ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, ... 220 1e-54
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 147 2e-32
3gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 147 2e-32
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 147 2e-32
5dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 2e-32
6ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA 143 2e-31
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 143 2e-31
8dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 2e-31
9dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 143 2e-31
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 115 6e-23
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 115 6e-23
12emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 115 6e-23
13emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 115 6e-23
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 107 1e-20
15dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 1e-20
16gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 107 1e-20
17emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 107 1e-20
18gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (U... 90 3e-15
19gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, ... 66 5e-08
20gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 44 0.17
21ref|XM_465038.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.66
22emb|AL138828.15| Human DNA sequence from clone RP11-472E5 on chr... 42 0.66
23gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 42 0.66
24gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, comple... 42 0.66
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.66
26gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 0.66
27dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.66
28dbj|AK101883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.66
29ref|XM_468431.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.6
30ref|XM_756491.1| Ustilago maydis 521 hypothetical protein (UM054... 40 2.6
31ref|XM_860007.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
32ref|XM_859991.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
33ref|XM_859971.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
34ref|XM_859953.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
35ref|XM_859934.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
36ref|XM_859917.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
37ref|XM_859897.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
38ref|XM_859881.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
39ref|XM_859862.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
40ref|XM_532634.2| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
41ref|XM_859826.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
42ref|XM_859805.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
43ref|XM_859766.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
44ref|XM_846932.1| PREDICTED: Canis familiaris similar to Protein ... 40 2.6
45emb|BX071199.1|CNS09R3N Single read from an extremity of a full-... 40 2.6
46emb|BX069938.1|CNS09Q4M Single read from an extremity of a full-... 40 2.6
47emb|BX067989.1|CNS09OMH Single read from an extremity of a full-... 40 2.6
48emb|BX066477.1|CNS09NGH Single read from an extremity of a full-... 40 2.6
49emb|BX066476.1|CNS09NGG Single read from an extremity of a full-... 40 2.6
50emb|BX064704.1|CNS09M38 Single read from an extremity of a full-... 40 2.6
51emb|BX059967.1|CNS09IFN Single read from an extremity of a full-... 40 2.6
52emb|BX053101.1|CNS09D4X Single read from an extremity of a full-... 40 2.6
53emb|BX044302.1|CNS096CI Single read from an extremity of a full-... 40 2.6
54emb|BX044301.1|CNS096CH Single read from an extremity of a full-... 40 2.6
55emb|BX027745.1|CNS08TKL Single read from an extremity of a full-... 40 2.6
56gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
57gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, c... 40 2.6
58dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
59dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
60dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
61gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6

>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3588

 Score =  220 bits (111), Expect = 1e-54
 Identities = 120/123 (97%)
 Strand = Plus / Plus

                                                                       
Query: 85  ggccgcgccgcaggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggag 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggccgcgccgcaggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggag 364

                                                                       
Query: 145 ggagaccatgcggcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 365 ggagaccatgcgccgcctcttcgcctccgacgtcctcgtctccgggctcaacgggcttgg 424

              
Query: 205 cgc 207
           |||
Sbjct: 425 cgc 427



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  147 bits (74), Expect = 2e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                            
Query: 97       ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
                |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10276948 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 10276889

                                                          
Query: 157      gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198
                ||| |||||||| ||| |||||||||||||||| || |||||
Sbjct: 10276888 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 10276847



 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      cttcccccgacgccgccccac 55
               |||||||||||||||||||||
Sbjct: 9600722 cttcccccgacgccgccccac 9600702



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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score =  147 bits (74), Expect = 2e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                          
Query: 97     ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
              |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 138361 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 138302

                                                        
Query: 157    gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198
              ||| |||||||| ||| |||||||||||||||| || |||||
Sbjct: 138301 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 138260



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  147 bits (74), Expect = 2e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                            
Query: 97       ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
                |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10275049 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 10274990

                                                          
Query: 157      gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198
                ||| |||||||| ||| |||||||||||||||| || |||||
Sbjct: 10274989 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 10274948



 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      cttcccccgacgccgccccac 55
               |||||||||||||||||||||
Sbjct: 9598843 cttcccccgacgccgccccac 9598823



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>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full
           insert sequence
          Length = 3682

 Score =  147 bits (74), Expect = 2e-32
 Identities = 95/102 (93%)
 Strand = Plus / Plus

                                                                       
Query: 97  ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 369 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 428

                                                     
Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198
           ||| |||||||| ||| |||||||||||||||| || |||||
Sbjct: 429 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 470



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>ref|NM_185567.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3522

 Score =  143 bits (72), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                       
Query: 97  ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
           |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 330 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 389

                                                           
Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204
            ||||||||||||||| | ||||||||||| || ||||| ||||||||
Sbjct: 390 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 437



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  143 bits (72), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                            
Query: 97       ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
                |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 29425632 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 29425691

                                                                
Query: 157      gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204
                 ||||||||||||||| | ||||||||||| || ||||| ||||||||
Sbjct: 29425692 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 29425739



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>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full
           insert sequence
          Length = 3522

 Score =  143 bits (72), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                       
Query: 97  ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
           |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 330 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 389

