ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl50f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109476.1| Zea mays CL1535_1 mRNA sequence Length = 5375 Score = 422 bits (213), Expect = e-115 Identities = 304/333 (91%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 1 ataaactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1809 ataaactggagttacatcgagtttgttgataatcaagatgtgctagacttgatagagaag 1868 Query: 60 aaaggtggattgattgcgcttctggacgaagcatgtatgtttcccagatcaacacatgag 119 ||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1869 aaaggtggattgattgcacttctggatgaagcatgtatgtttcctagatctacacatgag 1928 Query: 120 acatttgcgcagaagctgtatacaacgtttaagaataacaagcgattcgtcaaaccagag 179 || |||||||||||||| |||||||| ||||||||||||||||| || | ||| ||| || Sbjct: 1929 acgtttgcgcagaagctatatacaacatttaagaataacaagcggtttgccaagccaaag 1988 Query: 180 ctttcacgtacagactttacagtcgtccattatgccggcgatgtgacataccaggctgat 239 |||||||| || || |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1989 ctttcacgcactgattttacagtagtccattatgctggcgatgtgacataccaggctgat 2048 Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgct 299 |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 2049 tatttcttagacaagaacaaagattatgtagtggctgaacatcaggatctgctgaatgct 2108 Query: 300 tcatcatgtccttttgtagctagtttattccct 332 || ||||| | || |||||| ||||||||||| Sbjct: 2109 tcttcatgcctattcgtagctggtttattccct 2141
>gb|AF104924.2|AF104924 Zea mays unconventional myosin heavy chain (MYO1) mRNA, complete cds Length = 5375 Score = 422 bits (213), Expect = e-115 Identities = 304/333 (91%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 1 ataaactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 |||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1809 ataaactggagttacatcgagtttgttgataatcaagatgtgctagacttgatagagaag 1868 Query: 60 aaaggtggattgattgcgcttctggacgaagcatgtatgtttcccagatcaacacatgag 119 ||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1869 aaaggtggattgattgcacttctggatgaagcatgtatgtttcctagatctacacatgag 1928 Query: 120 acatttgcgcagaagctgtatacaacgtttaagaataacaagcgattcgtcaaaccagag 179 || |||||||||||||| |||||||| ||||||||||||||||| || | ||| ||| || Sbjct: 1929 acgtttgcgcagaagctatatacaacatttaagaataacaagcggtttgccaagccaaag 1988 Query: 180 ctttcacgtacagactttacagtcgtccattatgccggcgatgtgacataccaggctgat 239 |||||||| || || |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 1989 ctttcacgcactgattttacagtagtccattatgctggcgatgtgacataccaggctgat 2048 Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgct 299 |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 2049 tatttcttagacaagaacaaagattatgtagtggctgaacatcaggatctgctgaatgct 2108 Query: 300 tcatcatgtccttttgtagctagtttattccct 332 || ||||| | || |||||| ||||||||||| Sbjct: 2109 tcttcatgcctattcgtagctggtttattccct 2141
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 153 bits (77), Expect = 5e-34 Identities = 113/125 (90%) Strand = Plus / Plus Query: 222 gtgacataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacat 281 ||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||||| Sbjct: 88452 gtgacgtaccaggctgattttttcctagacaagaacaaagattatgtagtggctgaacat 88511 Query: 282 caggatttgctgaatgcttcatcatgtccttttgtagctagtttattcccttcactccct 341 |||||||||||||||||||| || |||||||| |||||| |||||| ||| |||||||| Sbjct: 88512 caggatttgctgaatgcttcttcttgtcctttcgtagctgctttatttcctgcactccct 88571 Query: 342 gaaga 346 ||||| Sbjct: 88572 gaaga 88576 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgtatacaacgtttaaga 153 |||||||||| ||||| ||||||||||| |||||||||||| |||||||||| ||||||| Sbjct: 88239 gtatgtttcctagatcgacacatgagacgtttgcgcagaagttgtatacaacatttaaga 88298 Query: 154 ataacaagcgattcgtcaaaccagagctttcacgtacagactttacagtcgtccattatg 213 ||||||| || || | |||||| |||||||||| ||||| |||||| | || ||||||| Sbjct: 88299 ataacaaacggtttgccaaaccgaagctttcacgcacagattttacaattgttcattatg 88358 Query: 214 ccggcgatgt 223 | || ||||| Sbjct: 88359 ctggtgatgt 88368 Score = 95.6 bits (48), Expect = 1e-16 Identities = 58/60 (96%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 1 ataaactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 87173 ataaactggagttacatagagtttgttgataatcaagatgtgttagacttgattgagaag 87232
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 153 bits (77), Expect = 5e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 222 gtgacataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacat 281 ||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||||| Sbjct: 27090439 gtgacgtaccaggctgattttttcctagacaagaacaaagattatgtagtggctgaacat 27090380 Query: 282 caggatttgctgaatgcttcatcatgtccttttgtagctagtttattcccttcactccct 341 |||||||||||||||||||| || |||||||| |||||| |||||| ||| |||||||| Sbjct: 27090379 caggatttgctgaatgcttcttcttgtcctttcgtagctgctttatttcctgcactccct 27090320 Query: 342 gaaga 346 ||||| Sbjct: 27090319 gaaga 27090315 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgtatacaacgtttaaga 153 |||||||||| ||||| ||||||||||| |||||||||||| |||||||||| ||||||| Sbjct: 27090652 gtatgtttcctagatcgacacatgagacgtttgcgcagaagttgtatacaacatttaaga 27090593 Query: 154 ataacaagcgattcgtcaaaccagagctttcacgtacagactttacagtcgtccattatg 213 ||||||| || || | |||||| |||||||||| ||||| |||||| | || ||||||| Sbjct: 27090592 ataacaaacggtttgccaaaccgaagctttcacgcacagattttacaattgttcattatg 27090533 Query: 214 ccggcgatgt 223 | || ||||| Sbjct: 27090532 ctggtgatgt 27090523 Score = 95.6 bits (48), Expect = 1e-16 Identities = 58/60 (96%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 1 ataaactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27091718 ataaactggagttacatagagtttgttgataatcaagatgtgttagacttgattgagaag 27091659 Score = 60.0 bits (30), Expect = 6e-06 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 225 acataccaggctgatca-tttcttagacaagaacaaagattatgtagtggcagaacatca 283 ||||| || |||||||| |||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 30475634 acatatcaagctgatcagtttctt-gacaagaacaaagactatgtggtggcagaacatca 30475692 Query: 284 gg 285 || Sbjct: 30475693 gg 30475694 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaa 58 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 30475058 tttgtggacaatcaagatgtgctggacttaattgagaa 30475095
