ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3 81 7e-16
2UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1 67 2e-11
3UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 64 1e-10
4UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1 50 1e-06
5UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein) 48 6e-06
6UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1 46 3e-05
7UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1 45 7e-05
8UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8) 42 6e-04
9UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ R... 40 0.002
10ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUM... 35 0.070
11ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUM... 33 0.20
12HESA1_ANAVT (P46049) Protein hesA, heterocyst 28 5.0

>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score = 81.3 bits (199), Expect = 7e-16
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +2

Query: 86  AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG
Sbjct: 41  AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 80



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>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 32/36 (88%), Positives = 34/36 (94%)
 Frame = +2

Query: 98  EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           EIDEDLHSRQLAVYGRETM+RLF S+VLVSGL GLG
Sbjct: 42  EIDEDLHSRQLAVYGRETMKRLFGSNVLVSGLQGLG 77



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>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 31/36 (86%), Positives = 33/36 (91%)
 Frame = +2

Query: 98  EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           EIDEDLHSRQLAVYGRETM+ LF S+VLVSGL GLG
Sbjct: 42  EIDEDLHSRQLAVYGRETMKPLFGSNVLVSGLQGLG 77



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>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1|
          Length = 1058

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 32/58 (55%), Positives = 36/58 (62%), Gaps = 8/58 (13%)
 Frame = +2

Query: 56  ESVLPTGP----NGAAPQ----EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           +SVLP  P    NG A      +IDE L+SRQL V G E M+RL  S VLVSGL GLG
Sbjct: 27  QSVLPQVPSAPTNGMAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLG 84



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>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)|
          Length = 1058

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 30/54 (55%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
 Frame = +2

Query: 59  SVLPTGP-NGAAPQ----EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           S +P+ P NG A      +IDE L+SRQL V G E M+RL  S VLVSGL GLG
Sbjct: 31  SEVPSVPTNGMAKNGSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLG 84



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>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1|
          Length = 1058

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
 Frame = +2

Query: 59  SVLPTGPNGAAPQ----EIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           S +PT  NG A      +IDE L+SRQL V G E M+ L  S VLVSGL GLG
Sbjct: 34  SSVPT--NGMAKNGSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLG 84



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>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1|
          Length = 1024

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = +2

Query: 86  AAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           +A  EIDE L+SRQL V G+E M ++  S+VL+ GL GLG
Sbjct: 9   SAAGEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLG 48



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>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +2

Query: 89  APQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           A + +DE+L+SRQL V G   M+R+  + VLVSGL GLG
Sbjct: 6   ASKLLDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLG 44



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>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport|
           protein 3)
          Length = 1012

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +2

Query: 101 IDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           IDE L+SRQL V G E M+++  S+VL+ G  GLG
Sbjct: 15  IDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLG 49



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>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 350

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 74  GPNGAAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           G  G    E +   + RQ+ ++G E  +RL AS VL+ G+ GLG
Sbjct: 9   GGGGGGISEEEAAQYDRQIRLWGLEAQKRLRASRVLIVGMKGLG 52



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>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 346

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +2

Query: 83  GAAPQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           G    E +   + RQ+ ++G E  +RL AS VL+ GL GLG
Sbjct: 8   GGGISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLG 48



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>HESA1_ANAVT (P46049) Protein hesA, heterocyst|
          Length = 267

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 92  PQEIDEDLHSRQLAVYGRETMRRLFASDVLVSGLNGLG 205
           P E++       L  +G    +RL ++ VLV+G+ GLG
Sbjct: 6   PTELERYSRQMMLPNFGEAAQKRLKSATVLVTGVGGLG 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,773,294
Number of Sequences: 219361
Number of extensions: 256700
Number of successful extensions: 1168
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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