Clone Name | bastl50h05 |
---|---|
Clone Library Name | barley_pub |
>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 Score = 220 bits (111), Expect = 1e-54 Identities = 120/123 (97%) Strand = Plus / Plus Query: 85 ggccgcgccgcaggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggag 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ggccgcgccgcaggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggag 364 Query: 145 ggagaccatgcggcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 365 ggagaccatgcgccgcctcttcgcctccgacgtcctcgtctccgggctcaacgggcttgg 424 Query: 205 cgc 207 ||| Sbjct: 425 cgc 427
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 147 bits (74), Expect = 2e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10276948 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 10276889 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198 ||| |||||||| ||| |||||||||||||||| || ||||| Sbjct: 10276888 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 10276847 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 cttcccccgacgccgccccac 55 ||||||||||||||||||||| Sbjct: 9600722 cttcccccgacgccgccccac 9600702
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 147 bits (74), Expect = 2e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138361 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 138302 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198 ||| |||||||| ||| |||||||||||||||| || ||||| Sbjct: 138301 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 138260
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 147 bits (74), Expect = 2e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10275049 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 10274990 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198 ||| |||||||| ||| |||||||||||||||| || ||||| Sbjct: 10274989 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 10274948 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 cttcccccgacgccgccccac 55 ||||||||||||||||||||| Sbjct: 9598843 cttcccccgacgccgccccac 9598823
>dbj|AK120544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129J22, full insert sequence Length = 3682 Score = 147 bits (74), Expect = 2e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 369 ggagatcgacgaggacctgcacagcaggcagctcgccgtgtacgggagggagacgatgcg 428 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacgg 198 ||| |||||||| ||| |||||||||||||||| || ||||| Sbjct: 429 gcggctcttcgcgtccaacgtcctcgtctccggactgaacgg 470
>ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3522 Score = 143 bits (72), Expect = 2e-31 Identities = 99/108 (91%) Strand = Plus / Plus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 330 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 389 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204 ||||||||||||||| | ||||||||||| || ||||| |||||||| Sbjct: 390 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 437
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 143 bits (72), Expect = 2e-31 Identities = 99/108 (91%) Strand = Plus / Plus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 29425632 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 29425691 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204 ||||||||||||||| | ||||||||||| || ||||| |||||||| Sbjct: 29425692 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 29425739
>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full insert sequence Length = 3522 Score = 143 bits (72), Expect = 2e-31 Identities = 99/108 (91%) Strand = Plus / Plus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 330 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 389 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204 ||||||||||||||| | ||||||||||| || ||||| |||||||| Sbjct: 390 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 437
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 143 bits (72), Expect = 2e-31 Identities = 99/108 (91%) Strand = Plus / Plus Query: 97 ggagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcg 156 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 88554 ggagattgacgaggacctgcacagcaggcagctcgccgtctacgggagggagaccatgcg 88613 Query: 157 gcgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcgg 204 ||||||||||||||| | ||||||||||| || ||||| |||||||| Sbjct: 88614 ccgcctcttcgcctcccatgtcctcgtctctggcctcaatggcctcgg 88661
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 115 bits (58), Expect = 6e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| ||||||||||||||| | ||||||||||| || || | ||||||||| | Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 300113 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 300112 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 300063
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 115 bits (58), Expect = 6e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| ||||||||||||||| | ||||||||||| || || | ||||||||| | Sbjct: 300172 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 300113 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 300112 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 300063
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 115 bits (58), Expect = 6e-23 Identities = 97/110 (88%) Strand = Plus / Plus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| ||||||||||||||| | ||||||||||| || || | ||||||||| | Sbjct: 4821 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 4880 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 4881 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 4930
