Clone Name | bastl50e08 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_483684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2814 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 139 cgcggcggtcgcgctctgcagcgaccgctccgcgctgctggccgacgccattcgcca 195 |||||| || ||||| ||| | |||||| |||||||||||||||||||||| ||||| Sbjct: 393 cgcggctgtggcgctgtgccgggaccgcgccgcgctgctggccgacgccatccgcca 449 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 380 gacgatgacgacggcggccacatacgcttccactcggacgacgaagacg 428 ||||| |||| |||||||||||||| |||| ||| |||||||| |||| Sbjct: 676 gacgacgacggcggcggccacatacatttcccctccgacgacgacgacg 724
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 139 cgcggcggtcgcgctctgcagcgaccgctccgcgctgctggccgacgccattcgcca 195 |||||| |||||||| ||| | |||||| || ||||||||||||||||||| ||||| Sbjct: 20185106 cgcggccgtcgcgctgtgccgggaccgcgccccgctgctggccgacgccatccgcca 20185050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagcc 303 ||||||||||||||||||||| Sbjct: 9058249 gccgccgccgccgctcgagcc 9058229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 6131380 ctgcagccgccgccgccgct 6131361
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 139 cgcggcggtcgcgctctgcagcgaccgctccgcgctgctggccgacgccattcgcca 195 |||||| || ||||| ||| | |||||| |||||||||||||||||||||| ||||| Sbjct: 27627787 cgcggctgtggcgctgtgccgggaccgcgccgcgctgctggccgacgccatccgcca 27627843 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 380 gacgatgacgacggcggccacatacgcttccactcggacgacgaagacg 428 ||||| |||| |||||||||||||| |||| ||| |||||||| |||| Sbjct: 27628070 gacgacgacggcggcggccacatacatttcccctccgacgacgacgacg 27628118 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagccgccgccgccgctcg 299 |||||||||||||||||||| Sbjct: 18244856 gcagccgccgccgccgctcg 18244875
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 139 cgcggcggtcgcgctctgcagcgaccgctccgcgctgctggccgacgccattcgcca 195 |||||| || ||||| ||| | |||||| |||||||||||||||||||||| ||||| Sbjct: 25131 cgcggctgtggcgctgtgccgggaccgcgccgcgctgctggccgacgccatccgcca 25187 Score = 42.1 bits (21), Expect = 1.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 380 gacgatgacgacggcggccacatacgcttccactcggacgacgaagacg 428 ||||| |||| |||||||||||||| |||| ||| |||||||| |||| Sbjct: 25414 gacgacgacggcggcggccacatacatttcccctccgacgacgacgacg 25462
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 139 cgcggcggtcgcgctctgcagcgaccgctccgcgctgctggccgacgccattcgcca 195 |||||| |||||||| ||| | |||||| || ||||||||||||||||||| ||||| Sbjct: 78606 cgcggccgtcgcgctgtgccgggaccgcgccccgctgctggccgacgccatccgcca 78550
>dbj|AK119967.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-D11, full insert sequence Length = 1685 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 139 cgcggcggtcgcgctctgcagcgaccgctccgcgctgctggccgacgccattcgcca 195 |||||| |||||||| ||| | |||||| || ||||||||||||||||||| ||||| Sbjct: 1316 cgcggccgtcgcgctgtgccgggaccgcgccccgctgctggccgacgccatccgcca 1260
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 412 ctcggacgacgaagacggctccgacg 437 |||||||||||||||||||||||||| Sbjct: 2045134 ctcggacgacgaagacggctccgacg 2045109
>emb|BX929833.2| Gallus gallus finished cDNA, clone ChEST653o6 Length = 711 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgctcgagcc 303 |||||||||||||||||||||||||| Sbjct: 28 ctgcagccgccgccgccgctcgagcc 3
>ref|XM_608490.2| PREDICTED: Bos taurus similar to mannosidase, alpha, class 1A, member 1 (LOC530027), partial mRNA Length = 1530 Score = 50.1 bits (25), Expect = 0.006 Identities = 35/37 (94%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctcgagccccccgccc 311 ||||||| |||||||||||||| |||||||||||||| Sbjct: 575 ctgctgctgccgccgccgccgc-cgagccccccgccc 540
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||||||||||| Sbjct: 156336 gccgccgccgccgctcgagccccc 156359
>gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040G18, complete sequence Length = 172281 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||||||||||| Sbjct: 28689 gccgccgccgccgctcgagccccc 28666
>ref|NM_016606.2| Homo sapiens receptor accessory protein 2 (REEP2), mRNA Length = 2117 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 |||||||||| ||||||||||||||||| Sbjct: 32 ctcctgctgccgccgccgccgccgctcg 59
>gb|BC006218.2| Homo sapiens receptor accessory protein 2, mRNA (cDNA clone MGC:10610 IMAGE:3940709), complete cds Length = 2117 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 |||||||||| ||||||||||||||||| Sbjct: 32 ctcctgctgccgccgccgccgccgctcg 59
>dbj|AK056193.1| Homo sapiens cDNA FLJ31631 fis, clone NT2RI2003383, highly similar to Homo sapiens SGC32445 protein mRNA Length = 2142 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 |||||||||| ||||||||||||||||| Sbjct: 74 ctcctgctgccgccgccgccgccgctcg 101
>gb|AC104791.3| Homo sapiens BAC clone RP11-181K12 from 4, complete sequence Length = 159969 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 270 tcctcctgctgcagccgccgccgccgct 297 |||||||||| ||||||||||||||||| Sbjct: 148500 tcctcctgctccagccgccgccgccgct 148527
>gb|AC004821.3| Homo sapiens chromosome 5 clone RP1-98O22, complete sequence Length = 163332 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 |||||||||| ||||||||||||||||| Sbjct: 42699 ctcctgctgccgccgccgccgccgctcg 42672
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||||||||||| Sbjct: 4675338 gccgccgccgccgctcgagccccc 4675315 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||||||||||| Sbjct: 4622694 gccgccgccgccgctcgagccccc 4622717 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 19261325 cctcctgctgccgccgccgccgccgc 19261350 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||| ||||||| Sbjct: 2049919 gccgccgccgccgctctagccccc 2049896
>dbj|AK223611.1| Homo sapiens mRNA for receptor expression enhancing protein 2 variant, clone: FCC132H05 Length = 2146 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 |||||||||| ||||||||||||||||| Sbjct: 59 ctcctgctgccgccgccgccgccgctcg 86
