctctttttctcta 31874
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>gb|BC101386.1| Homo sapiens pleckstrin homology domain containing, family N member
           1, mRNA (cDNA clone MGC:120613 IMAGE:40026400), complete
           cds
          Length = 2195

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 359 gccgcggcgctgccactcgccaccc 383
           ||||||||||||||||||| |||||
Sbjct: 612 gccgcggcgctgccactcggcaccc 636
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>gb|BC101387.1| Homo sapiens pleckstrin homology domain containing, family N member
           1, mRNA (cDNA clone MGC:120616 IMAGE:40026404), complete
           cds
          Length = 2456

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 359 gccgcggcgctgccactcgccaccc 383
           ||||||||||||||||||| |||||
Sbjct: 732 gccgcggcgctgccactcggcaccc 756
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>emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chromosome 1 Contains three
             novel genes, a novel gene (MGC45873), a novel gene
             (DKFZP564C186), a novel gene, a novel gene
             (DKFZP434H2010), a novel gene (MGC13275), the gene for
             bHLH factor Hes4 (Hes4), a ribosomal protein L39 (RPL39)
             pseudogene, a novel gene, the G1P2 gene for interferon
             alpha-inducible protein (clone IFI-15K), the AGRN gene for
             agrin, two novel genes and fifteen CpG islands, complete
             sequence
          Length = 186759

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 359   gccgcggcgctgccactcgccaccc 383
             ||||||||||||||||||| |||||
Sbjct: 94826 gccgcggcgctgccactcggcaccc 94850
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    cgaggccgccgtcgccgcggc 408
              |||||||||||||||||||||
Sbjct: 141334 cgaggccgccgtcgccgcggc 141314



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 381    cccgcgacgaggccgccgtcgccg 404
              |||||| |||||||||||||||||
Sbjct: 226162 cccgcgtcgaggccgccgtcgccg 226185
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>emb|AL136730.1|HSM801698 Homo sapiens mRNA; cDNA DKFZp434H2010 (from clone DKFZp434H2010)
          Length = 2418

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 359 gccgcggcgctgccactcgccaccc 383
           ||||||||||||||||||| |||||
Sbjct: 617 gccgcggcgctgccactcggcaccc 641
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 388     cgaggccgccgtcgccgcggc 408
               |||||||||||||||||||||
Sbjct: 1001180 cgaggccgccgtcgccgcggc 1001160
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    cgaggccgccgtcgccgcggc 408
              |||||||||||||||||||||
Sbjct: 724653 cgaggccgccgtcgccgcggc 724633
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 308      gccctcgtcaccgtcgccacg 328
                |||||||||||||||||||||
Sbjct: 14481886 gccctcgtcaccgtcgccacg 14481906
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>gb|AC009154.5| Homo sapiens chromosome 16 clone RP11-58A18, complete sequence
          Length = 181914

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   ccccgcaggagacccctgggt 212
             |||||||||||||||||||||
Sbjct: 29607 ccccgcaggagacccctgggt 29627
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    cgccgcggcgctgccactcgc 378
              |||||||||||||||||||||
Sbjct: 852097 cgccgcggcgctgccactcgc 852117
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 308      gccctcgtcaccgtcgccacg 328
                |||||||||||||||||||||
Sbjct: 14563887 gccctcgtcaccgtcgccacg 14563907
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>gb|AY780633.1| Xanthomonas axonopodis pv. glycines strain 8ra plasmid pXAG82,
           complete sequence
          Length = 1315

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 cgccgcggcgctgccactcg 377
           ||||||||||||||||||||
Sbjct: 615 cgccgcggcgctgccactcg 596
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>ref|XM_469837.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2349

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 114 tctacgcgctctccgtcggcctcgccgg 141
           |||||||||||||| |||||| ||||||
Sbjct: 440 tctacgcgctctccatcggccgcgccgg 467
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>ref|XM_465304.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 432

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 gggtcgctcgagctcgccgc 363
           ||||||||||||||||||||
Sbjct: 78  gggtcgctcgagctcgccgc 59
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>ref|NM_195606.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBb0036B06.6), mRNA
          Length = 2994