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 153 bits (77), Expect = 5e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 222 gtgacataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacat 281 ||||| |||||||||||| |||| |||||||||||||||||||||||||||| |||||| Sbjct: 27181762 gtgacgtaccaggctgattttttcctagacaagaacaaagattatgtagtggctgaacat 27181703 Query: 282 caggatttgctgaatgcttcatcatgtccttttgtagctagtttattcccttcactccct 341 |||||||||||||||||||| || |||||||| |||||| |||||| ||| |||||||| Sbjct: 27181702 caggatttgctgaatgcttcttcttgtcctttcgtagctgctttatttcctgcactccct 27181643 Query: 342 gaaga 346 ||||| Sbjct: 27181642 gaaga 27181638 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgtatacaacgtttaaga 153 |||||||||| ||||| ||||||||||| |||||||||||| |||||||||| ||||||| Sbjct: 27181975 gtatgtttcctagatcgacacatgagacgtttgcgcagaagttgtatacaacatttaaga 27181916 Query: 154 ataacaagcgattcgtcaaaccagagctttcacgtacagactttacagtcgtccattatg 213 ||||||| || || | |||||| |||||||||| ||||| |||||| | || ||||||| Sbjct: 27181915 ataacaaacggtttgccaaaccgaagctttcacgcacagattttacaattgttcattatg 27181856 Query: 214 ccggcgatgt 223 | || ||||| Sbjct: 27181855 ctggtgatgt 27181846 Score = 95.6 bits (48), Expect = 1e-16 Identities = 58/60 (96%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 1 ataaactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27183041 ataaactggagttacatagagtttgttgataatcaagatgtgttagacttgattgagaag 27182982 Score = 60.0 bits (30), Expect = 6e-06 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 225 acataccaggctgatca-tttcttagacaagaacaaagattatgtagtggcagaacatca 283 ||||| || |||||||| |||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 30567056 acatatcaagctgatcagtttctt-gacaagaacaaagactatgtggtggcagaacatca 30567114 Query: 284 gg 285 || Sbjct: 30567115 gg 30567116 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaa 58 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 30566480 tttgtggacaatcaagatgtgctggacttaattgagaa 30566517
>gb|U94784.1|U94784 Helianthus annuus unconventional myosin (hamy4) mRNA, complete cds Length = 5160 Score = 83.8 bits (42), Expect = 4e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 87 gaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctgtatacaacg 146 ||||| |||||||||||||||||||||||||| |||||||| || |||||||| ||| Sbjct: 1795 gaagcttgtatgtttcccagatcaacacatgaaacatttgcacaaaagctgtaccaaact 1854 Query: 147 tttaagaataacaagcgattcg 168 ||||||||| ||||||| |||| Sbjct: 1855 tttaagaatcacaagcgtttcg 1876
>ref|NM_191733.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4602 Score = 79.8 bits (40), Expect = 6e-12 Identities = 238/302 (78%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 4 aactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaagaaa 62 ||||||||| ||||||||||||| ||||| |||||||| || || ||||| ||||||||| Sbjct: 1441 aactggagttacatagagtttgtagataaccaagatgtacttgatttgatcgagaagaaa 1500 Query: 63 ---ggtggattgattgcgcttctggacgaagcatgtatgtttcccagatcaacacatgag 119 ||||| | ||||| ||||| || ||||| || ||||| || | || ||||| ||| Sbjct: 1501 ccaggtggcattattgcacttcttgatgaagcttgcatgttcccaaagtcgacacacgag 1560 Query: 120 acatttgcgcagaagctgtatacaacgtttaagaataacaagcgattcgtcaaaccagag 179 |||||| | ||||||||||| || ||| |||||| |||| |||| ||||||| | Sbjct: 1561 acattttcccagaagctgtacgaaaagttcaagaatcacaaaagatttaccaaaccaaaa 1620 Query: 180 ctttcacgtacagactttacagtcgtccattatgccggcgatgtgacataccaggctgat 239 ||||| ||||| | ||||| || |||||||| || ||||||| ||| || ||||| Sbjct: 1621 ctttctcgtactgcgtttactatccaacattatgctggagatgtgatatatcaatctgat 1680 Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgct 299 ||||| | ||||| ||||||||||| || || ||||| |||||||| || ||||||||| Sbjct: 1681 cattttctggacaaaaacaaagattacgtggtagcagagcatcaggaattactgaatgct 1740 Query: 300 tc 301 || Sbjct: 1741 tc 1742
>dbj|AK120774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008O03, full insert sequence Length = 4631 Score = 77.8 bits (39), Expect = 2e-11 Identities = 104/125 (83%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 18 gagtttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtggattgatt 74 ||||||||||||||||| ||||| || ||| | |||||||||||| ||||| | ||| Sbjct: 993 gagtttgttgataatcaggatgttcttgaccttattgagaagaaacctggtggtgttatt 1052 Query: 75 gcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaag 134 || ||||| || || |||||||||||||| | |||||||||||||| ||| | |||||| Sbjct: 1053 gcacttctagatgaggcatgtatgtttcctaagtcaacacatgagactttttcccagaag 1112 Query: 135 ctgta 139 ||||| Sbjct: 1113 ctgta 1117