>gb|AC113403.4| Homo sapiens chromosome 5 clone RP11-461O14, complete sequence Length = 167159 Score = 48.1 bits (24), Expect = 0.025 Identities = 27/28 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 |||||||||| ||||||||||||||||| Sbjct: 68604 ctcctgctgccgccgccgccgccgctcg 68631
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||||||||||| Sbjct: 4694122 gccgccgccgccgctcgagccccc 4694099 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||||||||||| Sbjct: 4643104 gccgccgccgccgctcgagccccc 4643127 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 19420874 cctcctgctgccgccgccgccgccgc 19420899 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||| ||||||| Sbjct: 2057700 gccgccgccgccgctctagccccc 2057677
>gb|AC095018.2| Drosophila melanogaster clone BACR24L18, complete sequence Length = 163116 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 130135 ctgctgcagccgccgccgccgct 130157
>gb|BC059250.1| Mus musculus cDNA clone IMAGE:6405349, partial cds Length = 5100 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctcgagcccc 305 ||||||| |||||||||||||| |||||||| Sbjct: 1707 ctgctgccgccgccgccgccgcccgagcccc 1737
>gb|BT016031.1| Drosophila melanogaster RE04174 full insert cDNA Length = 4872 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 1735 ctgctgcagccgccgccgccgct 1757
>emb|X54453.1|DMABDA D. melanogaster abdominal-A (abd-A) mRNA for homeobox protein Length = 1772 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 610 ctgctgcagccgccgccgccgct 632
>emb|X51406.1|RNCARBE Rat mRNA for carboxypeptidase E (EC 3.4.17.10) Length = 2092 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 228 tcctcctgctgcagccgccggcgccgc 202
>emb|AJ245964.1|DRE245964 Danio rerio mRNA for Pbx3b homeodomain protein (pbx3b gene) Length = 2653 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 532 ctgctgcagccgccgccgccgct 510
>gb|BC085762.1| Rattus norvegicus carboxypeptidase E, mRNA (cDNA clone MGC:93638 IMAGE:7193151), complete cds Length = 2122 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 227 tcctcctgctgcagccgccggcgccgc 201
>dbj|AK027296.1| Homo sapiens cDNA FLJ14390 fis, clone HEMBA1003071, weakly similar to INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN COMPLEX ACID LABILE CHAIN PRECURSOR (ALS) Length = 2062 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccgccgctc 298 |||||||||| |||||||||||||||| Sbjct: 39 ctcctgctgccgccgccgccgccgctc 13
>ref|NM_169733.2| Drosophila melanogaster abdominal A CG10325-RB, transcript variant B (abd-A), mRNA Length = 3946 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 830 ctgctgcagccgccgccgccgct 852
>ref|NM_057345.2| Drosophila melanogaster abdominal A CG10325-RA, transcript variant A (abd-A), mRNA Length = 4758 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 1642 ctgctgcagccgccgccgccgct 1664
>dbj|AB169871.1| Macaca fascicularis brain cDNA, clone: QflA-11442, similar to human carboxypeptidase E (CPE), mRNA, RefSeq: NM_001873.1 Length = 2290 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 286 tcctcctgctgcagccgccggcgccgc 260
>ref|NM_131616.1| Danio rerio pre-B-cell leukemia transcription factor 3b (pbx3b), mRNA Length = 2653 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 532 ctgctgcagccgccgccgccgct 510
>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence Length = 190274 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctc 298 |||||||||| |||||||||||||||| Sbjct: 47157 ctcctgctgccgccgccgccgccgctc 47183
>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence Length = 161953 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctc 298 |||||||||| |||||||||||||||| Sbjct: 143389 ctcctgctgccgccgccgccgccgctc 143415
>ref|NM_013128.1| Rattus norvegicus carboxypeptidase E (Cpe), mRNA Length = 2092 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 228 tcctcctgctgcagccgccggcgccgc 202
>gb|AE003715.4| Drosophila melanogaster chromosome 3R, section 53 of 118 of the complete sequence Length = 228547 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 27559 ctgctgcagccgccgccgccgct 27537
>gb|L31790.1|L31790 Drosophila melanogaster (P1 DS00846 (D02)) DNA sequence, complete sequence Length = 77447 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 47987 ctgctgcagccgccgccgccgct 48009
>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence Length = 338234 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 156155 ctgctgcagccgccgccgccgct 156177
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctcgagcccc 305 ||||||| |||||||||||||| |||||||| Sbjct: 185402 ctgctgccgccgccgccgccgcccgagcccc 185372
>gb|AF440684.1| Danio rerio transcription factor Pbx3.2 (pbx3.2) mRNA, partial cds Length = 717 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgct 297 ||||||||||||||||||||||| Sbjct: 167 ctgctgcagccgccgccgccgct 145
>gb|L07273.1|RATCPE01 Rattus norvegicus carboxypeptidase E (CPE) gene, exon 1 Length = 5907 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 5602 tcctcctgctgcagccgccggcgccgc 5576
>gb|J04625.1|RATCARP Rat carboxypeptidase H mRNA, complete cds Length = 1893 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 183 tcctcctgctgcagccgccggcgccgc 157
>gb|M31602.1|RATCARE Rat carboxypeptidase E mRNA, complete cds Length = 1989 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgc 296 |||||||||||||||||||| |||||| Sbjct: 199 tcctcctgctgcagccgccggcgccgc 173
>dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clone:91h23 to 9-41 Length = 178348 Score = 46.1 bits (23), Expect = 0.098 Identities = 26/27 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgctc 298 |||||||||| |||||||||||||||| Sbjct: 173852 ctcctgctgccgccgccgccgccgctc 173878
>gb|AY020312.1| Oryza sativa microsatellite MRG2637 containing (GA)X13, genomic sequence Length = 226 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctcgagccc 304 ||||||| |||||||||||||||| ||||| Sbjct: 49 ctgctgccgccgccgccgccgctccagccc 78