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  gccacccgcgacgaggccgc 396
            ||||||||||||||||||||
Sbjct: 1666 gccacccgcgacgaggccgc 1685
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>ref|XM_468693.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 tctccgtcggcctcgccggc 142
           ||||||||||||||||||||
Sbjct: 540 tctccgtcggcctcgccggc 559
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 385     cgacgaggccgccgtcgccgcggc 408
               ||||||||||| ||||||||||||
Sbjct: 1546420 cgacgaggccgtcgtcgccgcggc 1546443
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 340     cgccgggtcgctcgagctcgccgcggcg 367
               |||||| ||||||||| |||||||||||
Sbjct: 2427730 cgccggctcgctcgagttcgccgcggcg 2427703
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>ref|XM_360656.1| Magnaporthe grisea 70-15 hypothetical protein (MG03199.4) partial
           mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 389 gaggccgccgtcgccgcggc 408
           ||||||||||||||||||||
Sbjct: 198 gaggccgccgtcgccgcggc 217
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 114      tctacgcgctctccgtcggcctcgccgg 141
                |||||||||||||| |||||| ||||||
Sbjct: 31041559 tctacgcgctctccatcggccgcgccgg 31041586



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 123      tctccgtcggcctcgccggc 142
                ||||||||||||||||||||
Sbjct: 17073285 tctccgtcggcctcgccggc 17073304
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>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster,
             complete sequence
          Length = 135638

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    tgctcacccccgccgccgtc 115
             ||||||||||||||||||||
Sbjct: 19703 tgctcacccccgccgccgtc 19684
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>gb|AY526909.1| Bordetella phage BIP-1, complete genome
          Length = 42638

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  acgaggccgccgtcgccgcg 406
            ||||||||||||||||||||
Sbjct: 4909 acgaggccgccgtcgccgcg 4890
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>gb|AY526908.1| Bordetella phage BMP-1, complete genome
          Length = 42663

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  acgaggccgccgtcgccgcg 406
            ||||||||||||||||||||
Sbjct: 4909 acgaggccgccgtcgccgcg 4890
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>gb|AY029185.2| Bordetella phage BPP-1, complete genome
          Length = 42493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 387  acgaggccgccgtcgccgcg 406
            ||||||||||||||||||||
Sbjct: 4909 acgaggccgccgtcgccgcg 4890
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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    tctccgtcggcctcgccggc 142
              ||||||||||||||||||||
Sbjct: 104031 tctccgtcggcctcgccggc 104050
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>ref|XM_751528.1| Ustilago maydis 521 hypothetical protein (UM00474.1) partial mRNA
          Length = 2421

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  cgccgccgtctacgcgctct 125
            ||||||||||||||||||||
Sbjct: 1812 cgccgccgtctacgcgctct 1831
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>emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chromosome 9 Contains the
             5' end of the PTGS1 gene for prostaglandin-endoperoxide
             synthase 1 (prostaglandin G/H synthase and
             cyclooxygenase), the gene for mitochondrial ribosome
             recycling factor (MRRF) (RRF MRFF MTRRF), a novel gene
             (MGC2734), the LHX6 gene for LIM-homeobox protein 6, the
             3' end of a novel gene (LOC254956) and five CpG islands,
             complete sequence
          Length = 223020

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   ccgcgccccctccccgcagg 200
             ||||||||||||||||||||
Sbjct: 48791 ccgcgccccctccccgcagg 48810
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>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01
             genomic sequence, complete sequence
          Length = 168759

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 114   tctacgcgctctccgtcggcctcgccgg 141
             |||||||||||||| |||||| ||||||
Sbjct: 54505 tctacgcgctctccatcggccgcgccgg 54478
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>gb|AC005014.2| Homo sapiens BAC clone GS1-166A23 from 7, complete sequence
          Length = 168247

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ttttttccctctttttctct 20
             ||||||||||||||||||||
Sbjct: 13984 ttttttccctctttttctct 13965
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>emb|X61379.1|PLHSP70A P.lividus hsp70-IV gene for heat shock protein 70 kDa
          Length = 5327