                                                           
Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204
            ||||||||||||||| | ||||||||||| || ||||| ||||||||
Sbjct: 390 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 437



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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score =  143 bits (72), Expect = 2e-31
 Identities = 99/108 (91%)
 Strand = Plus / Plus

                                                                         
Query: 97    ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156
             |||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 88554 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 88613

                                                             
Query: 157   gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204
              ||||||||||||||| | ||||||||||| || ||||| ||||||||
Sbjct: 88614 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 88661



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  115 bits (58), Expect = 6e-23
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                          
Query: 98     gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
              |||||||| ||||||||||||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 300113

                                                                
Query: 158    cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
              ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 300112 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 300063



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  115 bits (58), Expect = 6e-23
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                          
Query: 98     gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
              |||||||| ||||||||||||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 300113

                                                                
Query: 158    cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
              ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 300112 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 300063



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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score =  115 bits (58), Expect = 6e-23
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
            |||||||| ||||||||||||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 4821 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 4880

                                                              
Query: 158  cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
            ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 4881 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 4930



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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score =  115 bits (58), Expect = 6e-23
 Identities = 97/110 (88%)
 Strand = Plus / Minus

                                                                        
Query: 98   gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
            |||||||| ||||||||||||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 7490 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 7431

                                                              
Query: 158  cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
            ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 7430 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 7381



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  107 bits (54), Expect = 1e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                          
Query: 98     gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
              |||||||| |||||||| |||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 317078

                                                                
Query: 158    cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
              ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 317077 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 317028



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>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
           insert sequence
          Length = 3724

 Score =  107 bits (54), Expect = 1e-20
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
           |||||||| |||||||| |||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 438 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 497

                                                             
Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
           ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 498 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 547



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  107 bits (54), Expect = 1e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                          
Query: 98     gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
              |||||||| |||||||| |||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 317078

                                                                
Query: 158    cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
              ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 317077 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 317028



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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score =  107 bits (54), Expect = 1e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 98    gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
             |||||||| |||||||| |||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 50188 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 50129

                                                               
Query: 158   cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207
             ||||||||||||||| ||||||||||||| || |||||||||||||||||
Sbjct: 50128 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 50079



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>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
           ||||||||||||||||| |||||| | ||||||||||| || ||| | |||||||||  |
Sbjct: 306 gagatcgacgaggacctgcacagccgccagctcgccgtctatgggcgcgagaccatgaag 365

                                        
Query: 158 cgcctcttcgcctccgacgtcctcgtctc 186
           |||||||||| |||| |||||||||||||
Sbjct: 366 cgcctcttcggctccaacgtcctcgtctc 394



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>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157
           ||||||||||||||||| |||||| | ||||||||||| || ||  | |||||||||  |
Sbjct: 401 gagatcgacgaggacctgcacagccgccagctcgccgtctatggccgcgagaccatgaag 460

                                        
Query: 158 cgcctcttcgcctccgacgtcctcgtctc 186
           |  ||||||| |||| |||||||||||||
Sbjct: 461 ccgctcttcggctccaacgtcctcgtctc 489



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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 87      ccgcgccgcaggagatcgacga 108
               ||||||||||||||||||||||
Sbjct: 1346072 ccgcgccgcaggagatcgacga 1346093



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>ref|XM_465038.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1397

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 171 ccgacgtcctcgtctccgggc 191
           |||||||||||||||||||||
Sbjct: 191 ccgacgtcctcgtctccgggc 171



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>emb|AL138828.15| Human DNA sequence from clone RP11-472E5 on chromosome 6 Contains the
             3' end of the PDE7B gene for phosphodiesterase 7B, the 5'
             end of a novel gene and the 3' end of a novel gene,
             complete sequence
          Length = 141540

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    cctcccccttcccccgacgcc 48
             |||||||||||||||||||||
Sbjct: 37745 cctcccccttcccccgacgcc 37765



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>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    cttcccccgacgccgccccac 55
             |||||||||||||||||||||
Sbjct: 21621 cttcccccgacgccgccccac 21601



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>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence
          Length = 138939

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 107  gaggacctccacagcaggcag 127
            |||||||||||||||||||||
Sbjct: 3328 gaggacctccacagcaggcag 3308



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 171      ccgacgtcctcgtctccgggc 191
                |||||||||||||||||||||
Sbjct: 11070982 ccgacgtcctcgtctccgggc 11070962



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 158      cgcctcttcgcctccgacgtcctcgtctccgg 189
                ||||||| |||||||  |||||||||||||||
Sbjct: 35224221 cgcctctccgcctccaccgtcctcgtctccgg 35224252



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>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009C19, from chromosome 3, complete sequence
          Length = 131709

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    cttcccccgacgccgccccac 55
             |||||||||||||||||||||
Sbjct: 11964 cttcccccgacgccgccccac 11984



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>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_E11
          Length = 133524

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   ccgacgtcctcgtctccgggc 191
             |||||||||||||||||||||
Sbjct: 53676 ccgacgtcctcgtctccgggc 53656



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>dbj|AK101883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070K23, full
           insert sequence
          Length = 1397