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 130113 cctcctgctgccgccgccgccgccgc 130138
>ref|XM_607652.2| PREDICTED: Bos taurus similar to aristaless related homeobox gene (LOC529211), mRNA Length = 1956 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 638 ctgctgcagccgccgccgccgc 659
>ref|XM_954246.1| Neurospora crassa OR74A hypothetical protein (NCU08249.1) partial mRNA Length = 726 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 tgctgcagccgccgccgccgct 297 |||||||||||||||||||||| Sbjct: 621 tgctgcagccgccgccgccgct 600
>ref|XM_328954.1| Neurospora crassa OR74A hypothetical protein (NCU08249.1) partial mRNA Length = 726 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 276 tgctgcagccgccgccgccgct 297 |||||||||||||||||||||| Sbjct: 621 tgctgcagccgccgccgccgct 600
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 gcagccgccgccgccgctcgagcccc 305 ||||||||||||||||||||| |||| Sbjct: 5979860 gcagccgccgccgccgctcgatcccc 5979835 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagcc 303 |||||||||||||||||||| Sbjct: 11355454 ccgccgccgccgctcgagcc 11355473
>ref|XM_380473.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00297.1) partial mRNA Length = 2160 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 961 ctgctgcagccgccgccgccgc 940
>ref|XM_848542.1| PREDICTED: Canis familiaris similar to Protein C9orf150 homolog (LOC610949), mRNA Length = 1086 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 173 ctgctgcagccgccgccgccgc 152
>gb|AF521671.1| Homo sapiens SWI/SNF chromatin remodeling complex subunit OSA2 (OSA2) mRNA, partial cds Length = 7757 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 842 cctcctgctgctgccgccgccgccgc 817
>ref|NM_017519.1| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 1, mRNA Length = 8246 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 1033 cctcctgctgctgccgccgccgccgc 1008
>ref|NM_020732.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 2, mRNA Length = 8126 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 1033 cctcctgctgctgccgccgccgccgc 1008
>ref|NM_175863.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 3, mRNA Length = 8087 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 1033 cctcctgctgctgccgccgccgccgc 1008
>gb|BC114888.1| Bos taurus cDNA clone MGC:139220 IMAGE:8091175, complete cds Length = 1336 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 146 ctgctgcagccgccgccgccgc 125
>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the gene for DAN15 protein, a H3 histone, family 3A (H3F3A) (H3F3, H3.3A) pseudogene, the 5' end of the gene for BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG islands, complete sequence Length = 169218 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 153862 cctcctgctgctgccgccgccgccgc 153837
>gb|AC122091.6| Rattus norvegicus 9 BAC CH230-375L16 (Children's Hospital Oakland Research Institute) complete sequence Length = 231967 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctccgcgctgctggccgacgcc 187 |||||||||||||||||||||| Sbjct: 210617 ctccgcgctgctggccgacgcc 210596
>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland Research Institute) complete sequence Length = 217001 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctccgcgctgctggccgacgcc 187 |||||||||||||||||||||| Sbjct: 112079 ctccgcgctgctggccgacgcc 112100
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence Length = 164572 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctcgagccc 304 ||||||| |||||||||||||||| ||||| Sbjct: 33113 ctgctgccgccgccgccgccgctccagccc 33084
>gb|AY834284.1| Coturnix coturnix groucho-related protein 3 (Grg3) mRNA, partial cds Length = 405 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgct 297 |||||||||||||||||||||| Sbjct: 118 tgctgcagccgccgccgccgct 139
>gb|AC091236.8| Mus Musculus Strain C57BL6/J Chromosome 14 BAC, RP23-362J12, Complete Sequence, complete sequence Length = 180371 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 168109 ctgctgcagccgccgccgccgc 168130
>gb|AC096692.5| Drosophila melanogaster 3L BAC RP98-48O3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173782 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 50091 ctgctgcagccgccgccgccgc 50070
>ref|NM_168439.1| Drosophila melanogaster JIL-1 CG6297-RA, transcript variant A (JIL-1), mRNA Length = 5715 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 821 ctgctgcagccgccgccgccgc 800
>ref|NM_140175.2| Drosophila melanogaster JIL-1 CG6297-RB, transcript variant B (JIL-1), mRNA Length = 6494 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 1605 ctgctgcagccgccgccgccgc 1584
>dbj|AK147374.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1023O12 product:latrophilin 3, full insert sequence Length = 6156 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 |||||| ||||||||||||||||||| Sbjct: 255 cctcctcctgcagccgccgccgccgc 230
>dbj|AK155931.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830001D19 product:latrophilin 3, full insert sequence Length = 3141 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 |||||| ||||||||||||||||||| Sbjct: 75 cctcctcctgcagccgccgccgccgc 50
>dbj|AK159024.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530035P04 product:latrophilin 3, full insert sequence Length = 2728 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 |||||| ||||||||||||||||||| Sbjct: 688 cctcctcctgcagccgccgccgccgc 663
>gb|AC154687.2| Mus musculus BAC clone RP24-327L23 from chromosome 14, complete sequence Length = 150808 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 46144 ctgctgcagccgccgccgccgc 46123
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 gcagccgccgccgccgctcgagcccc 305 ||||||||||||||||||||| |||| Sbjct: 38395 gcagccgccgccgccgctcgatcccc 38370
