ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 35 0.034
2RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 33 0.22
3BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ... 32 0.29
4DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 30 1.4
5PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 30 1.9
6CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17) 29 3.2
7BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 28 5.5

>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 206 DAEAMRAVAKALGADKLAGWGAGEPCSPRWPGVTCDSGGRVTAIQLTDKRLTG 364
           D  AM ++ K+L      GW   +PC  +W  + C    RVT IQ+    L G
Sbjct: 28  DLSAMLSLKKSLNPPSSFGWSDPDPC--KWTHIVCTGTKRVTRIQIGHSGLQG 78



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +2

Query: 203 QDAEAMRAVAKALG--ADKLAGWGAGEPCSP-RWPGVTCDSGGRVTAIQLTDKRLTG 364
           QDA  +R     L   A  L+ W      +P +W GV+CD+   V ++ L+   L G
Sbjct: 23  QDATILRQAKLGLSDPAQSLSSWSDNNDVTPCKWLGVSCDATSNVVSVDLSSFMLVG 79



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>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +2

Query: 263 WGAG-EPCSPRWPGVTCDSGGRVTAIQLTDKRLTG 364
           +G+G +PC+  W GV+C S GRV  + L +  LTG
Sbjct: 58  YGSGRDPCT--WRGVSCSSDGRVIGLDLRNGGLTG 90



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +2

Query: 203 QDAEAMRAVAKALGADKLA---GWGAGEPCSPRWPGVTCD-SGGRVTAIQL 343
           +D  A+ A   +L    L     W     C   W G++CD   GRVT I L
Sbjct: 30  KDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISL 80



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +2

Query: 206 DAEAMRAVAKALGADKLAGW---GAGEPCSPRWPGVTCDSG--GRVTAIQLTDKRLTG 364
           D EA+R     L   K  GW    +   C   W G+TC+S   GRV  ++L +K+L+G
Sbjct: 35  DLEALRDFIAHL-EPKPDGWINSSSSTDCC-NWTGITCNSNNTGRVIRLELGNKKLSG 90



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>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)|
          Length = 398

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +2

Query: 212 EAMRAVAKALGADKLAGWGAGEPCSPRWPGVTCDSGGRVTAIQL 343
           E MR +A A   ++L+GW   EP +P  PG++    G +TA +L
Sbjct: 303 ERMRELA-AFTRERLSGWRGLEPVTPAHPGLS----GAMTAFRL 341



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 293 WPGVTCDSGGRVTAIQLTDKRLTG 364
           W GV+C   GR+  + L +  LTG
Sbjct: 68  WRGVSCSDDGRIVGLDLRNSGLTG 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,164,813
Number of Sequences: 219361
Number of extensions: 150317
Number of successful extensions: 925
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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