Clone Name | bastl50h05 |
---|---|
Clone Library Name | barley_pub |
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 81.3 bits (199), Expect = 7e-16 Identities = 40/40 (100%), Positives = 40/40 (100%) Frame = +2 Query: 86 AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG Sbjct: 41 AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 80
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 66.6 bits (161), Expect = 2e-11 Identities = 32/36 (88%), Positives = 34/36 (94%) Frame = +2 Query: 98 EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLG Sbjct: 42 EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLG 77
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 63.9 bits (154), Expect = 1e-10 Identities = 31/36 (86%), Positives = 33/36 (91%) Frame = +2 Query: 98 EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 EIDEDLHSRQLAVYGRETM+ LF S+VLVSGL GLG Sbjct: 42 EIDEDLHSRQLAVYGRETMKPLFGSNVLVSGLQGLG 77
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 50.4 bits (119), Expect = 1e-06 Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 8/58 (13%) Frame = +2 Query: 56 ESVLPTGP----NGAAPQ----EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 +SVLP P NG A +IDE L+SRQL V G E M+RL S VLVSGL GLG Sbjct: 27 QSVLPQVPSAPTNGMAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLG 84
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 48.1 bits (113), Expect = 6e-06 Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 5/54 (9%) Frame = +2 Query: 59 SVLPTGP-NGAAPQ----EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 S +P+ P NG A +IDE L+SRQL V G E M+RL S VLVSGL GLG Sbjct: 31 SEVPSVPTNGMAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLG 84
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 45.8 bits (107), Expect = 3e-05 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 4/53 (7%) Frame = +2 Query: 59 SVLPTGPNGAAPQ----EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 S +PT NG A +IDE L+SRQL V G E M+ L S VLVSGL GLG Sbjct: 34 SSVPT--NGMAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLG 84
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 44.7 bits (104), Expect = 7e-05 Identities = 22/40 (55%), Positives = 29/40 (72%) Frame = +2 Query: 86 AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 +A EIDE L+SRQL V G+E M ++ S+VL+ GL GLG Sbjct: 9 SAAGEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLG 48
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 41.6 bits (96), Expect = 6e-04 Identities = 21/39 (53%), Positives = 28/39 (71%) Frame = +2 Query: 89 APQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 A + +DE+L+SRQL V G M+R+ + VLVSGL GLG Sbjct: 6 ASKLLDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLG 44
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 40.0 bits (92), Expect = 0.002 Identities = 19/35 (54%), Positives = 25/35 (71%) Frame = +2 Query: 101 IDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 IDE L+SRQL V G E M+++ S+VL+ G GLG Sbjct: 15 IDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLG 49
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 34.7 bits (78), Expect = 0.070 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +2 Query: 74 GPNGAAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 G G E + + RQ+ ++G E +RL AS VL+ G+ GLG Sbjct: 9 GGGGGGISEEEAAQYDRQIRLWGLEAQKRLRASRVLIVGMKGLG 52
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 33.1 bits (74), Expect = 0.20 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 83 GAAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 G E + + RQ+ ++G E +RL AS VL+ GL GLG Sbjct: 8 GGGISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLG 48
>HESA1_ANAVT (P46049) Protein hesA, heterocyst| Length = 267 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 Query: 92 PQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205 P E++ L +G +RL ++ VLV+G+ GLG Sbjct: 6 PTELERYSRQMMLPNFGEAAQKRLKSATVLVTGVGGLG 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,773,294 Number of Sequences: 219361 Number of extensions: 256700 Number of successful extensions: 1168 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1158 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1167 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)