>CDC6_PYRKO (Q5JET2) Cell division control protein 6 homolog (CDC6 homolog)|
          Length = 415

 Score = 35.0 bits (79), Expect = 0.070
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +1

Query: 202 PEVITIQAKTIDAAAVEIIGILEDTRKGNVIFVRGWNGFGASAALKAVAQRLKSSKSKFN 381
           P+ +  + K ID  A  ++ +L      NV FV G  G G +  +K V + LK    K+N
Sbjct: 32  PKELPHRHKQIDDLAHILVPVLRGETPSNV-FVYGKTGTGKTVTVKFVTEELKKISQKYN 90

Query: 382 ---RVIHVDCSL 408
               VI+++C +
Sbjct: 91  IPVEVIYINCEI 102

>CDC6_PYRAB (Q9V2F2) Cell division control protein 6 homolog (CDC6 homolog)|
          Length = 419

 Score = 34.7 bits (78), Expect = 0.092
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +1

Query: 202 PEVITIQAKTIDAAAVEIIGILEDTRKGNVIFVRGWNGFGASAALKAVAQRLKSSKSKFN 381
           P+ +  + + I+A A  ++ +L+     N IFV G  G G +  +K V + LK    K+N
Sbjct: 35  PKDLPHRHEQIEALAQILVPVLKGETPSN-IFVYGKTGTGKTVTVKFVTEELKKVSQKYN 93

Query: 382 ---RVIHVDCSL 408
               VI+++C +
Sbjct: 94  IPVEVIYINCEI 105

>CDC6_PYRHO (O57864) Cell division control protein 6 homolog (CDC6 homolog)|
          Length = 419

 Score = 32.0 bits (71), Expect = 0.59
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +1

Query: 202 PEVITIQAKTIDAAAVEIIGILEDTRKGNVIFVRGWNGFGASAALKAVAQRLKSSKSKFN 381
           P+ +  + + I+  A  ++ +L+     N IFV G  G G +  +K V + LK    K+N
Sbjct: 35  PKDLPHRHEQIETLAQILVPVLKGETPSN-IFVYGKTGTGKTVTVKFVTEELKKVSHKYN 93

Query: 382 ---RVIHVDCSL 408
               VI+++C +
Sbjct: 94  IPVDVIYINCEI 105

>CDC6_PYRFU (P81413) Cell division control protein 6 homolog (CDC6 homolog)|
          Length = 420

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +1

Query: 202 PEVITIQAKTIDAAAVEIIGILEDTRKGNVIFVRGWNGFGASAALKAVAQRLKSSKSKFN 381
           P+ +  + + I+  A  ++ +L      N IFV G  G G +  +K V + LK    K+N
Sbjct: 36  PKDLPHRHEQIETLAQILVPVLRGETPSN-IFVYGKTGTGKTVTVKFVTEELKRISEKYN 94

Query: 382 ---RVIHVDCSL 408
               VI+++C +
Sbjct: 95  IPVDVIYINCEI 106

>MALF_PHOLL (Q7N984) Maltose transport system permease protein malF|
          Length = 518

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 335 SAADAPNPFQPRTKITFPFLVSSKMPIISTAAA 237
           SA D   PFQ   KITFP L+    P++  + A
Sbjct: 407 SAMDGAGPFQNFFKITFPLLIKPLTPLMIASFA 439

>ABCE1_MOUSE (P61222) ATP-binding cassette sub-family E member 1 (RNase L|
           inhibitor) (Ribonuclease 4 inhibitor) (RNS4I)
          Length = 599

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 277 RKGNVIFVRGWNGFGASAALKAVAQRLKSSKSKFN 381
           R G V+ + G NG G S ALK +A + K +  K++
Sbjct: 101 RPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYD 135

>ABCE1_HUMAN (P61221) ATP-binding cassette sub-family E member 1 (RNase L|
           inhibitor) (Ribonuclease 4 inhibitor) (RNS4I) (2'-5'
           oligoadenylate-binding protein) (HuHP68)
          Length = 599

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 277 RKGNVIFVRGWNGFGASAALKAVAQRLKSSKSKFN 381
           R G V+ + G NG G S ALK +A + K +  K++
Sbjct: 101 RPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYD 135

>PDR3_ARATH (Q7PC88) Probable pleiotropic drug resistance protein 3|
          Length = 1426

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 264 LGGYKKRKCDLRPWLEWIWG 323
           LGG+   K D++PW  W+WG
Sbjct: 690 LGGFVIPKADIKPW--WVWG 707

>YE38_SCHPO (O13892) Hypothetical protein C20G4.08 in chromosome I|
          Length = 1076

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 126  LVPMSFPSLVNSGTGTSLDTRRKQTESCKPSRIEE 22
            +VP S+P    S    S DT  K  E  +PS  E+
Sbjct: 896  VVPSSYPPAAESNVSVSSDTSTKDVEKQEPSSAEQ 930

>PREB_HUMAN (Q9HCU5) Prolactin regulatory element-binding protein (Mammalian|
           guanine nucleotide exchange factor mSec12)
          Length = 417

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = -2

Query: 367 LMILGVALLP*VLRMPQIHSNHGRRSHFLFLYPPRCQLSLLPQHR----WFLL 221
           +++  VA LP   R P++  +H   + F      RCQL LLP  R    W LL
Sbjct: 344 IVVTDVAFLPEKGRGPELLGSH-ETALFSVAVDSRCQLHLLPSRRSVPVWLLL 395

>SNX11_HUMAN (Q9Y5W9) Sorting nexin-11|
          Length = 270

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 11  ACIHSSIREGLQLSVCLRRVSRLVPVPELTKEGKDIGTKE 130
           +C+    RE + L   L+R + LVPVPEL  +    GT +
Sbjct: 54  SCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGTSD 93

>MALF_YERPE (Q74RF9) Maltose transport system permease protein malF|
          Length = 530

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -1

Query: 335 SAADAPNPFQPRTKITFPFLVSSKMPIISTAAASMVFAWIVITSGMTN 192
           SA D   PFQ   +ITFP L+    P++  A+ +  F   V+   +TN
Sbjct: 419 SAMDGAGPFQNFFRITFPLLIKPLTPLM-IASFAFNFNNFVLIQLLTN 465

>PIT_MYCTU (O06411) Probable low-affinity inorganic phosphate transporter|
          Length = 417

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
 Frame = -1

Query: 389 ITLLNFDFDD-FRRCATALSAADAPNPFQPRTKITFPFLVSSKMPIISTAAASMVFAWIV 213
           +T L FDF + F     A++ + A     PR  +  P +++     +STA A+       
Sbjct: 13  VTALAFDFTNGFHDTGNAMATSIASGALAPRVAVALPAVLNLIGAFLSTAVAA------T 66

Query: 212 ITSGMTNKSFECQQFRFESLAHRSVCSILWCQCPFLPWLI 93
           I  G+ + +    +  F  L    V  I+W     L WL+
Sbjct: 67  IAKGLIDANLVTLELVFAGL----VGGIVW---NLLTWLL 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,426,352
Number of Sequences: 219361
Number of extensions: 1309227
Number of successful extensions: 3532
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3532
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)