ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl50f10 |
|---|---|
| Clone Library Name | barley_pub |
>C89A2_ARATH (Q42602) Cytochrome P450 89A2 (EC 1.14.-.-) (CYPLXXXIX) (ATH 6-1)| Length = 506 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Frame = +3 Query: 231 GHIRTLRQSIFHLAPLLRDLHARYGPVISIRLF-RALVFVSDRRLAHRVLVQGGSTFADR 407 G ++ LR+ + L LR +H R GP++++R+ R +FV+DR L H LV G+ +ADR Sbjct: 42 GTLQWLREGLGGLESYLRSVHHRLGPIVTLRITSRPAIFVADRSLTHEALVLNGAVYADR 101
>C77A1_SOLME (P37123) Cytochrome P450 77A1 (EC 1.14.-.-) (CYPLXXVIIA1)| (P-450EG6) (Fragment) Length = 499 Score = 38.9 bits (89), Expect = 0.007 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +3 Query: 279 LRDLHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSR 413 +RDL +YG + ++++ R ++ V+ LAH L+Q G FA R R Sbjct: 54 IRDLKPKYGSIFTLKMGSRTMIIVASAELAHEALIQKGQIFASRPR 99
>CP1B1_HUMAN (Q16678) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)| Length = 543 Score = 35.0 bits (79), Expect = 0.099 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +3 Query: 288 LHARYGPVISIRLFRA-LVFVSDRRLAHRVLVQGGSTFADR 407 L RYG V IRL +V ++ R H+ LVQ GS FADR Sbjct: 77 LARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADR 117
>C77A3_SOYBN (O48928) Cytochrome P450 77A3 (EC 1.14.-.-)| Length = 513 Score = 35.0 bits (79), Expect = 0.099 Identities = 12/44 (27%), Positives = 29/44 (65%), Gaps = 1/44 (2%) Frame = +3 Query: 279 LRDLHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADR 407 + D+ +YG + ++++ R ++ ++D +L H ++Q G+T+A R Sbjct: 64 VNDVRLKYGSIFTLKMGTRTMIILTDAKLVHEAMIQKGATYATR 107
>CP17A_MOUSE (P27786) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 507 Score = 33.9 bits (76), Expect = 0.22 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRLFEPGLI 434 L +YGP+ S+RL V V +LA VLV+ G F+ R ++ GL+ Sbjct: 56 LQEKYGPIYSLRLGTTTAVIVGHYQLAREVLVKKGKEFSGRPQMVTLGLL 105
>C99A1_SORBI (O48957) Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)| Length = 519 Score = 33.9 bits (76), Expect = 0.22 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +3 Query: 231 GHIRTLRQSIFHLAPLLRDLHARYGPVISIRLFRA-LVFVSDRRLAHRVLVQGGSTFADR 407 G++ L S H+A LRDL ++GPV+ +RL + V +S A VL +TFA R Sbjct: 38 GNLLHLATSQPHVA--LRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASR 95 Query: 408 SRLFEPGLIFTFGSRNIT 461 L +I +GS +++ Sbjct: 96 PSLLVADIIL-YGSMDMS 112
>C71DB_LOTJA (O22307) Cytochrome P450 71D11 (EC 1.14.-.-) (Fragment)| Length = 490 Score = 33.9 bits (76), Expect = 0.22 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 279 LRDLHARYGPVISIRLFRAL-VFVSDRRLAHRVLVQGGSTFADRSRLFEPGLIFTFGSRN 455 LRDL +YGP++ ++L + + VS A V+ TFA R R ++F +GS + Sbjct: 44 LRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVF-YGSTD 102 Query: 456 I 458 I Sbjct: 103 I 103
>CP17A_MESAU (P70687) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 511 Score = 33.1 bits (74), Expect = 0.37 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRLFEPGLI 434 L +YGP+ S+RL V + +LA VLV+ G F+ R + GL+ Sbjct: 56 LQEKYGPIYSLRLGSTTTVIIGQYQLAKEVLVKKGKEFSGRPHMVTLGLL 105
>CP1B1_MOUSE (Q64429) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1) (P450CMEF)| (P450EF) Length = 543 Score = 32.3 bits (72), Expect = 0.64 Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 288 LHARYGPVISIRLFRALVFVSDRRLA-HRVLVQGGSTFADR 407 L RYG V IRL V V + A H+ LVQ GS FADR Sbjct: 77 LARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGSIFADR 117
>CP17A_PANTR (Q8HYN1) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 32.0 bits (71), Expect = 0.83 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRL 416 L +YGP+ S+R+ + V V +LA VL++ G F+ R ++ Sbjct: 56 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQM 99