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    ttttttccctctttttctct 20
            ||||||||||||||||||||
Sbjct: 2207 ttttttccctctttttctct 2226
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>gb|AY328910.1| Oryza sativa (indica cultivar-group) BRITTLE CULM1 (BC1) gene,
            complete cds
          Length = 2547

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 123  tctccgtcggcctcgccggc 142
            ||||||||||||||||||||
Sbjct: 1272 tctccgtcggcctcgccggc 1291
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>gb|AY328909.1| Oryza sativa (japonica cultivar-group) BRITTLE CULM1 (BC1) gene,
            complete cds
          Length = 4498

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 123  tctccgtcggcctcgccggc 142
            ||||||||||||||||||||
Sbjct: 2856 tctccgtcggcctcgccggc 2875
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>gb|AC027682.10| Homo sapiens chromosome 16 clone CTD-2012K14, complete sequence
          Length = 162991

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 334    cgccctcgccgggtcgctcg 353
              ||||||||||||||||||||
Sbjct: 153753 cgccctcgccgggtcgctcg 153734
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 335     gccctcgccgggtcgctcgagctcgccg 362
               |||| ||||||||||||||| |||||||
Sbjct: 2503182 gcccgcgccgggtcgctcgacctcgccg 2503209
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>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the
             5' end of the ENG gene for endoglin (Osler-Rendu-Weber
             syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene
             for adenylate kinase 1, the ST6GALNAC6 gene for
             CMP-NeuAC:(beta)-N-acetylgalactosaminide
             (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the
             SIAT7D gene for sialyltransferase 7D
             ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,
             3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase)
             (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for
             dolichyl-phosphate mannosyltransferase polypeptide 2,
             regulatory subunit (MGC21559), the gene for a novel
             protien containing FLJ00179, a novel gene and ten CpG
             islands, complete sequence
          Length = 164201

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 173   ctctccaaccgcgccccctccccg 196
             |||||||||| |||||||||||||
Sbjct: 70814 ctctccaaccccgccccctccccg 70837
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>emb|BX284747.1|NCB9B11 Neurospora crassa DNA linkage group II BAC clone B9B11
          Length = 103284

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ttttttccctctttttctct 20
             ||||||||||||||||||||
Sbjct: 89633 ttttttccctctttttctct 89652
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   cacccgcgacgaggccgccg 398
             ||||||||||||||||||||
Sbjct: 13030 cacccgcgacgaggccgccg 13049
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 1       ttttttccctctttttctct 20
               ||||||||||||||||||||
Sbjct: 1709479 ttttttccctctttttctct 1709460
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>gb|AC018757.6| Homo sapiens chromosome 5 clone CTB-45J8, complete sequence
          Length = 186418

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      ttttttccctctttttctct 20
              ||||||||||||||||||||
Sbjct: 114665 ttttttccctctttttctct 114684
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>gb|AC051624.6|AC051624 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0036B06, from Chromosome 10, complete sequence
          Length = 148263

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   gccacccgcgacgaggccgc 396
             ||||||||||||||||||||
Sbjct: 54203 gccacccgcgacgaggccgc 54184
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>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    ccgcggcggtgcttctcaac 274
              ||||||||||||||||||||
Sbjct: 594153 ccgcggcggtgcttctcaac 594134
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 348     cgctcgagctcgccgcggcgctgc 371
               ||||||| ||||||||||||||||
Sbjct: 3423481 cgctcgaactcgccgcggcgctgc 3423458



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 348     cgctcgagctcgccgcggcgctgc 371
               |||||||| |||||||||||||||
Sbjct: 3175016 cgctcgaggtcgccgcggcgctgc 3174993



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 382    ccgcgacgaggccgccgtcgccgc 405
              ||||||||||| ||||||||||||
Sbjct: 549812 ccgcgacgaggtcgccgtcgccgc 549789
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 377     gccacccgcgacgaggccgc 396
               ||||||||||||||||||||
Sbjct: 7917055 gccacccgcgacgaggccgc 7917074
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 114      tctacgcgctctccgtcggcctcgccgg 141
                |||||||||||||| |||||| ||||||
Sbjct: 31132082 tctacgcgctctccatcggccgcgccgg 31132109