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctcgagccc 304 ||||||| |||||||||||||||| ||||| Sbjct: 28757845 ctgctgccgccgccgccgccgctccagccc 28757874 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagc 302 |||||||||||||||||||| Sbjct: 32502044 gccgccgccgccgctcgagc 32502063 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagccgccgccgccgctcg 299 |||||||||||||||||||| Sbjct: 8386322 gcagccgccgccgccgctcg 8386341 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgctcg 299 |||||| ||||||||||||||||| Sbjct: 7044114 tgctgcggccgccgccgccgctcg 7044137
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 22816477 ctgctgcagccgccgccgccgc 22816498 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccg 295 ||||||||||| ||||||||||||| Sbjct: 23849729 cctcctgctgccgccgccgccgccg 23849753 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 280 gcagccgccgccgccgctcgagccccccgccct 312 ||||||||||||||||| || || ||||||||| Sbjct: 23112349 gcagccgccgccgccgcccgcgcgccccgccct 23112317 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 27830325 ctgctgctgccgccgccgccgctc 27830302 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tcctgctgcagccgccgccgccgc 296 ||||||||| |||||||||||||| Sbjct: 6866737 tcctgctgccgccgccgccgccgc 6866760
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 280 gcagccgccgccgccgctcgagcccc 305 ||||||||||||||||||||| |||| Sbjct: 5979073 gcagccgccgccgccgctcgatcccc 5979048 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagcc 303 |||||||||||||||||||| Sbjct: 11352217 ccgccgccgccgctcgagcc 11352236
>gb|AF253515.1| Homo sapiens BAF250b subunit mRNA, complete cds Length = 6361 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 249 cctcctgctgctgccgccgccgccgc 224
>gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complete sequence Length = 172574 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 132462 ctgctgcagccgccgccgccgc 132483
>ref|XM_237156.3| PREDICTED: Rattus norvegicus similar to hypothetical protein BC009115 (predicted) (LOC316403), mRNA Length = 2146 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctccgcgctgctggccgacgcc 187 |||||||||||||||||||||| Sbjct: 498 ctccgcgctgctggccgacgcc 519
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 9744 ctgctgcagccgccgccgccgc 9765
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 135819 ctgctgcagccgccgccgccgc 135840
>dbj|AK109206.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C09, full insert sequence Length = 668 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 409 cctcctgctgccgccgccgccgccgc 434
>dbj|AK100534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101N06, full insert sequence Length = 3665 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 280 gcagccgccgccgccgctcgagcccc 305 ||||||||||||||||||||| |||| Sbjct: 142 gcagccgccgccgccgctcgatcccc 167
>gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, complete sequence Length = 208233 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 |||||| ||||||||||||||||||| Sbjct: 41681 cctcctcctgcagccgccgccgccgc 41706
>gb|AF142061.1|AF142061 Drosophila melanogaster protein kinase JIL-1 (Jil-1) mRNA, complete cds Length = 6520 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 1614 ctgctgcagccgccgccgccgc 1593
>gb|AC006562.8|AC006562 Drosophila melanogaster, chromosome 3L, region 68A1-68B2, BAC clone BACR48O03, complete sequence Length = 173781 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 123691 ctgctgcagccgccgccgccgc 123712
>emb|AJ271870.1|RNO271870 Rattus norvegicus partial GR gene for glucocorticoid receptor, promoter region Length = 4891 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 1399 cctcctgctgccgccgccgccgccgc 1424
>gb|AE003546.4| Drosophila melanogaster chromosome 3L, section 39 of 83 of the complete sequence Length = 281589 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgc 296 |||||||||||||||||||||| Sbjct: 202896 ctgctgcagccgccgccgccgc 202917
>gb|AC114622.12| Mus musculus chromosome 5, clone RP24-103L18, complete sequence Length = 162467 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 |||||| ||||||||||||||||||| Sbjct: 159909 cctcctcctgcagccgccgccgccgc 159934
>emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate E7 Length = 6170 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccgc 296 ||||||||||| |||||||||||||| Sbjct: 1977 cctcctgctgctgccgccgccgccgc 2002
>ref|XM_466033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 753 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 268 cttcctcctgctgcagccgccgccgccgc 296 ||||||||||| || |||||||||||||| Sbjct: 323 cttcctcctgccgccgccgccgccgccgc 295
>ref|XM_478926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 384 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 271 cctcctgctgcagccgccgccgccg 295 ||||||||||| ||||||||||||| Sbjct: 237 cctcctgctgccgccgccgccgccg 213
>ref|XM_478797.1| Oryza sativa (japonica cultivar-group), mRNA Length = 330 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 280 gcagccgccgccgccgctcgagccccccgccct 312 ||||||||||||||||| || || ||||||||| Sbjct: 97 gcagccgccgccgccgcccgcgcgccccgccct 65
>gb|DQ151642.1| Chlamydomonas reinhardtii WD repeat protein (ODA16) mRNA, complete cds Length = 2185 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 1530 tgctgcagccgccgccgccgc 1510
>gb|BT018780.1| Zea mays clone EL01N0526D07.d mRNA sequence Length = 2006 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 1040 gctgcagccgccgccgccgct 1060
>gb|BT017237.1| Zea mays clone EL01N0304G04.c mRNA sequence Length = 1057 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagcc 303 ||||||||||||||||||||| Sbjct: 114 gccgccgccgccgctcgagcc 134
>gb|AC092241.2| Drosophila melanogaster clone BACR09F02, complete sequence Length = 178190 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 28696 tgctgcagccgccgccgccgc 28716
>ref|XM_872327.1| PREDICTED: Bos taurus similar to family with sequence similarity 46, member A, transcript variant 2 (LOC540234), mRNA Length = 1211 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccgccgc 296 |||||||||| |||||||||||||| Sbjct: 39 ctcctgctgccgccgccgccgccgc 15