>dbj|AK069690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A17, full insert sequence Length = 5229 Score = 77.8 bits (39), Expect = 2e-11 Identities = 104/125 (83%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 18 gagtttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtggattgatt 74 ||||||||||||||||| ||||| || ||| | |||||||||||| ||||| | ||| Sbjct: 1611 gagtttgttgataatcaggatgttcttgaccttattgagaagaaacctggtggtgttatt 1670 Query: 75 gcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaag 134 || ||||| || || |||||||||||||| | |||||||||||||| ||| | |||||| Sbjct: 1671 gcacttctagatgaggcatgtatgtttcctaagtcaacacatgagactttttcccagaag 1730 Query: 135 ctgta 139 ||||| Sbjct: 1731 ctgta 1735
>ref|XM_475779.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 7281 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 170 caaaccagagctttcacgtacagactttacagtcgtccattatgccggcgatgtgacata 229 ||||||| ||||||| ||||| | |||||| || |||||||| || || || ||||| Sbjct: 2484 caaaccaaagctttctcgtactgcatttacaatccaacattatgcaggagaagtaacata 2543 Query: 230 ccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcaggattt 289 ||| ||||||||||| | ||||| |||| |||||||||||| | ||||||||| || || Sbjct: 2544 tcagtctgatcatttcctggacaaaaacagagattatgtagtcgtagaacatcaagagtt 2603 Query: 290 gctgaatgcttc 301 ||| |||||||| Sbjct: 2604 gcttaatgcttc 2615 Score = 46.1 bits (23), Expect = 0.087 Identities = 56/67 (83%) Strand = Plus / Plus Query: 73 ttgcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcaga 132 |||| ||||| || ||||| ||||||||||| | || ||||||||| ||||| | |||| Sbjct: 2387 ttgcacttcttgatgaagcttgtatgtttcctaaatgtacacatgagtcattttctcaga 2446 Query: 133 agctgta 139 ||||||| Sbjct: 2447 agctgta 2453 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgtgctagacttgattga 55 |||||||| |||||||| || ||||| ||| | ||||||||||| Sbjct: 2149 tacatagaatttgttgacaaccaagacgtgttggacttgattga 2192
>ref|XM_469738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4644 Score = 67.9 bits (34), Expect = 2e-08 Identities = 84/98 (85%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 189 acagactttacagtcgtccattatgccggcgatgtgacataccaggctgatca-tttctt 247 |||| ||||||| || ||| ||||| || ||||| ||||| || |||||||| |||||| Sbjct: 1627 acagcctttacaatcaaccactatgcaggagatgtcacatatcaagctgatcagtttctt 1686 Query: 248 agacaagaacaaagattatgtagtggcagaacatcagg 285 |||||||||||||| ||||| |||||||||||||||| Sbjct: 1687 -gacaagaacaaagactatgtggtggcagaacatcagg 1723 Score = 58.0 bits (29), Expect = 2e-05 Identities = 100/123 (81%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtggattgattgcg 77 ||||| || |||||||||||||| ||||| |||||||| ||| || ||| | ||||| Sbjct: 1456 tttgtggacaatcaagatgtgctggacttaattgagaaaaaacctggaggaataattgca 1515 Query: 78 cttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctg 137 || ||||| |||||||| |||||||| | || |||||||| |||||||| || ||| || Sbjct: 1516 ctactggatgaagcatgcatgtttccaaagtccacacatgaaacatttgcccaaaagatg 1575 Query: 138 tat 140 ||| Sbjct: 1576 tat 1578
>gb|AY374517.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E3 protein (MyoXIE3) mRNA, complete cds Length = 5307 Score = 67.9 bits (34), Expect = 2e-08 Identities = 84/98 (85%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 189 acagactttacagtcgtccattatgccggcgatgtgacataccaggctgatca-tttctt 247 |||| ||||||| || ||| ||||| || ||||| ||||| || |||||||| |||||| Sbjct: 1627 acagcctttacaatcaaccactatgcaggagatgtcacatatcaagctgatcagtttctt 1686 Query: 248 agacaagaacaaagattatgtagtggcagaacatcagg 285 |||||||||||||| ||||| |||||||||||||||| Sbjct: 1687 -gacaagaacaaagactatgtggtggcagaacatcagg 1723 Score = 58.0 bits (29), Expect = 2e-05 Identities = 100/123 (81%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtggattgattgcg 77 ||||| || |||||||||||||| ||||| |||||||| ||| || ||| | ||||| Sbjct: 1456 tttgtggacaatcaagatgtgctggacttaattgagaaaaaacctggaggaataattgca 1515 Query: 78 cttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctg 137 || ||||| |||||||| |||||||| | || |||||||| |||||||| || ||| || Sbjct: 1516 ctactggatgaagcatgcatgtttccaaagtccacacatgaaacatttgcccaaaagatg 1575 Query: 138 tat 140 ||| Sbjct: 1576 tat 1578
>gb|AY374516.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E2 protein (MyoXIE2) mRNA, complete cds Length = 5348 Score = 67.9 bits (34), Expect = 2e-08 Identities = 84/98 (85%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 189 acagactttacagtcgtccattatgccggcgatgtgacataccaggctgatca-tttctt 247 |||| ||||||| || ||| ||||| || ||||| ||||| || |||||||| |||||| Sbjct: 1627 acagcctttacaatcaaccactatgcaggagatgtcacatatcaagctgatcagtttctt 1686 Query: 248 agacaagaacaaagattatgtagtggcagaacatcagg 285 |||||||||||||| ||||| |||||||||||||||| Sbjct: 1687 -gacaagaacaaagactatgtggtggcagaacatcagg 1723 Score = 50.1 bits (25), Expect = 0.006 Identities = 99/123 (80%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtggattgattgcg 77 ||||| || |||||||||||||| ||||| |||||||| ||| || ||| | ||||| Sbjct: 1456 tttgtggacaatcaagatgtgctggacttaattgagaaaaaacctggaggaataattgca 1515 Query: 78 cttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctg 137 || ||||| ||||| || |||||||| | || |||||||| |||||||| || ||| || Sbjct: 1516 ctactggatgaagcgtgcatgtttccaaagtccacacatgaaacatttgcccaaaagatg 1575 Query: 138 tat 140 ||| Sbjct: 1576 tat 1578