>CP17A_HUMAN (P05093) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-monooxygenase) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 32.0 bits (71), Expect = 0.83 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRL 416 L +YGP+ S+R+ + V V +LA VL++ G F+ R ++ Sbjct: 56 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQM 99
>CP1B1_RAT (Q64678) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1) (P450RAP)| Length = 543 Score = 31.6 bits (70), Expect = 1.1 Identities = 24/54 (44%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = +3 Query: 249 RQSIFHLAPLLRDLHARYGPVISIRLFRALVFVSDRRLA-HRVLVQGGSTFADR 407 R S + A L R RYG V IRL V V + A H+ LVQ G FADR Sbjct: 68 RASHLYFARLAR----RYGDVFQIRLGSCPVVVLNGESAIHQALVQQGGVFADR 117
>CP17A_PAPHU (Q9GLD2) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRL 416 L +YGP+ S+R+ + V V +LA VL++ G F+ R ++ Sbjct: 56 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQV 99
>CP17A_PAPCY (Q8HYN0) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRL 416 L +YGP+ S+R+ + V V +LA VL++ G F+ R ++ Sbjct: 56 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQV 99
>CP17A_MACMU (Q8HYM9) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRL 416 L +YGP+ S+R+ + V V +LA VL++ G F+ R ++ Sbjct: 56 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQV 99
>CP17A_MACFA (Q2XVA1) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)| (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase) Length = 508 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +3 Query: 288 LHARYGPVISIRL-FRALVFVSDRRLAHRVLVQGGSTFADRSRL 416 L +YGP+ S+R+ + V V +LA VL++ G F+ R ++ Sbjct: 56 LQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQV 99
>C71D7_SOLCH (P93531) Cytochrome P450 71D7 (EC 1.14.-.-)| Length = 500 Score = 30.0 bits (66), Expect = 3.2 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = +3 Query: 276 LLRDLHARYGPVISIRLFR-ALVFVSDRRLAHRVLVQGGSTFADRSRLFEPGLI 434 +LRDL +YGP++ ++L + V V+ +A +VL FA R +L +I Sbjct: 55 VLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDII 108
>MURC_CAMJR (Q5HU47) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 431 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +3 Query: 324 LFRALVFVSDRRLAHRVLVQGGSTFADRSRLFEPGLIFTFGSRNITPRLR 473 +F +FV D + R LV A + ++FE GLI FG+ +I+ +LR Sbjct: 384 VFPKALFVEDIKREGRFLV------ASKGQVFEEGLIIGFGAGDISNKLR 427
>C71D6_SOLCH (P93530) Cytochrome P450 71D6 (EC 1.14.-.-)| Length = 501 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Frame = +3 Query: 255 SIFHLAP-----LLRDLHARYGPVISIRLFR-ALVFVSDRRLAHRVLVQGGSTFADRSRL 416 S+ HLA +LRDL +YGP++ ++L + V V+ +A VL FA R +L Sbjct: 43 SMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKL 102 Query: 417 FEPGLI 434 +I Sbjct: 103 LAMDII 108
>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22| Length = 954 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 472 RRRGVMLREPNVKMSPGSKSRDRS 401 RRRGV R ++ SPGS+SR RS Sbjct: 803 RRRGVGSRRRSLTRSPGSRSRPRS 826
>THAS_RAT (P49430) Thromboxane-A synthase (EC 5.3.99.5) (TXA synthase) (TXS)| Length = 533 Score = 28.9 bits (63), Expect = 7.1 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +3 Query: 285 DLHARYGPVISIRLFRAL-VFVSDRRLAHRVLVQGGSTFADR-SRLFEPGLI 434 +L RYGP+ L R + + +SD + VLV+ S F++R + EP LI Sbjct: 69 ELRERYGPLCGYYLGRRMYIVISDPDMIKEVLVENFSNFSNRMASGLEPKLI 120
>MURC_CAMJE (Q9PNN7) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 432 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +3 Query: 324 LFRALVFVSDRRLAHRVLVQGGSTFADRSRLFEPGLIFTFGSRNITPRLR 473 +F +FV D + + LV A + ++FE GLI FG+ +I+ +LR Sbjct: 385 VFPKALFVEDIKREGKFLV------ASKGQVFEEGLIIGFGAGDISNKLR 428 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,746,333 Number of Sequences: 219361 Number of extensions: 582221 Number of successful extensions: 1712 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1701 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1712 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
