>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Hyperpolarization-activated
           cation channel 4) (HAC-4)
          Length = 1175

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +2

Query: 23  GTLAPPPCGHPKPPRSHGRQRRGRPQVARDGGRDIGAEALP 145
           G  APP    P+ P S G QR     V  +GG   G + LP
Sbjct: 163 GAPAPPAASPPQVPSSCGEQRPADAAVKVEGGAAAGDQILP 203

>POMT2_HUMAN (Q9UKY4) Protein O-mannosyl-transferase 2 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           2)
          Length = 750

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 38  PPCGHPKPPRSHGRQRRGR--PQVARDGGRDIGAEAL 142
           PP        S  R RRGR  PQ AR  GRD+ AEA+
Sbjct: 2   PPATGGGLAESELRPRRGRCGPQAARAAGRDVAAEAV 38

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = +2

Query: 11  VSNAGTLAPPPCG-----HPKPPRSHGRQRRGRPQVARDGGRDIGAEALP 145
           ++N  T  PPP G     +P PP  HG  + G P      G+  GA+  P
Sbjct: 607 MNNMATPPPPPQGAAGGGYPMPPHMHGGYKMGGP------GQSPGAQGYP 650

>TRPB2_MAIZE (P43284) Tryptophan synthase beta chain 2, chloroplast precursor|
           (EC 4.2.1.20) (Orange pericarp 2) (Fragment)
          Length = 443

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +2

Query: 53  PKPPRSHGRQRRGRPQVARDGGRDIGAEALP 145
           P PP   GR+RRGR + A   G+ + AEA P
Sbjct: 3   PPPPAPEGRRRRGRGRNA--AGQAVAAEASP 31

>FOXI1_HUMAN (Q12951) Forkhead box protein I1 (Forkhead-related protein FKHL10)|
           (Forkhead-related transcription factor 6) (FREAC-6)
           (Hepatocyte nuclear factor 3 forkhead homolog 3)
           (HNF-3/fork-head homolog 3) (HFH-3)
          Length = 351

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 17  NAGTLAPPPC-----GHPKPPRSHGRQRRGRPQVARDGGRDIGAEALP 145
           N  T+ PPP        P  P+++G QR   P V+  GG D+G   +P
Sbjct: 39  NGPTMTPPPYLPGPNASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIP 86

>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
 Frame = +2

Query: 5   PNVSNAGTLAPPPCGHPKPPRSHGRQRRG----RPQVARDGGRDIGAEALP 145
           P+   +G L PPP   P PP      R G     P V+R+G       A P
Sbjct: 349 PSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATP 399

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 35  PPPCGHPKPPRSHGRQRRGRPQVARDGGRD 124
           P P G P+P      Q +GRP   RDG RD
Sbjct: 225 PRPGGGPRPGGGPRPQGQGRPGGQRDGQRD 254

>X92_TRYBB (P12304) Protein X92|
          Length = 549

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +2

Query: 5   PNVSNAGTLAPPPCGHPKPPRSHGRQRRG 91
           P VS +GT  P PC     PRS G++RRG
Sbjct: 450 PLVSLSGTRCPGPCSRRGWPRS-GKRRRG 477

>WN10A_HUMAN (Q9GZT5) Protein Wnt-10a precursor|
          Length = 417

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 5   PNVSNAGTLAPPPCGHPKP-PRSHGRQRRGRP 97
           P+  N G L P P G P P P + G +RR  P
Sbjct: 302 PHNRNGGQLEPGPAGAPSPAPGAPGPRRRASP 333

>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
           (Voltage-gated calcium channel alpha subunit Cav2.2)
           (Calcium channel, L type, alpha-1 polypeptide isoform 5)
           (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 53  PKPPRSHGRQRRGRPQVARDGGRDIGAE 136
           P+P RSH ++  G P+   + GR  G E
Sbjct: 886 PRPHRSHSKEAAGPPEARSERGRGPGPE 913

>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related|
           protein)
          Length = 440

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 35  PPPCGHPKPPRSHGRQRRGRPQVARDGGRDIGA 133
           PPP   P PP +  +    +P+++RD  R+ GA
Sbjct: 7   PPPPPGPPPPPTFNQANTEQPKLSRDEQRNRGA 39

>CEP35_HUMAN (Q5VT06) Centrosome-associated protein 350 (Centrosome-associated|
           protein of 350 kDa)
          Length = 3117

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 29  LAPPPCGHPKPPRSHGRQRRGRPQVARDGGRDIGAEALP 145
           L P P   PK  R+    R GR + A+ GG    AE+ P
Sbjct: 437 LGPAPRMEPKEQRTASSDRGGRERTAKSGGHIGRAESDP 475

>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor|
           (PRP-1/PRP-2) (Parotid proline-rich protein 1/2)
           (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa)
           (Parotid isoelectric focusing variant protein) (PIF-S)
           (Parotid double-band
          Length = 166

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +2

Query: 35  PPPCGHPK-PPR--SHGRQRRGRPQ-VARDGGRDIGAEALP 145
           PPP G P+ PP+   H R  RGRPQ   + GG   G    P
Sbjct: 102 PPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPP 142

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 41   PCGHPKPPRSHGRQ-RRGRPQVARDGGRD 124
            P GHP PP + G Q RRG P +    G D
Sbjct: 1107 PAGHPGPPGADGAQGRRGPPGLFGQKGDD 1135

>KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)|
          Length = 640

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 23  GTLAPPPCGHPKPPRSHGRQRRGRPQVARDGGRDI 127
           G  APPP   P P     R R+ RP    +G   +
Sbjct: 23  GPEAPPPPQPPAPEAERARPRQARPAAPMEGAMQL 57

>KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)|
          Length = 640

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = +2

Query: 23  GTLAPPPCGHPKPPRSHGRQRRGRPQVARDGGRDI 127
           G  APPP   P P     R R+ RP    +G   +
Sbjct: 23  GPEAPPPPQPPAPEAERARPRQARPAAPMEGAMQL 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,527,159
Number of Sequences: 219361
Number of extensions: 367171
Number of successful extensions: 2085
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)