>gb|AC149483.1| Populus trichocarpa clone Pop1-69I13, complete sequence Length = 51685 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 45943 tgctgcagccgccgccgccgc 45963
>ref|NM_000814.4| Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 3 (GABRB3), transcript variant 1, mRNA Length = 5811 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccgccgc 296 |||||||||| |||||||||||||| Sbjct: 75 ctcctgctgctgccgccgccgccgc 51
>gb|AC122363.4| Mus musculus BAC clone RP23-437C1 from chromosome 19, complete sequence Length = 180129 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 138528 gctgcagccgccgccgccgct 138548
>ref|XM_846517.1| PREDICTED: Canis familiaris similar to U11/U12 snRNP 48K (LOC609283), mRNA Length = 1245 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccg 292 ||||||||||||||||||||| Sbjct: 228 ctcctgctgcagccgccgccg 208
>ref|XM_993887.1| PREDICTED: Mus musculus hypothetical protein LOC676899 (LOC676899), mRNA Length = 390 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||| || ||||||||||| Sbjct: 129 gccgccgccgccgcccgggccccccgccc 157
>ref|XM_001002770.1| PREDICTED: Mus musculus hypothetical protein LOC668637 (LOC668637), mRNA Length = 537 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||| || ||||||||||| Sbjct: 276 gccgccgccgccgcccgggccccccgccc 304
>ref|XM_001002765.1| PREDICTED: Mus musculus MYC-associated zinc finger protein (purine-binding transcription factor) (Maz), mRNA Length = 2862 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||| || ||||||||||| Sbjct: 1 gccgccgccgccgcccgggccccccgccc 29
>gb|AC007610.10| Homo sapiens chromosome 16 clone RP11-429P3, complete sequence Length = 214786 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctcg 299 ||||||| ||||||||||||||||| Sbjct: 55265 ctgctgctgccgccgccgccgctcg 55289
>gb|AC122863.4| Mus musculus BAC clone RP23-142A14 from chromosome 7, complete sequence Length = 226601 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||| || ||||||||||| Sbjct: 167445 gccgccgccgccgcccgggccccccgccc 167417
>gb|AC122537.4| Mus musculus BAC clone RP24-548A15 from chromosome 7, complete sequence Length = 195987 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||| || ||||||||||| Sbjct: 1780 gccgccgccgccgcccgggccccccgccc 1752
>emb|AJ585768.1| Bos taurus mRNA for alpha2,3-sialyltransferase (st3Gal-V gene) Length = 1436 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagcc 303 ||||||||||||||||||||| Sbjct: 25 gccgccgccgccgctcgagcc 5
>emb|AL121957.15|HSDJ67A8 Human DNA sequence from clone RP1-67A8 on chromosome 6q16.2-21 Contains the 5' end of a novel gene, a novel gene, the 5' end of the C6orf210 gene for chromosome 6 open reading frame 210 and two CpG islands, complete sequence Length = 154918 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgc 296 |||||||||| |||||||||||||| Sbjct: 49360 ctcctgctgccgccgccgccgccgc 49384
>emb|AL034344.24|HS118B18 Human DNA sequence from clone RP1-118B18 on chromosome 6p24.1-25.3 Contains the FOXC1 gene for forkhead box C1 gene, the 3' end of the GMDS gene for GDP-mannose 4 6-dehydratase and four CpG Islands, complete sequence Length = 104729 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 gacttcctcctgctgcagccg 286 ||||||||||||||||||||| Sbjct: 90139 gacttcctcctgctgcagccg 90119
>gb|AY164741.1| Rattus norvegicus RTN4-B2 (Rtn4) mRNA, complete cds; alternatively spliced Length = 2782 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 481 gctgcagccgccgccgccgct 461
>ref|NM_205807.1| Bos taurus alpha2,3-sialyltransferase (ST3GAL-V), mRNA Length = 1436 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagcc 303 ||||||||||||||||||||| Sbjct: 25 gccgccgccgccgctcgagcc 5
>gb|AC010107.7| Drosophila melanogaster 3L BAC RP98-2B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181063 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 62392 gctgcagccgccgccgccgct 62412
>gb|AC104569.7| Homo sapiens chromosome 15, clone RP11-147D1, complete sequence Length = 152001 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgccgccgc 296 |||||||||| |||||||||||||| Sbjct: 96857 ctcctgctgctgccgccgccgccgc 96881
>ref|NM_168361.1| Drosophila melanogaster CG16711-RB, transcript variant B (CG16711), mRNA Length = 4971 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 4537 gctgcagccgccgccgccgct 4517
>ref|NM_144331.1| Drosophila melanogaster CG12508-RA (CG12508), mRNA Length = 222 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 ccgccgccgccgctcgagccc 304 ||||||||||||||||||||| Sbjct: 200 ccgccgccgccgctcgagccc 180
>ref|NM_140090.1| Drosophila melanogaster CG16711-RA, transcript variant A (CG16711), mRNA Length = 4899 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 4465 gctgcagccgccgccgccgct 4445
>ref|NM_135651.2| Drosophila melanogaster CG4751-RA (CG4751), mRNA Length = 4879 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 234 tgctgcagccgccgccgccgc 254
>gb|AC091220.3| Drosophila melanogaster 3L BAC RP98-7E7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179838 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 47720 gctgcagccgccgccgccgct 47700
>dbj|AB169737.1| Macaca fascicularis brain cDNA, clone: QflA-14438, similar to human BAI1-associated protein 2 (BAIAP2), transcript variant1, mRNA, RefSeq: NM_017450.1 Length = 2077 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctcg 299 ||||||| ||||||||||||||||| Sbjct: 47 ctgctgccgccgccgccgccgctcg 71
>gb|AY051978.1| Drosophila melanogaster LD44770 full length cDNA Length = 4877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 214 tgctgcagccgccgccgccgc 234
>gb|AC009252.9|AC009252 Drosophila melanogaster, chromosome 2L, region 38A-38A, BAC clone BACR22E16, complete sequence Length = 164361 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagccc 304 ||||||||||||||||||||| Sbjct: 56302 ccgccgccgccgctcgagccc 56322