>gb|AY374515.1| Oryza sativa (japonica cultivar-group) myosin heavy chain class XI E1 protein (MyoXIE1) mRNA, complete cds Length = 5139 Score = 67.9 bits (34), Expect = 2e-08 Identities = 84/98 (85%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 189 acagactttacagtcgtccattatgccggcgatgtgacataccaggctgatca-tttctt 247 |||| ||||||| || ||| ||||| || ||||| ||||| || |||||||| |||||| Sbjct: 1627 acagcctttacaatcaaccactatgcaggagatgtcacatatcaagctgatcagtttctt 1686 Query: 248 agacaagaacaaagattatgtagtggcagaacatcagg 285 |||||||||||||| ||||| |||||||||||||||| Sbjct: 1687 -gacaagaacaaagactatgtggtggcagaacatcagg 1723 Score = 50.1 bits (25), Expect = 0.006 Identities = 99/123 (80%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtggattgattgcg 77 ||||| || |||||||||||||| ||||| |||||||| ||| || ||| | ||||| Sbjct: 1456 tttgtggacaatcaagatgtgctggacttaattgagaaaaaacctggaggaataattgca 1515 Query: 78 cttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctg 137 || ||||| ||||| || |||||||| | || |||||||| |||||||| || ||| || Sbjct: 1516 ctactggatgaagcgtgcatgtttccaaagtccacacatgaaacatttgcccaaaagatg 1575 Query: 138 tat 140 ||| Sbjct: 1576 tat 1578
>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01, complete sequence Length = 144395 Score = 65.9 bits (33), Expect = 9e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 225 acataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcag 284 ||||| ||| ||||||||||| | ||||| |||| |||||||||||| | ||||||||| Sbjct: 378 acatatcagtctgatcatttcctggacaaaaacagagattatgtagtcgtagaacatcaa 437 Query: 285 gatttgctgaatgcttc 301 || ||||| |||||||| Sbjct: 438 gagttgcttaatgcttc 454
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 65.9 bits (33), Expect = 9e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 225 acataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcag 284 ||||| ||| ||||||||||| | ||||| |||| |||||||||||| | ||||||||| Sbjct: 131594 acatatcagtctgatcatttcctggacaaaaacagagattatgtagtcgtagaacatcaa 131653 Query: 285 gatttgctgaatgcttc 301 || ||||| |||||||| Sbjct: 131654 gagttgcttaatgcttc 131670 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgtgctagacttgattga 55 |||||||| |||||||| || ||||| ||| | ||||||||||| Sbjct: 128829 tacatagaatttgttgacaaccaagacgtgttggacttgattga 128872
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 9e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 225 acataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcag 284 ||||| ||| ||||||||||| | ||||| |||| |||||||||||| | ||||||||| Sbjct: 26486903 acatatcagtctgatcatttcctggacaaaaacagagattatgtagtcgtagaacatcaa 26486962 Query: 285 gatttgctgaatgcttc 301 || ||||| |||||||| Sbjct: 26486963 gagttgcttaatgcttc 26486979 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgtgctagacttgattga 55 |||||||| |||||||| || ||||| ||| | ||||||||||| Sbjct: 26484138 tacatagaatttgttgacaaccaagacgtgttggacttgattga 26484181
>ref|NM_128883.2| Arabidopsis thaliana XID; motor/ protein binding AT2G33240 (XID) mRNA, complete cds Length = 5313 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 186 cgtacagactttacagtcgtccattatgccggcgatgtgacataccaggctgatcatttc 245 |||||||||||||| || ||||||||| || ||||| || || ||| |||| | || Sbjct: 1672 cgtacagactttaccatctgccattatgctggtgatgtcacttatcagactgaactattt 1731 Query: 246 ttagacaagaacaaagattatgtagtggcagaacatca 283 ||||||||||||||||||||||| || | ||||||||| Sbjct: 1732 ttagacaagaacaaagattatgttgttggagaacatca 1769 Score = 58.0 bits (29), Expect = 2e-05 Identities = 97/119 (81%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtgga 68 ||||||||||| |||||||||||||||| || ||| | || || |||||| |||||| Sbjct: 1495 tacatagagttcattgataatcaagatgtccttgaccttatagaaaagaaacctggtgga 1554 Query: 69 ttgattgcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgc 127 | ||||| ||||| || || || |||||||| || |||||||||||||| ||| |||| Sbjct: 1555 attattgctcttcttgatgaggcttgtatgttcccaagatcaacacatgatacacttgc 1613
>ref|NM_100297.2| Arabidopsis thaliana XIB AT1G04160 (XIB) mRNA, complete cds Length = 4503 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 72 attgcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcag 131 ||||| ||||| || ||||| || |||||||| ||||||||||| ||||||||||| ||| Sbjct: 1513 attgctcttctagatgaagcttgcatgtttcctagatcaacacacgagacatttgctcag 1572 Query: 132 aa 133 || Sbjct: 1573 aa 1574
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 60.0 bits (30), Expect = 6e-06 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Minus Query: 225 acataccaggctgatca-tttcttagacaagaacaaagattatgtagtggcagaacatca 283 ||||| || |||||||| |||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 1381 acatatcaagctgatcagtttctt-gacaagaacaaagactatgtggtggcagaacatca 1323 Query: 284 gg 285 || Sbjct: 1322 gg 1321 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaa 58 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 1957 tttgtggacaatcaagatgtgctggacttaattgagaa 1920
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 60.0 bits (30), Expect = 6e-06 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 225 acataccaggctgatca-tttcttagacaagaacaaagattatgtagtggcagaacatca 283 ||||| || |||||||| |||||| |||||||||||||| ||||| |||||||||||||| Sbjct: 7207 acatatcaagctgatcagtttctt-gacaagaacaaagactatgtggtggcagaacatca 7265 Query: 284 gg 285 || Sbjct: 7266 gg 7267 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 21 tttgttgataatcaagatgtgctagacttgattgagaa 58 ||||| || |||||||||||||| ||||| |||||||| Sbjct: 6631 tttgtggacaatcaagatgtgctggacttaattgagaa 6668
>gb|U94785.1|U94785 Helianthus annuus unconventional myosin (hamy5) mRNA, complete cds Length = 5228 Score = 60.0 bits (30), Expect = 6e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgcttcatcatgt 308 ||||| |||||||||||||| |||||||||||||| ||||| || | ||| ||| |||| Sbjct: 1892 gacaaaaacaaagattatgtggtggcagaacatcaagatttactaactgcctcaaaatgt 1951 Query: 309 ccttttgtagctagtttattcccttcactccctg 342 || ||||| | | ||||||| ||| |||| |||| Sbjct: 1952 ccctttgtcgttggtttatttcctccacttcctg 1985