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 115 bits (58), Expect = 6e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| ||||||||||||||| | ||||||||||| || || | ||||||||| | Sbjct: 7490 gagatcgatgaggacctccacagccgccagctcgccgtctatggccgcgagaccatgaag 7431 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 7430 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 7381
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 107 bits (54), Expect = 1e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| |||||||| |||||| | ||||||||||| || || | ||||||||| | Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 317078 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 317077 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 317028
>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full insert sequence Length = 3724 Score = 107 bits (54), Expect = 1e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| |||||||| |||||| | ||||||||||| || || | ||||||||| | Sbjct: 438 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 497 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 498 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 547
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 107 bits (54), Expect = 1e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| |||||||| |||||| | ||||||||||| || || | ||||||||| | Sbjct: 317137 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 317078 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 317077 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 317028
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 107 bits (54), Expect = 1e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 |||||||| |||||||| |||||| | ||||||||||| || || | ||||||||| | Sbjct: 50188 gagatcgatgaggaccttcacagccgccagctcgccgtctatggccgcgagaccatgaag 50129 Query: 158 cgcctcttcgcctccgacgtcctcgtctccgggctcaacggcctcggcgc 207 ||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct: 50128 cgcctcttcgcctccaacgtcctcgtctctggcctcaacggcctcggcgc 50079
>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds Length = 3586 Score = 89.7 bits (45), Expect = 3e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 ||||||||||||||||| |||||| | ||||||||||| || ||| | ||||||||| | Sbjct: 306 gagatcgacgaggacctgcacagccgccagctcgccgtctatgggcgcgagaccatgaag 365 Query: 158 cgcctcttcgcctccgacgtcctcgtctc 186 |||||||||| |||| ||||||||||||| Sbjct: 366 cgcctcttcggctccaacgtcctcgtctc 394
>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3695 Score = 65.9 bits (33), Expect = 5e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 98 gagatcgacgaggacctccacagcaggcagctcgccgtgtacgggagggagaccatgcgg 157 ||||||||||||||||| |||||| | ||||||||||| || || | ||||||||| | Sbjct: 401 gagatcgacgaggacctgcacagccgccagctcgccgtctatggccgcgagaccatgaag 460 Query: 158 cgcctcttcgcctccgacgtcctcgtctc 186 | ||||||| |||| ||||||||||||| Sbjct: 461 ccgctcttcggctccaacgtcctcgtctc 489
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 87 ccgcgccgcaggagatcgacga 108 |||||||||||||||||||||| Sbjct: 1346072 ccgcgccgcaggagatcgacga 1346093
>ref|XM_465038.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1397 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccgacgtcctcgtctccgggc 191 ||||||||||||||||||||| Sbjct: 191 ccgacgtcctcgtctccgggc 171
>emb|AL138828.15| Human DNA sequence from clone RP11-472E5 on chromosome 6 Contains the 3' end of the PDE7B gene for phosphodiesterase 7B, the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 141540 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 cctcccccttcccccgacgcc 48 ||||||||||||||||||||| Sbjct: 37745 cctcccccttcccccgacgcc 37765
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 cttcccccgacgccgccccac 55 ||||||||||||||||||||| Sbjct: 21621 cttcccccgacgccgccccac 21601
>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence Length = 138939 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggacctccacagcaggcag 127 ||||||||||||||||||||| Sbjct: 3328 gaggacctccacagcaggcag 3308
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccgacgtcctcgtctccgggc 191 ||||||||||||||||||||| Sbjct: 11070982 ccgacgtcctcgtctccgggc 11070962 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 158 cgcctcttcgcctccgacgtcctcgtctccgg 189 ||||||| ||||||| ||||||||||||||| Sbjct: 35224221 cgcctctccgcctccaccgtcctcgtctccgg 35224252
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 cttcccccgacgccgccccac 55 ||||||||||||||||||||| Sbjct: 11964 cttcccccgacgccgccccac 11984
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccgacgtcctcgtctccgggc 191 ||||||||||||||||||||| Sbjct: 53676 ccgacgtcctcgtctccgggc 53656
>dbj|AK101883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070K23, full insert sequence Length = 1397 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccgacgtcctcgtctccgggc 191 ||||||||||||||||||||| Sbjct: 191 ccgacgtcctcgtctccgggc 171
>ref|XM_468431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 158 cgcctcttcgcctccgacgtcctcgtctccgg 189 ||||||| ||||||| ||||||||||||||| Sbjct: 718 cgcctctccgcctccaccgtcctcgtctccgg 749
>ref|XM_756491.1| Ustilago maydis 521 hypothetical protein (UM05437.1) partial mRNA Length = 1878 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 cgtcctcgtctccgggctca 194 |||||||||||||||||||| Sbjct: 1129 cgtcctcgtctccgggctca 1110