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 ccgccgccgccgctcgagccccccg 308 |||||||||||||||||||| |||| Sbjct: 29617904 ccgccgccgccgctcgagccacccg 29617880 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 tgcagccgccgccgccgctcg 299 ||||||||||||||||||||| Sbjct: 2840527 tgcagccgccgccgccgctcg 2840547 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgcc 310 |||||||||||| |||||||||| |||| Sbjct: 13313310 gccgccgccgcctctcgagccccgcgcc 13313337
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 cttcctcctgctgcagccgccgccgccgc 296 ||||||||||| || |||||||||||||| Sbjct: 19206152 cttcctcctgccgccgccgccgccgccgc 19206180 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cgccgccgccgctcgagccc 304 |||||||||||||||||||| Sbjct: 19365746 cgccgccgccgctcgagccc 19365765 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgctcg 299 ||||||||| |||||||||||||| Sbjct: 4482815 tgctgcagctgccgccgccgctcg 4482838
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||||||| | |||||||| Sbjct: 32259038 gccgccgccgccgctcgaccgccccgccc 32259066 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 40214238 ctgctgctgccgccgccgccgctc 40214215 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 38045672 ctgctgccgccgccgccgccgctc 38045649
>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence Length = 192814 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctcg 299 ||||||| ||||||||||||||||| Sbjct: 172279 ctgctgctgccgccgccgccgctcg 172303
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||||||| | |||||||| Sbjct: 129791 gccgccgccgccgctcgaccgccccgccc 129819
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 285 cgccgccgccgctcgagccccccgc 309 ||||||||||||||| ||||||||| Sbjct: 2833267 cgccgccgccgctcgcgccccccgc 2833243 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 cgctccccgccgccgacgcgc 368 ||||||||||||||||||||| Sbjct: 555351 cgctccccgccgccgacgcgc 555331
>ref|XM_218617.3| PREDICTED: Rattus norvegicus myosin, heavy polypeptide 14 (predicted) (Myh14_predicted), mRNA Length = 6449 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccg 292 ||||||||||||||||||||| Sbjct: 4394 ctcctgctgcagccgccgccg 4374
>dbj|AP005149.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0005G07 Length = 142850 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccg 295 ||||||||||| ||||||||||||| Sbjct: 4656 cctcctgctgccgccgccgccgccg 4680
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 284 ccgccgccgccgctcgagccccccg 308 |||||||||||||||||||| |||| Sbjct: 61489 ccgccgccgccgctcgagccacccg 61465
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 tgcagccgccgccgccgctcg 299 ||||||||||||||||||||| Sbjct: 84008 tgcagccgccgccgccgctcg 84028
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 tgcagccgccgccgccgctcg 299 ||||||||||||||||||||| Sbjct: 673 tgcagccgccgccgccgctcg 693
>dbj|AP005767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0035G04 Length = 155636 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagcc 303 ||||||||||||||||||||| Sbjct: 29034 gccgccgccgccgctcgagcc 29014
>dbj|AP005780.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0051H02 Length = 136520 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagcc 303 ||||||||||||||||||||| Sbjct: 101845 gccgccgccgccgctcgagcc 101825
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 271 cctcctgctgcagccgccgccgccg 295 ||||||||||| ||||||||||||| Sbjct: 38229 cctcctgctgccgccgccgccgccg 38253
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 cttcctcctgctgcagccgccgccgccgc 296 ||||||||||| || |||||||||||||| Sbjct: 104401 cttcctcctgccgccgccgccgccgccgc 104429
>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1699_E05 Length = 170666 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 280 gcagccgccgccgccgctcgagccccccgccct 312 ||||||||||||||||| || || ||||||||| Sbjct: 56533 gcagccgccgccgccgcccgcgcgccccgccct 56501
>dbj|AK067573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108E08, full insert sequence Length = 2675 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagccccccg 308 |||||||||||||||||||| |||| Sbjct: 294 ccgccgccgccgctcgagccacccg 318
>dbj|AK062326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-D04, full insert sequence Length = 753 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 268 cttcctcctgctgcagccgccgccgccgc 296 ||||||||||| || |||||||||||||| Sbjct: 323 cttcctcctgccgccgccgccgccgccgc 295
>gb|AF132045.1|AF132045 Rattus norvegicus foocen-m2 mRNA, alternate splice product, complete cds Length = 2782 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 481 gctgcagccgccgccgccgct 461
>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete sequence Length = 266287 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagccc 304 ||||||||||||||||||||| Sbjct: 237736 ccgccgccgccgctcgagccc 237756
>gb|AE003631.4| Drosophila melanogaster chromosome 2L, section 40 of 83 of the complete sequence Length = 256684 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 73531 tgctgcagccgccgccgccgc 73551
>gb|AE003551.3| Drosophila melanogaster chromosome 3L, section 34 of 83 of the complete sequence Length = 285860 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgct 297 ||||||||||||||||||||| Sbjct: 232302 gctgcagccgccgccgccgct 232282
>gb|AC005115.1|AC005115 Drosophila melanogaster DNA sequence (P1 DS06882 (D310)), complete sequence Length = 83141 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgc 296 ||||||||||||||||||||| Sbjct: 36362 tgctgcagccgccgccgccgc 36382
>emb|AL929291.9| Zebrafish DNA sequence from clone CH211-189P10 in linkage group 20, complete sequence Length = 149681 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 ttgaggttttcaaactgttttgctt 71 |||| |||||||||||||||||||| Sbjct: 82677 ttgatgttttcaaactgttttgctt 82701
>gb|L04311.1|HUMGAB3R Human GABA-A receptor beta-3 subunit (GABRB3) gene, 5' end Length = 1433 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccgccgc 296 |||||||||| |||||||||||||| Sbjct: 786 ctcctgctgctgccgccgccgccgc 762