>ref|NM_100339.1| Arabidopsis thaliana XIA; motor/ protein binding AT1G04600 (XIA) mRNA, complete cds Length = 5193 Score = 58.0 bits (29), Expect = 2e-05 Identities = 106/131 (80%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgtgctagacttgattgagaagaaa---ggtgga 68 ||||||||||| |||||||||| ||||| || || | ||||| |||||| ||||| Sbjct: 1444 tacatagagttcattgataatcaggatgtccttgatcttattgaaaagaaacctggtggt 1503 Query: 69 ttgattgcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcg 128 | ||||| ||||| ||||| || || |||||||| |||||||||||||| ||||| || Sbjct: 1504 atcattgcccttctagacgaggcttgcatgtttccaagatcaacacatgatacattcgct 1563 Query: 129 cagaagctgta 139 || |||||||| Sbjct: 1564 caaaagctgta 1574 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatca 283 |||||||||||||||||||| || | ||||||||| Sbjct: 1684 gacaagaacaaagattatgttgttggagaacatca 1718
>ref|NM_122056.3| Arabidopsis thaliana XIK; motor/ protein binding AT5G20490 (XIK) mRNA, complete cds Length = 5079 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 72 attgcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcag 131 ||||| ||||| || || |||||||||||||| | || |||||||| |||||||| ||| Sbjct: 1552 attgcacttctagatgaggcatgtatgtttccgaagtcgacacatgaaacatttgctcag 1611 Query: 132 aagctgtat 140 ||||||||| Sbjct: 1612 aagctgtat 1620 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Plus Query: 252 aagaacaaagattatgtagtggcagaacatcaggat 287 ||||| |||||||| || |||||||||||||||||| Sbjct: 1732 aagaataaagattacgtggtggcagaacatcaggat 1767
>ref|XM_468404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4587 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||||||||| || |||||||||| Sbjct: 1741 gacaagaacaaagattatgtagttgctgaacatcagg 1777 Score = 48.1 bits (24), Expect = 0.022 Identities = 71/86 (82%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 51 attgagaagaaa---ggtggattgattgcgcttctggacgaagcatgtatgtttcccaga 107 |||||||||||| |||||| | ||||| ||||| || || || |||||| | || ||| Sbjct: 1540 attgagaagaaacccggtggaattattgcccttctagatgaggcctgtatgctgccaaga 1599 Query: 108 tcaacacatgagacatttgcgcagaa 133 |||||||| ||||||||||| ||||| Sbjct: 1600 tcaacacacgagacatttgctcagaa 1625
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||||||||| || |||||||||| Sbjct: 35050489 gacaagaacaaagattatgtagttgctgaacatcagg 35050525 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 agatcaacacatgagacatttgcgcagaa 133 ||||||||||| ||||||||||| ||||| Sbjct: 35050265 agatcaacacacgagacatttgctcagaa 35050293
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||||||||| || |||||||||| Sbjct: 110830 gacaagaacaaagattatgtagttgctgaacatcagg 110866 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 agatcaacacatgagacatttgcgcagaa 133 ||||||||||| ||||||||||| ||||| Sbjct: 110606 agatcaacacacgagacatttgctcagaa 110634
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||||||||| || |||||||||| Sbjct: 23652 gacaagaacaaagattatgtagttgctgaacatcagg 23688 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 agatcaacacatgagacatttgcgcagaa 133 ||||||||||| ||||||||||| ||||| Sbjct: 23428 agatcaacacacgagacatttgctcagaa 23456
>dbj|AK122154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145D02, full insert sequence Length = 4208 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||||||||| || |||||||||| Sbjct: 965 gacaagaacaaagattatgtagttgctgaacatcagg 1001 Score = 56.0 bits (28), Expect = 9e-05 Identities = 72/86 (83%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 51 attgagaagaaa---ggtggattgattgcgcttctggacgaagcatgtatgtttcccaga 107 |||||||||||| |||||| | ||||| ||||| || || || |||||||| || ||| Sbjct: 764 attgagaagaaacccggtggaattattgcccttctagatgaggcctgtatgttgccgaga 823 Query: 108 tcaacacatgagacatttgcgcagaa 133 |||||||| ||||||||||| ||||| Sbjct: 824 tcaacacacgagacatttgctcagaa 849
>gb|AY907549.1| Oryza sativa (japonica cultivar-group) myosin XI B (MyoXIB) mRNA, complete cds Length = 5216 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||||||||| || |||||||||| Sbjct: 1964 gacaagaacaaagattatgtagttgctgaacatcagg 2000 Score = 48.1 bits (24), Expect = 0.022 Identities = 71/86 (82%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 51 attgagaagaaa---ggtggattgattgcgcttctggacgaagcatgtatgtttcccaga 107 |||||||||||| |||||| | ||||| ||||| || || || |||||| | || ||| Sbjct: 1763 attgagaagaaacccggtggaattattgcccttctagatgaggcctgtatgctgccaaga 1822 Query: 108 tcaacacatgagacatttgcgcagaa 133 |||||||| ||||||||||| ||||| Sbjct: 1823 tcaacacacgagacatttgctcagaa 1848
>ref|NM_127588.2| Arabidopsis thaliana XIG; motor/ protein binding AT2G20290 (XIG) mRNA, complete cds Length = 4482 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 72 attgcgcttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcag 131 ||||| ||||||||||| || || ||||| || |||||||||||| | |||||| | ||| Sbjct: 1537 attgcacttctggacgaggcttgcatgttcccaagatcaacacataaaacattttctcag 1596 Query: 132 aagctgta 139 |||||||| Sbjct: 1597 aagctgta 1604 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 aagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||| || ||||| ||||||| Sbjct: 1717 aagaacaaagattatgttgttgcagagcatcagg 1750
