Clone Name | bastl50f11 |
---|---|
Clone Library Name | barley_pub |
>COBS_RHILO (Q98KP0) Cobalamin synthase (EC 2.-.-.-)| Length = 259 Score = 32.7 bits (73), Expect = 0.27 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 18 LAAASWVEPAPGILPPKIGTISLFSAARFGVGRG 119 LAAA W P G+L IG I +A RFG+ G Sbjct: 39 LAAAIWAAPVAGLLVGLIGAIVFATAERFGLAMG 72
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 30.8 bits (68), Expect = 1.0 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPD 69 P G PF+ R P PDA ++ G++ RP+ Sbjct: 225 PAPQGDRPFNQRAPRPDANANFGQRAPRPE 254
>ENL_HUMAN (Q03111) Protein ENL| Length = 559 Score = 30.4 bits (67), Expect = 1.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 Query: 170 PGLNPTRPGTAPFSDRIPSPDAKSSRGKK 84 PG +P ++ FSD+ P+ D S+RG+K Sbjct: 312 PGTSPRTSSSSSFSDKKPAKDKSSTRGEK 340
>TGM1_HUMAN (P22735) Protein-glutamine gamma-glutamyltransferase K (EC| 2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K)) (Transglutaminase-1) (Epidermal TGase) Length = 817 Score = 29.3 bits (64), Expect = 3.0 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 167 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRN 78 G NP +P T P + P PD +S RG R+ Sbjct: 13 GGNPLQPPTTPSPEPEPEPDGRSRRGGGRS 42
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 28.9 bits (63), Expect = 4.0 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 167 GLNPTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63 G P++ AP + +PSP +S G RP+LR Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016
>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2| Length = 964 Score = 28.9 bits (63), Expect = 4.0 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 6/60 (10%) Frame = -2 Query: 169 PG*TRRGPEQPHFQIEFPLPTPNLAAEKREIVPIFGGRMPGAG------STHDAAARGRG 8 PG RGP P P P AA + P GG PG G S D GRG Sbjct: 284 PGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSRPGKGKKGGERSWDDNKKGGRG 343
>EXO84_YARLI (Q6C238) Exocyst complex component EXO84| Length = 657 Score = 28.1 bits (61), Expect = 6.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Frame = -2 Query: 145 EQPHFQIEFPLPTPNLAAEKREIVPI-----FGGRMPGAGSTHDAAA 20 ++P+ Q L PN+ + RE V F R+PG G +DAAA Sbjct: 29 QKPYIQDSTHLQLPNVGDKDRERVGNMVKRRFSARIPGQGVPYDAAA 75
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 28.1 bits (61), Expect = 6.8 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -1 Query: 158 PTRPGTAPFSDRIPSPDAKSSRGKKRNRPDLR 63 P++ AP + +PSP +S G RP+LR Sbjct: 1985 PSKDQEAPSPEALPSPGQESPDGPSPRRPELR 2016 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,226,860 Number of Sequences: 219361 Number of extensions: 598670 Number of successful extensions: 2199 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2098 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2199 length of database: 80,573,946 effective HSP length: 33 effective length of database: 73,335,033 effective search space used: 1760040792 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)