>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 28      cgtgccgcgccgccaccctgc 48
               |||||||||||||||||||||
Sbjct: 2265426 cgtgccgcgccgccaccctgc 2265446

>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence
          Length = 225868

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 143   ccagagggtcagaagcagcaagagg 167
             ||||||| |||||||||||||||||
Sbjct: 16690 ccagaggctcagaagcagcaagagg 16714

>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence
          Length = 179685

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 143    ccagagggtcagaagcagcaagagg 167
              ||||||| |||||||||||||||||
Sbjct: 148257 ccagaggctcagaagcagcaagagg 148233

>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 28     cgtgccgcgccgccaccctgc 48
              |||||||||||||||||||||
Sbjct: 189390 cgtgccgcgccgccaccctgc 189410

>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             8/14
          Length = 306050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    cgtgccgcgccgccaccctgc 48
             |||||||||||||||||||||
Sbjct: 42009 cgtgccgcgccgccaccctgc 42029

>gb|AC140288.5| Mus musculus BAC clone RP23-348K1 from 14, complete sequence
          Length = 250519

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 143   ccagagggtcagaagcagcaagagg 167
             ||||||| |||||||||||||||||
Sbjct: 49071 ccagaggctcagaagcagcaagagg 49047

>ref|XM_469889.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1415

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  gccgcgccgccaccctgccc 50
           ||||||||||||||||||||
Sbjct: 191 gccgcgccgccaccctgccc 172

>ref|XM_470744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 27 ccgtgccgcgccgccaccct 46
          ||||||||||||||||||||
Sbjct: 63 ccgtgccgcgccgccaccct 44

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 31       gccgcgccgccaccctgccc 50
                ||||||||||||||||||||
Sbjct: 31359662 gccgcgccgccaccctgccc 31359681



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 27       ccgtgccgcgccgccaccct 46
                ||||||||||||||||||||
Sbjct: 14866902 ccgtgccgcgccgccaccct 14866921

>emb|BX037208.1|CNS090VG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA9CC10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 796

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 tgtagttagaagcagcagca 277
           ||||||||||||||||||||
Sbjct: 745 tgtagttagaagcagcagca 764

>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete
              sequence
          Length = 159091

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gccgcgccgccaccctgccc 50
              ||||||||||||||||||||
Sbjct: 136138 gccgcgccgccaccctgccc 136119

>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    cgcgccgccaccctgcccaa 52
             ||||||||||||||||||||
Sbjct: 25033 cgcgccgccaccctgcccaa 25014

>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete
             sequence
          Length = 148021

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ccgtgccgcgccgccaccct 46
             ||||||||||||||||||||
Sbjct: 65866 ccgtgccgcgccgccaccct 65847

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 31       gccgcgccgccaccctgccc 50
                ||||||||||||||||||||
Sbjct: 31450178 gccgcgccgccaccctgccc 31450197



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 27       ccgtgccgcgccgccaccct 46
                ||||||||||||||||||||
Sbjct: 14861436 ccgtgccgcgccgccaccct 14861455

>dbj|AK063380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F11, full
           insert sequence
          Length = 1626

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  gccgcgccgccaccctgccc 50
           ||||||||||||||||||||
Sbjct: 373 gccgcgccgccaccctgccc 354

>emb|AL732448.6| Mouse DNA sequence from clone RP23-116F12 on chromosome 2, complete
             sequence
          Length = 214210

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   agggtcagaagcagcaagagggga 170
             |||||||| |||||||||||||||
Sbjct: 38319 agggtcagcagcagcaagagggga 38342


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,259,539
Number of Sequences: 3902068
Number of extensions: 2259539
Number of successful extensions: 45515
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45394
Number of HSP's gapped (non-prelim): 121
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)