>ref|NM_115678.1| Arabidopsis thaliana XIJ AT3G58160 (XIJ) mRNA, complete cds Length = 3729 Score = 56.0 bits (28), Expect = 9e-05 Identities = 91/112 (81%) Strand = Plus / Plus Query: 190 cagactttacagtcgtccattatgccggcgatgtgacataccaggctgatcatttcttag 249 |||| |||||| | || |||||||| || ||||| ||||||| | ||||| || |||| Sbjct: 1622 cagattttacattagttcattatgcaggggatgtccaataccagtccgatcaatttttag 1681 Query: 250 acaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgcttc 301 |||| |||||||| ||||| || || || |||||||||||| | |||||||| Sbjct: 1682 acaaaaacaaagactatgttgtcgccgagcatcaggatttgttaaatgcttc 1733
>emb|Z34294.1|ATMYOS3 A.thaliana (C1A) myosin heavy chain mRNA Length = 3219 Score = 56.0 bits (28), Expect = 9e-05 Identities = 91/112 (81%) Strand = Plus / Plus Query: 190 cagactttacagtcgtccattatgccggcgatgtgacataccaggctgatcatttcttag 249 |||| |||||| | || |||||||| || ||||| ||||||| | ||||| || |||| Sbjct: 787 cagattttacattagttcattatgcaggggatgtccaataccagtccgatcaatttttag 846 Query: 250 acaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgcttc 301 |||| |||||||| ||||| || || || |||||||||||| | |||||||| Sbjct: 847 acaaaaacaaagactatgttgtcgccgagcatcaggatttgttaaatgcttc 898
>gb|AF233886.1|AF233886 Vallisneria gigantea unconventional myosin XI mRNA, complete cds Length = 5116 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 78 cttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaa 133 ||||| |||||||| ||||||||||| || ||||| ||||| |||||||| ||||| Sbjct: 1878 cttcttgacgaagcttgtatgtttccaaggtcaactcatgaaacatttgctcagaa 1933
>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24 Length = 105306 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 227 ataccaggctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcagga 286 ||||||| | ||||| || |||||||| |||||||| ||||| || || || |||||||| Sbjct: 36798 ataccagtccgatcaatttttagacaaaaacaaagactatgttgtcgccgagcatcagga 36857 Query: 287 tttgctgaatgcttc 301 |||| | |||||||| Sbjct: 36858 tttgttaaatgcttc 36872
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 235 ctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcaggatttgctga 294 |||||||||| | ||||| ||||||||||| || || ||||| |||||||| || |||| Sbjct: 29661245 ctgatcattttctggacaaaaacaaagattacgtggtagcagagcatcaggaattactga 29661186 Query: 295 atgcttc 301 ||||||| Sbjct: 29661185 atgcttc 29661179 Score = 50.1 bits (25), Expect = 0.006 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 4 aactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 ||||||||| ||||||||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 29663377 aactggagttacatagagtttgtagataaccaagatgtacttgatttgatcgagaag 29663321
>dbj|AP003410.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1142C05 Length = 151457 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 235 ctgatcatttcttagacaagaacaaagattatgtagtggcagaacatcaggatttgctga 294 |||||||||| | ||||| ||||||||||| || || ||||| |||||||| || |||| Sbjct: 131065 ctgatcattttctggacaaaaacaaagattacgtggtagcagagcatcaggaattactga 131006 Query: 295 atgcttc 301 ||||||| Sbjct: 131005 atgcttc 130999 Score = 50.1 bits (25), Expect = 0.006 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 4 aactggagt-acatagagtttgttgataatcaagatgtgctagacttgattgagaag 59 ||||||||| ||||||||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 133197 aactggagttacatagagtttgtagataaccaagatgtacttgatttgatcgagaag 133141
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 246 ttagacaagaacaaagattatgtagtggcagaacatca 283 ||||||||||||||||||||||| || | ||||||||| Sbjct: 7188 ttagacaagaacaaagattatgttgttggagaacatca 7225 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgt 40 ||||||||||| |||||||||||||||| Sbjct: 6647 tacatagagttcattgataatcaagatgt 6675
>gb|AY109458.1| Zea mays CL1510_1 mRNA sequence Length = 4313 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgcttca 302 |||||||||||||||||||| || || || ||||||| |||| ||| ||||||| Sbjct: 1201 gacaagaacaaagattatgttgttgctgagcatcaggctttgttgagtgcttca 1254
>gb|AF147739.1|AF147739 Zea mays myosin XI (M2) mRNA, partial cds Length = 4313 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcaggatttgctgaatgcttca 302 |||||||||||||||||||| || || || ||||||| |||| ||| ||||||| Sbjct: 1201 gacaagaacaaagattatgttgttgctgagcatcaggctttgttgagtgcttca 1254
>gb|AC002411.1|F20D22 Arabidopsis thaliana chromosome 1 BAC F20D22 sequence, complete sequence Length = 78259 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 96 atgtttcccagatcaacacatgagacatttgcgcagaa 133 |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 35309 atgtttcctagatcaacacacgagacatttgctcagaa 35272
>gb|U94782.1|U94782 Helianthus annuus unconventional myosin (hamy2) mRNA, partial cds Length = 4059 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 15 atagagtttgttgataatcaagatgt 40 |||||||||||||||||||||||||| Sbjct: 1729 atagagtttgttgataatcaagatgt 1754
>gb|AF338254.1|AF338254 Petroselinum crispum myosin subfamily XI heavy chain (PCM3) mRNA, complete cds Length = 4935 Score = 50.1 bits (25), Expect = 0.006 Identities = 64/77 (83%) Strand = Plus / Plus Query: 78 cttctggacgaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctg 137 ||||| || ||||| || |||||||| || ||||||||||| |||||||| || ||||| Sbjct: 1647 cttctcgatgaagcttgcatgtttccaaggtcaacacatgaaacatttgcccaaaagctc 1706 Query: 138 tatacaacgtttaagaa 154 || |||||||||||| Sbjct: 1707 taccaaacgtttaagaa 1723
>ref|NM_128748.2| Arabidopsis thaliana XIF AT2G31900 (XIF) mRNA, complete cds Length = 4671 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcaggatttgct 292 ||||| ||||| |||||||| |||||||||||||| | |||||| Sbjct: 1687 gacaaaaacaaggattatgttgtggcagaacatcaagctttgct 1730
