>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
 Frame = -1

Query: 155 RARPPRPDP---------HG-HGAAWSGRTPWHPDPGTK 69
           R +PP PDP         HG H AA +GR P  P PG++
Sbjct: 651 RRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSE 689

>SPT5H_CHICK (Q5ZI08) Transcription elongation factor SPT5 (DRB|
           sensitivity-inducing factor large subunit) (DSIF large
           subunit)
          Length = 1079

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 143 PRPDPHGHGAAWSGRTPWHPDPGTKQ 66
           P P P G+G   + +TP +PDP + Q
Sbjct: 836 PTPSPQGYGGTPNPQTPGYPDPSSPQ 861

>ZN553_HUMAN (Q96MX3) Zinc finger protein 553|
          Length = 618

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
 Frame = -3

Query: 129 PRPRGSLEWPH------PMAPRPRHQAKQFENLNVGDCGWCG 22
           P P  +L  PH      PMAPRPR +A+         CG+CG
Sbjct: 508 PPPPSTLLRPHNPPGPVPMAPRPRVRAQPSGPSQPHVCGFCG 549

>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)|
          Length = 485

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 143 PRPDPHGHGAAWSGRTPWHPDP 78
           PRP P G G  WS R P  P P
Sbjct: 107 PRPPPPGPGPPWSPRWPEAPPP 128

>HNF4A_HUMAN (P41235) Hepatocyte nuclear factor 4-alpha (HNF-4-alpha)|
           (Transcription factor HNF-4) (Transcription factor 14)
          Length = 465

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 16  PYPTPPAITNVEVFKLFCLVPGSGCHGVRPLQAAPWP 126
           P P+PP  +  E +KL   +PG+    V+PL A P P
Sbjct: 424 PQPSPPGGSGSEPYKL---LPGAVATIVKPLSAIPQP 457

>GLUQ_NEIMA (Q9JST9) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)|
          Length = 295

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
 Frame = -1

Query: 191 EWRRPAAR-------SGRCRARPPRPDPHGHGAAWSGRTP 93
           +W+  A R       +GRCR    RP P G   AW  R P
Sbjct: 103 DWQTGARRGADGFVYNGRCRNPQQRPAPQGKQPAWRIRVP 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,332,513
Number of Sequences: 219361
Number of extensions: 738497
Number of successful extensions: 2990
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)