 Score = 42.1 bits (21), Expect = 0.66
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 171 ccgacgtcctcgtctccgggc 191
           |||||||||||||||||||||
Sbjct: 191 ccgacgtcctcgtctccgggc 171



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>ref|XM_468431.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 158 cgcctcttcgcctccgacgtcctcgtctccgg 189
           ||||||| |||||||  |||||||||||||||
Sbjct: 718 cgcctctccgcctccaccgtcctcgtctccgg 749



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>ref|XM_756491.1| Ustilago maydis 521 hypothetical protein (UM05437.1) partial mRNA
          Length = 1878

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  cgtcctcgtctccgggctca 194
            ||||||||||||||||||||
Sbjct: 1129 cgtcctcgtctccgggctca 1110



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>ref|XM_860007.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 15 (LOC475411), mRNA
          Length = 5646

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859991.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 14 (LOC475411), mRNA
          Length = 5674

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859971.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 13 (LOC475411), mRNA
          Length = 5692

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859953.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 12 (LOC475411), mRNA
          Length = 5493

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859934.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 11 (LOC475411), mRNA
          Length = 5556

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859917.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 10 (LOC475411), mRNA
          Length = 5586

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859897.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 9 (LOC475411), mRNA
          Length = 5556

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859881.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 8 (LOC475411), mRNA
          Length = 5484

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859862.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 7 (LOC475411), mRNA
          Length = 5316

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_532634.2| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 1 (LOC475411), mRNA
          Length = 2934

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859826.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 6 (LOC475411), mRNA
          Length = 1570

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859805.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 5 (LOC475411), mRNA
          Length = 739

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_859766.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 3 (LOC475411), mRNA
          Length = 5625

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>ref|XM_846932.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1
           regulatory subunit 12A (Myosin phosphatase targeting
           subunit 1) (Myosin phosphatase target subunit 1)
           (Protein phosphatase myosin-binding subunit), transcript
           variant 2 (LOC475411), mRNA
          Length = 5661

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  cgccgcctcccccttccccc 42
           ||||||||||||||||||||
Sbjct: 167 cgccgcctcccccttccccc 186



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>emb|BX071199.1|CNS09R3N Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC8CE09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 840

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 262 cctccacagcaggcagctcg 281



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>emb|BX069938.1|CNS09Q4M Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC6DB12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 528

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 270 cctccacagcaggcagctcg 289



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>emb|BX067989.1|CNS09OMH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC52AA03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 815

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 7   cctccacagcaggcagctcg 26



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>emb|BX066477.1|CNS09NGH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC5DC03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1008

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 832 cctccacagcaggcagctcg 813



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>emb|BX066476.1|CNS09NGG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC5DC03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1062

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 189 cctccacagcaggcagctcg 208



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>emb|BX064704.1|CNS09M38 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC48AH04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 893

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 193 cctccacagcaggcagctcg 212



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>emb|BX059967.1|CNS09IFN Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC40AF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 648

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 265 cctccacagcaggcagctcg 284



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>emb|BX053101.1|CNS09D4X Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC30CD06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 615

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 162 cctccacagcaggcagctcg 181



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>emb|BX044302.1|CNS096CI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC17DC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 930

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 850 cctccacagcaggcagctcg 831



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>emb|BX044301.1|CNS096CH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC17DC06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 982

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 178 cctccacagcaggcagctcg 197



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>emb|BX027745.1|CNS08TKL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA41CA09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 540

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cctccacagcaggcagctcg 131
           ||||||||||||||||||||
Sbjct: 307 cctccacagcaggcagctcg 326



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>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16,
              complete sequence
          Length = 126133

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 11     ccacaacaccagcgccgcctcccc 34
              ||||| ||||||||||||||||||
Sbjct: 124979 ccacaccaccagcgccgcctcccc 125002



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>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence
          Length = 173644

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     ccacaacaccagcgccgcctcccc 34
              ||||| ||||||||||||||||||
Sbjct: 114799 ccacaccaccagcgccgcctcccc 114776



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 11      ccacaacaccagcgccgcctcccc 34
               ||||| ||||||||||||||||||
Sbjct: 5428849 ccacaccaccagcgccgcctcccc 5428872



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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 158   cgcctcttcgcctccgacgtcctcgtctccgg 189
             ||||||| |||||||  |||||||||||||||
Sbjct: 36271 cgcctctccgcctccaccgtcctcgtctccgg 36302



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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 158    cgcctcttcgcctccgacgtcctcgtctccgg 189
              ||||||| |||||||  |||||||||||||||
Sbjct: 119577 cgcctctccgcctccaccgtcctcgtctccgg 119608



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 11      ccacaacaccagcgccgcctcccc 34
               ||||| ||||||||||||||||||
Sbjct: 5429636 ccacaccaccagcgccgcctcccc 5429659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,390,394
Number of Sequences: 3902068
Number of extensions: 1390394
Number of successful extensions: 106869
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105978
Number of HSP's gapped (non-prelim): 890
length of query: 207
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 185
effective length of database: 17,147,199,772
effective search space: 3172231957820
effective search space used: 3172231957820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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