>ref|NM_101620.2| Arabidopsis thaliana MYA1; motor/ protein binding AT1G17580 (MYA1) mRNA, complete cds Length = 4960 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatca 283 |||||| | |||||||||||||||||| |||| || |||||||| Sbjct: 1819 catttcatcgacaagaacaaagattatatagttgctgaacatca 1862 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgt 40 |||||||||||| ||||||| |||||||| Sbjct: 1588 tacatagagtttattgataaccaagatgt 1616
>gb|AC135798.31| Medicago truncatula clone mth2-31c16, complete sequence Length = 123159 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 252 aagaacaaagattatgtagtggcagaacatca 283 ||||||||||||||||| || ||||||||||| Sbjct: 118636 aagaacaaagattatgttgttgcagaacatca 118667
>emb|Z28389.1|ATMYOSIN A.thaliana mRNA for myosin Length = 4924 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatca 283 |||||| | |||||||||||||||||| |||| || |||||||| Sbjct: 1819 catttcatcgacaagaacaaagattatatagttgctgaacatca 1862 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgt 40 |||||||||||| ||||||| |||||||| Sbjct: 1588 tacatagagtttattgataaccaagatgt 1616
>gb|AC006533.8| Arabidopsis thaliana chromosome 2 clone F20M17 map nga361, complete sequence Length = 100665 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgtagtggcagaacatcaggatttgct 292 ||||| ||||| |||||||| |||||||||||||| | |||||| Sbjct: 20006 gacaaaaacaaggattatgttgtggcagaacatcaagctttgct 20049
>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 Length = 70169 Score = 48.1 bits (24), Expect = 0.022 Identities = 33/36 (91%) Strand = Plus / Minus Query: 252 aagaacaaagattatgtagtggcagaacatcaggat 287 ||||| |||||||| || |||||||||||||||||| Sbjct: 35853 aagaataaagattacgtggtggcagaacatcaggat 35818 Score = 46.1 bits (23), Expect = 0.087 Identities = 41/47 (87%) Strand = Plus / Minus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgtat 140 |||||||||| | || |||||||| |||||||| |||||||||||| Sbjct: 36086 gtatgtttccgaagtcgacacatgaaacatttgctcagaagctgtat 36040
>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete sequence Length = 98950 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatca 283 |||||| | |||||||||||||||||| |||| || |||||||| Sbjct: 23487 catttcatcgacaagaacaaagattatatagttgctgaacatca 23530 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgt 40 |||||||||||| ||||||| |||||||| Sbjct: 22927 tacatagagtttattgataaccaagatgt 22955
>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I, complete sequence Length = 127968 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 240 catttcttagacaagaacaaagattatgtagtggcagaacatca 283 |||||| | |||||||||||||||||| |||| || |||||||| Sbjct: 97468 catttcatcgacaagaacaaagattatatagttgctgaacatca 97511 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 12 tacatagagtttgttgataatcaagatgt 40 |||||||||||| ||||||| |||||||| Sbjct: 96908 tacatagagtttattgataaccaagatgt 96936
>gb|AC155884.2| Medicago truncatula chromosome 2 BAC clone mth2-10d10, complete sequence Length = 79222 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 252 aagaacaaagattatgtagtggcagaacatca 283 ||||||||||||||||| || ||||||||||| Sbjct: 2827 aagaacaaagattatgttgttgcagaacatca 2858
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 96 atgtttcccagatcaacacatgagacatttgcgcagaagctgta 139 |||||||| |||||||||||||| ||||| || || |||||||| Sbjct: 67467 atgtttccaagatcaacacatgatacattcgctcaaaagctgta 67424 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Minus Query: 249 gacaagaacaaagattatgtagtggcagaacatca 283 |||||||||||||||||||| || | ||||||||| Sbjct: 67232 gacaagaacaaagattatgttgttggagaacatca 67198
>gb|AC146681.23| Medicago truncatula clone mth2-77o10, complete sequence Length = 130952 Score = 46.1 bits (23), Expect = 0.087 Identities = 41/47 (87%) Strand = Plus / Plus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgtat 140 |||||||||| |||||||||||||| || ||| | || ||||||||| Sbjct: 3260 gtatgtttcctagatcaacacatgaaactttttcccaaaagctgtat 3306 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgt 268 |||||||||||||||||||| Sbjct: 3527 gacaagaacaaagattatgt 3546
>gb|AC133341.11| Medicago truncatula clone mth2-28i3, complete sequence Length = 138850 Score = 46.1 bits (23), Expect = 0.087 Identities = 41/47 (87%) Strand = Plus / Plus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgtat 140 |||||||||| |||||||||||||| || ||| | || ||||||||| Sbjct: 112950 gtatgtttcctagatcaacacatgaaactttttcccaaaagctgtat 112996 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgt 268 |||||||||||||||||||| Sbjct: 113217 gacaagaacaaagattatgt 113236
>gb|AC006569.5| Arabidopsis thaliana chromosome 2 clone F11A3 map mi148, complete sequence Length = 93868 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 aagaacaaagattatgtagtggcagaacatcagg 285 ||||||||||||||||| || ||||| ||||||| Sbjct: 63517 aagaacaaagattatgttgttgcagagcatcagg 63550 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 96 atgtttcccagatcaacacatgagacatttgcgcagaagctgta 139 ||||| || |||||||||||| | |||||| | ||||||||||| Sbjct: 63262 atgttcccaagatcaacacataaaacattttctcagaagctgta 63305
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/46 (86%) Strand = Plus / Plus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgta 139 |||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 16559867 gtatgtttcctaagtcaacacatgagactttttcccagaagctgta 16559912 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 18 gagtttgttgataatcaagatgtgctagacttgattgagaag 59 ||||||||||||||||| ||||| || ||| | ||||||||| Sbjct: 16558955 gagtttgttgataatcaggatgttcttgaccttattgagaag 16558996