>dbj|AB006360.1| Mus musculus DNA for MUSPUR, partial cds Length = 5615 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgccc 311 |||||||||||||| || ||||||||||| Sbjct: 1512 gccgccgccgccgcccgggccccccgccc 1540
>ref|NM_128172.2| Arabidopsis thaliana FTSH4; ATP-dependent peptidase/ ATPase/ metallopeptidase AT2G26140 (FTSH4) mRNA, complete cds Length = 2713 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 2281 gctgcagccgccgccgccgc 2300
>ref|NM_001035305.1| Bos taurus similar to RPB5-mediating protein isoform a (MGC128688), mRNA Length = 2583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 99 gctgcagccgccgccgccgc 80
>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01, complete sequence Length = 119525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagcc 303 |||||||||||||||||||| Sbjct: 95208 ccgccgccgccgctcgagcc 95227
>gb|AC165274.2| Mus musculus BAC clone RP24-97D3 from chromosome 16, complete sequence Length = 175488 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 85003 ctgctgctgccgccgccgccgctc 84980
>ref|XM_510590.1| PREDICTED: Pan troglodytes semaphorin 4B (LOC453646), mRNA Length = 2144 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgcc 291 |||||||||||||||||||| Sbjct: 339 ctcctgctgcagccgccgcc 358
>ref|XM_482158.1| Oryza sativa (japonica cultivar-group), mRNA Length = 817 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagccgccgccgccgctcg 299 |||||||||||||||||||| Sbjct: 64 gcagccgccgccgccgctcg 83
>ref|XM_507218.1| PREDICTED Oryza sativa (japonica cultivar-group), P0434E03.16-1 mRNA Length = 1790 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagccgccgccgccgctcg 299 |||||||||||||||||||| Sbjct: 66 gcagccgccgccgccgctcg 85
>ref|XM_482157.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1734 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gcagccgccgccgccgctcg 299 |||||||||||||||||||| Sbjct: 101 gcagccgccgccgccgctcg 120
>ref|XM_475384.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 184 gctgcagccgccgccgccgc 165
>ref|XM_466056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 552 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cgccgccgccgctcgagccc 304 |||||||||||||||||||| Sbjct: 498 cgccgccgccgctcgagccc 517
>ref|NM_001003220.1| Canis familiaris podoplanin (PDPN), mRNA Length = 1531 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 268 cttcctcctgctgcagccgccgccgccg 295 ||||||||| | |||||||||||||||| Sbjct: 35 cttcctcctcccgcagccgccgccgccg 8
>ref|XM_464325.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1266 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgctcg 299 ||||||||| |||||||||||||| Sbjct: 614 tgctgcagctgccgccgccgctcg 637
>ref|NM_196459.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015J03.15), mRNA Length = 663 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 614 ctgctgccgccgccgccgccgctc 591
>ref|NM_190125.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 559 ctgctgccgccgccgccgccgctc 536
>ref|NM_000232.3| Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA Length = 4229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 49 ctgcagccgccgccgccgct 30
>ref|XM_479416.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2010 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 359 ctgctgctgccgccgccgccgctc 336
>ref|NM_186634.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 tcctgctgcagccgccgccgccgc 296 ||||||||| |||||||||||||| Sbjct: 665 tcctgctgccgccgccgccgccgc 688
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agccgccgccgccgctcgag 301 |||||||||||||||||||| Sbjct: 12144 agccgccgccgccgctcgag 12163
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 67371 ctgctgccgccgccgccgccgctc 67348
>ref|NM_006833.4| Homo sapiens COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) (COPS6), mRNA Length = 1441 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 60 gctgcagccgccgccgccgc 41
>gb|BT019433.1| Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) mRNA, complete cds Length = 957 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 28 ctgcagccgccgccgccgct 9
>gb|AC137613.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034K10, complete sequence Length = 138925 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agccgccgccgccgctcgag 301 |||||||||||||||||||| Sbjct: 99079 agccgccgccgccgctcgag 99098
>gb|U72484.1| Fugu rubripes RNA helicase (RNA-H) gene, partial cds; calcium channel beta3 subunit (CAB3B), adenylyl cyclase type VI (AC-VI), glucose-6-phosphate dehydrogenase (G6PD), and L-glycerol-3-phosphate (LG3P) genes, complete cds; and sodium channel 2 (BNaC2) gene, partial cds Length = 61901 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 15953 gctgcagccgccgccgccgc 15972
>gb|AY023267.1| Oryza sativa microsatellite MRG5592 containing (GGC)X8, closest to marker R277, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctgctgcagccgccgccgccgc 296 ||||||||| |||||||||||||| Sbjct: 131 tcctgctgccgccgccgccgccgc 108
>gb|AC093473.6| Mus musculus chromosome 5, clone RP23-54H12, complete sequence Length = 208876 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 69443 gctgcagccgccgccgccgc 69462
>gb|AY023172.1| Oryza sativa microsatellite MRG5497 containing (GCG)X8, closest to marker R3203, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 191 ctgctgctgccgccgccgccgctc 214
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 cgaccgctccgcgctgctggccga 183 ||||||| |||||||||||||||| Sbjct: 1760501 cgaccgcaccgcgctgctggccga 1760524
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 89203 gctgcagccgccgccgccgc 89222
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04, complete sequence Length = 88553 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 7277 gctgcagccgccgccgccgc 7296
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 128770 gctgcagccgccgccgccgc 128789