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 123      tctccgtcggcctcgccggc 142
                ||||||||||||||||||||
Sbjct: 17066854 tctccgtcggcctcgccggc 17066873
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 344      gggtcgctcgagctcgccgc 363
                ||||||||||||||||||||
Sbjct: 13255894 gggtcgctcgagctcgccgc 13255875
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>gb|AC008625.5|AC008625 Homo sapiens chromosome 5 clone CTB-157D17, complete sequence
          Length = 137592

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ttttttccctctttttctct 20
              ||||||||||||||||||||
Sbjct: 118629 ttttttccctctttttctct 118610
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>emb|BX324171.9| Zebrafish DNA sequence from clone DKEYP-57C9 in linkage group 5,
             complete sequence
          Length = 151068

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     ttttttccctctttttctctaggg 24
             |||||||||||||||| |||||||
Sbjct: 14629 ttttttccctctttttttctaggg 14652
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>gb|AC008675.5|AC008675 Homo sapiens chromosome 5 clone CTB-45I8, complete sequence
          Length = 186415

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ttttttccctctttttctct 20
             ||||||||||||||||||||
Sbjct: 71754 ttttttccctctttttctct 71735
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 306     ccgccctcgtcaccgtcgcc 325
               ||||||||||||||||||||
Sbjct: 3519230 ccgccctcgtcaccgtcgcc 3519211



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    cgcgcggccgcggcggtgct 267
              ||||||||||||||||||||
Sbjct: 576602 cgcgcggccgcggcggtgct 576583
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>gb|AF427793.1| Nannocystis exedends retron-Ne144, complete sequence
          Length = 3243

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 348  cgctcgagctcgccgcggcg 367
            ||||||||||||||||||||
Sbjct: 1499 cgctcgagctcgccgcggcg 1480
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>gb|AE005078.1| Halobacterium sp. NRC-1 section 109 of 170 of the complete genome
          Length = 11449

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 129   tcggcctcgccggccccgtcatcgacgc 156
             ||||| |||||||||||||||| |||||
Sbjct: 10837 tcggcgtcgccggccccgtcatggacgc 10810
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>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0622F08
          Length = 140628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gggtcgctcgagctcgccgc 363
             ||||||||||||||||||||
Sbjct: 63821 gggtcgctcgagctcgccgc 63802
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>dbj|AK105862.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A03, full
           insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 tctccgtcggcctcgccggc 142
           ||||||||||||||||||||
Sbjct: 504 tctccgtcggcctcgccggc 523
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>ref|NM_210991.1| Eremothecium gossypii AFR090Wp (AFR090W), mRNA
          Length = 654

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 ccgcggcggtgcttctcaac 274
           ||||||||||||||||||||
Sbjct: 634 ccgcggcggtgcttctcaac 615
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>dbj|AK069631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025J18, full
           insert sequence
          Length = 1836

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 tctccgtcggcctcgccggc 142
           ||||||||||||||||||||
Sbjct: 540 tctccgtcggcctcgccggc 559
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>dbj|AK067626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I06, full
           insert sequence
          Length = 2325

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 114 tctacgcgctctccgtcggcctcgccgg 141
           |||||||||||||| |||||| ||||||
Sbjct: 356 tctacgcgctctccatcggccgcgccgg 383
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>gb|AY105991.1| Zea mays PCO082605 mRNA sequence
          Length = 487

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                       
Query: 359 gccgcggcgctgccactcgccacccgcg 386
           ||||||||||||||||| ||||||||||
Sbjct: 338 gccgcggcgctgccact-gccacccgcg 312
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 351     tcgagctcgccgcggcgctg 370
               ||||||||||||||||||||
Sbjct: 3198824 tcgagctcgccgcggcgctg 3198843
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 377     gccacccgcgacgaggccgc 396
               ||||||||||||||||||||
Sbjct: 7922154 gccacccgcgacgaggccgc 7922173


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,903,605
Number of Sequences: 3902068
Number of extensions: 2903605
Number of successful extensions: 104045
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 99087
Number of HSP's gapped (non-prelim): 4957
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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