>MAN1_MOUSE (Q9WU40) Inner nuclear membrane protein Man1 (LEM domain containing|
           protein 3) (Fragment)
          Length = 331

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +3

Query: 48  LGRRTKGGMASPAAVGGGRLADPLLAADDVVVG-AKDKYWVPADEREILASQSSGGGEQD 224
           LGR +     SP A G G  A    A   V++G + D+  V A  RE  A    GGG + 
Sbjct: 102 LGRLSASAAESPVAGGSGGAAAVPAAGSKVLLGFSSDESDVEASPRE-QAGGGGGGGARR 160

Query: 225 GRAPLLYRTFR 257
            RA L YR  R
Sbjct: 161 DRAALQYRGLR 171

>SYI1_OCEIH (Q8ER41) Isoleucyl-tRNA synthetase 1 (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase 1) (IleRS 1)
          Length = 918

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 144 GAKDKYWVPADEREILASQSSGGGEQDGRAPLLYRTFRVKG 266
           G K  YW P+ E  +  ++      QD R+P +Y  F VKG
Sbjct: 180 GLKPVYWSPSSESALAEAEIE---YQDKRSPSIYVAFEVKG 217

>GPH_XANCP (Q8P8H3) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)|
          Length = 221

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
 Frame = +3

Query: 90  VGGGRLAD------PLL-AADDVVVGAKDKYWVPADEREILASQSSG 209
           +GG  LA+      PLL AAD + V A    +V  DER+ILA++++G
Sbjct: 134 IGGDTLAERKPHPLPLLVAADRIGVAATQCVYVGDDERDILAARAAG 180

>Y4NJ_RHISN (P55582) Hypothetical GMC-type oxidoreductase y4nJ|
          Length = 505

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
 Frame = +3

Query: 6   SLSHSLRVQEQALLLGRRTKGGMASPAAVGGGRLADPLLAADDVVVGAKDKYWVPADERE 185
           SL+  L+++  A+++G          +  GG  +AD L AA   V+  ++   VP+    
Sbjct: 6   SLNSELQLEADAVIIG----------SGAGGASVADVLTAAGLYVIMLEEGGHVPSSSAS 55

Query: 186 ILASQS-----SGGG--EQDGRAPLLYRTFRVKG 266
             AS++      GGG     GR P+ Y   R  G
Sbjct: 56  PFASEAFAAAWRGGGLTAAIGRPPIAYAEGRCVG 89

>RC3H1_MOUSE (Q4VGL6) Roquin (RING finger and C3H zinc finger protein 1)|
           (Sanroque protein)
          Length = 1130

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 260 QGLLHQPLQIGSKCSSRSEGAPPPAPFYIDETR*YLNLNVHNKQY 394
           QG+ + P    S+       AP P P Y+D    YL   V N QY
Sbjct: 610 QGMYYTPPPCVSRFVRPPPSAPEPGPPYLDHYSPYLQDRVINSQY 654


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,253,274
Number of Sequences: 219361
Number of extensions: 1472090
Number of successful extensions: 3872
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3868
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)