>ref|XM_860007.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 15 (LOC475411), mRNA Length = 5646 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859991.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 14 (LOC475411), mRNA Length = 5674 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859971.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 13 (LOC475411), mRNA Length = 5692 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859953.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 12 (LOC475411), mRNA Length = 5493 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859934.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 11 (LOC475411), mRNA Length = 5556 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859917.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 10 (LOC475411), mRNA Length = 5586 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859897.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 9 (LOC475411), mRNA Length = 5556 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859881.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 8 (LOC475411), mRNA Length = 5484 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859862.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 7 (LOC475411), mRNA Length = 5316 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_532634.2| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 1 (LOC475411), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859826.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 6 (LOC475411), mRNA Length = 1570 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859805.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 5 (LOC475411), mRNA Length = 739 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_859766.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 3 (LOC475411), mRNA Length = 5625 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>ref|XM_846932.1| PREDICTED: Canis familiaris similar to Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit), transcript variant 2 (LOC475411), mRNA Length = 5661 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgccgcctcccccttccccc 42 |||||||||||||||||||| Sbjct: 167 cgccgcctcccccttccccc 186
>emb|BX071199.1|CNS09R3N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8CE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 840 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 262 cctccacagcaggcagctcg 281
>emb|BX069938.1|CNS09Q4M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 528 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 270 cctccacagcaggcagctcg 289
>emb|BX067989.1|CNS09OMH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC52AA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 7 cctccacagcaggcagctcg 26
>emb|BX066477.1|CNS09NGH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC5DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1008 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 832 cctccacagcaggcagctcg 813
>emb|BX066476.1|CNS09NGG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC5DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1062 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 189 cctccacagcaggcagctcg 208
>emb|BX064704.1|CNS09M38 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC48AH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 893 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 193 cctccacagcaggcagctcg 212
>emb|BX059967.1|CNS09IFN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC40AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 648 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 265 cctccacagcaggcagctcg 284
>emb|BX053101.1|CNS09D4X Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC30CD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 615 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 162 cctccacagcaggcagctcg 181
>emb|BX044302.1|CNS096CI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC17DC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 850 cctccacagcaggcagctcg 831
>emb|BX044301.1|CNS096CH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17DC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 982 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 178 cctccacagcaggcagctcg 197
>emb|BX027745.1|CNS08TKL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41CA09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 540 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cctccacagcaggcagctcg 131 |||||||||||||||||||| Sbjct: 307 cctccacagcaggcagctcg 326
>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16, complete sequence Length = 126133 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccacaacaccagcgccgcctcccc 34 ||||| |||||||||||||||||| Sbjct: 124979 ccacaccaccagcgccgcctcccc 125002
>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence Length = 173644 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 ccacaacaccagcgccgcctcccc 34 ||||| |||||||||||||||||| Sbjct: 114799 ccacaccaccagcgccgcctcccc 114776
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccacaacaccagcgccgcctcccc 34 ||||| |||||||||||||||||| Sbjct: 5428849 ccacaccaccagcgccgcctcccc 5428872
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 158 cgcctcttcgcctccgacgtcctcgtctccgg 189 ||||||| ||||||| ||||||||||||||| Sbjct: 36271 cgcctctccgcctccaccgtcctcgtctccgg 36302
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 158 cgcctcttcgcctccgacgtcctcgtctccgg 189 ||||||| ||||||| ||||||||||||||| Sbjct: 119577 cgcctctccgcctccaccgtcctcgtctccgg 119608
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 ccacaacaccagcgccgcctcccc 34 ||||| |||||||||||||||||| Sbjct: 5429636 ccacaccaccagcgccgcctcccc 5429659 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,390,394 Number of Sequences: 3902068 Number of extensions: 1390394 Number of successful extensions: 106869 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105978 Number of HSP's gapped (non-prelim): 890 length of query: 207 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 185 effective length of database: 17,147,199,772 effective search space: 3172231957820 effective search space used: 3172231957820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)