>dbj|AB180675.1| Nicotiana tabacum Ntmy170 mRNA for myosin XI, complete cds Length = 5144 Score = 44.1 bits (22), Expect = 0.34 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 aagaacaaagattatgtagtggcagaacatcagg 285 ||||| ||||||||||| || ||||||||||||| Sbjct: 1784 aagaataaagattatgtggttgcagaacatcagg 1817 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 87 gaagcatgtatgtttcccagatcaacacatgagacatttgcgcagaagctgta 139 ||||| ||||||||||| | ||| || ||||| |||||||| |||||| |||| Sbjct: 1619 gaagcctgtatgtttcctaaatctactcatgaaacatttgctcagaagttgta 1671 Score = 42.1 bits (21), Expect = 1.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 4 aactggag-tacatagagtttgttgataatcaagatgtgct 43 |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 1532 aactggagctacatagagtttgttgacaaccaagacgtgct 1572
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/46 (86%) Strand = Plus / Plus Query: 94 gtatgtttcccagatcaacacatgagacatttgcgcagaagctgta 139 |||||||||| | |||||||||||||| ||| | ||||||||||| Sbjct: 55847 gtatgtttcctaagtcaacacatgagactttttcccagaagctgta 55892 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 18 gagtttgttgataatcaagatgtgctagacttgattgagaag 59 ||||||||||||||||| ||||| || ||| | ||||||||| Sbjct: 54935 gagtttgttgataatcaggatgttcttgaccttattgagaag 54976
>dbj|AB185287.1| Adiantum capillus-veneris myo11-1 mRNA for myosin class 11-1, complete cds Length = 4620 Score = 42.1 bits (21), Expect = 1.4 Identities = 63/77 (81%) Strand = Plus / Plus Query: 207 cattatgccggcgatgtgacataccaggctgatcatttcttagacaagaacaaagattat 266 ||||||||||| || || || |||||||| |||| ||| | |||||||| || |||||| Sbjct: 1642 cattatgccggtgaggtcacttaccaggcagatctcttccttgacaagaataaggattat 1701 Query: 267 gtagtggcagaacatca 283 || || || |||||||| Sbjct: 1702 gttgttgctgaacatca 1718
>ref|NM_186249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 cagaacatcaggatttgctg 293 |||||||||||||||||||| Sbjct: 1673 cagaacatcaggatttgctg 1654
>ref|NM_186248.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3974 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagaacatcaggatttgctg 293 |||||||||||||||||||| Sbjct: 3470 cagaacatcaggatttgctg 3489
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gacaagaacaaagattatgt 268 |||||||||||||||||||| Sbjct: 1018894 gacaagaacaaagattatgt 1018875
>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence Length = 135214 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 atgcttcatcatgtcctttt 314 |||||||||||||||||||| Sbjct: 120733 atgcttcatcatgtcctttt 120714
>ref|XM_573028.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNI03820) partial mRNA Length = 6354 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gacaagaacaaagattatgt 268 |||||||||||||||||||| Sbjct: 5521 gacaagaacaaagattatgt 5540
>gb|AC122470.3| Mus musculus BAC clone RP24-320O6 from chromosome 18, complete sequence Length = 190916 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tagacaagaacaaagattat 266 |||||||||||||||||||| Sbjct: 139882 tagacaagaacaaagattat 139863
>emb|CR931730.1| Medicago truncatula chromosome 5 clone mth2-17o15, COMPLETE SEQUENCE Length = 89342 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tgaagaatcatcaaagtctt 360 |||||||||||||||||||| Sbjct: 17162 tgaagaatcatcaaagtctt 17181
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagaacatcaggatttgctg 293 |||||||||||||||||||| Sbjct: 2183447 cagaacatcaggatttgctg 2183466
>gb|AC007877.3| Homo sapiens BAC clone RP11-206M19 from 2, complete sequence Length = 145331 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tgcttcatcatgtccttttg 315 |||||||||||||||||||| Sbjct: 93618 tgcttcatcatgtccttttg 93599
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 ctccctgaagaatcatcaaagtct 359 |||| ||||||||||||||||||| Sbjct: 1485947 ctccatgaagaatcatcaaagtct 1485970
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagaacatcaggatttgctg 293 |||||||||||||||||||| Sbjct: 51349 cagaacatcaggatttgctg 51368
>dbj|AK103156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121A14, full insert sequence Length = 3974 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 cagaacatcaggatttgctg 293 |||||||||||||||||||| Sbjct: 3470 cagaacatcaggatttgctg 3489
>gb|AC004395.1|AC004395 Emericella nidulans Chromosome VIII Cosmid Clone 30b1, complete sequence Length = 37312 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 catgagacatttgcgcagaa 133 |||||||||||||||||||| Sbjct: 32564 catgagacatttgcgcagaa 32545
>gb|AC005299.1|AC005299 emericella nidulans chromosome viii cosmid 2h2 containing spermidine synthase, complete sequence Length = 40554 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 catgagacatttgcgcagaa 133 |||||||||||||||||||| Sbjct: 305 catgagacatttgcgcagaa 324
>gb|AC151578.1| Mus musculus BAC clone RP23-218K4 from 18, complete sequence Length = 192387 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 tagacaagaacaaagattat 266 |||||||||||||||||||| Sbjct: 120430 tagacaagaacaaagattat 120449 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,496,261 Number of Sequences: 3902068 Number of extensions: 3496261 Number of successful extensions: 59958 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59618 Number of HSP's gapped (non-prelim): 336 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