>gb|BC079866.1| Mus musculus RIKEN cDNA 9630044O09 gene, mRNA (cDNA clone MGC:99894 IMAGE:6811096), complete cds Length = 2757 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgcc 294 |||||||||||||||||||| Sbjct: 293 ctgctgcagccgccgccgcc 312
>ref|XM_865223.1| PREDICTED: Bos taurus similar to H43E16.1 (LOC508553), partial mRNA Length = 4636 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgcc 310 |||||||||||||| || |||||||||| Sbjct: 519 gccgccgccgccgcccgcgccccccgcc 546
>gb|AY532722.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiB) gene, complete cds Length = 1130 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctcgagc 302 ||||||| |||||||||||||| ||||| Sbjct: 234 ctgctgccgccgccgccgccgcccgagc 207
>ref|XM_367503.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07414.4) partial mRNA Length = 2712 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 287 ccgccgccgctcgagccccccgccctaccgcc 318 ||||||||||||||| |||||| ||| ||||| Sbjct: 2086 ccgccgccgctcgagacccccggcctcccgcc 2117
>ref|XM_369222.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00022.4) partial mRNA Length = 12354 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 10459 ctgctgccgccgccgccgccgctc 10436
>ref|XM_425270.1| PREDICTED: Gallus gallus similar to PRYA1876 (LOC427696), mRNA Length = 1059 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 108 gctgcagccgccgccgccgc 89
>ref|XM_604802.2| PREDICTED: Bos taurus similar to Y50C1A.1 (LOC526431), partial mRNA Length = 2246 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1485 gctgcagccgccgccgccgc 1504
>ref|XM_322995.1| Neurospora crassa OR74A hypothetical protein (NCU03694.1) partial mRNA Length = 1704 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1564 gctgcagccgccgccgccgc 1583
>ref|XM_593549.2| PREDICTED: Bos taurus similar to La ribonucleoprotein domain family member 2 isoform 1 (LOC515517), mRNA Length = 4041 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1089 gctgcagccgccgccgccgc 1108
>gb|AC127266.4| Mus musculus BAC clone RP24-347B12 from chromosome 5, complete sequence Length = 185232 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 2348 gctgcagccgccgccgccgc 2367
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 71193 gctgcagccgccgccgccgc 71212
>gb|BC052033.1| Mus musculus aristaless related homeobox gene (Drosophila), mRNA (cDNA clone MGC:62389 IMAGE:5707995), complete cds Length = 2759 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1404 gctgcagccgccgccgccgc 1385 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 399 gctgcagccgccgccgccgc 380
>ref|XM_956377.1| Neurospora crassa OR74A hypothetical protein [Neurospora crassa OR74A] ) (NCU03694.1) partial mRNA Length = 1704 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1564 gctgcagccgccgccgccgc 1583
>gb|BC072413.1| Homo sapiens eukaryotic translation initiation factor 4 gamma, 3, mRNA (cDNA clone IMAGE:6165611), partial cds Length = 5764 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 186 ctgctgccgccgccgccgccgctc 163
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 19691 gctgcagccgccgccgccgc 19710
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ccgccgccgccgctcgagcc 303 |||||||||||||||||||| Sbjct: 703 ccgccgccgccgctcgagcc 722
>ref|NG_005145.2| Homo sapiens inosine monophosphate dehydrogenase 1 pseudogene (LOC139334) on chromosome X Length = 2500 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 59 gctgcagccgccgccgccgc 40
>gb|BC111584.1| Homo sapiens SRY (sex determining region Y)-box 21, mRNA (cDNA clone MGC:133419 IMAGE:40080556), complete cds, with stop codon, in Gateway system Length = 885 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 671 gctgcagccgccgccgccgc 652
>ref|XM_870447.1| PREDICTED: Bos taurus similar to syncoilin (LOC618122), mRNA Length = 5972 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 cctgctgcagccgccgccgccgct 297 ||||| |||||||||||||||||| Sbjct: 151 cctgccgcagccgccgccgccgct 128
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 89789 gctgcagccgccgccgccgc 89808
>gb|BC070879.1| Rattus norvegicus reticulon 4, mRNA (cDNA clone IMAGE:7096609), complete cds Length = 2410 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 154 gctgcagccgccgccgccgc 135
>gb|AC110092.4| Mus musculus BAC clone RP24-94E17 from chromosome 14, complete sequence Length = 184368 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ctgctgcagccgccgccgcc 294 |||||||||||||||||||| Sbjct: 165980 ctgctgcagccgccgccgcc 165961
>ref|NM_198925.1| Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B (SEMA4B), transcript variant 2, mRNA Length = 3809 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgcc 291 |||||||||||||||||||| Sbjct: 346 ctcctgctgcagccgccgcc 365
>ref|NM_020210.2| Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B (SEMA4B), transcript variant 1, mRNA Length = 3843 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgcc 291 |||||||||||||||||||| Sbjct: 380 ctcctgctgcagccgccgcc 399
>ref|NM_198014.2| Mus musculus RIKEN cDNA 9630044O09 gene (9630044O09Rik), mRNA Length = 2757 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgcc 294 |||||||||||||||||||| Sbjct: 293 ctgctgcagccgccgccgcc 312
>ref|NM_007084.2| Homo sapiens SRY (sex determining region Y)-box 21 (SOX21), mRNA Length = 2537 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 727 gctgcagccgccgccgccgc 708
>ref|NM_002236.4| Homo sapiens potassium voltage-gated channel, subfamily F, member 1 (KCNF1), mRNA Length = 2304 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 450 ctgcagccgccgccgccgct 431
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccc 306 |||||||||||||||| ||||||| Sbjct: 121474 gccgccgccgccgctctagccccc 121451
>gb|AY675299.1| Human adenovirus type 34 polypeptide IX gene, complete cds Length = 420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 181 gctgcagccgccgccgccgc 200
>gb|AC141882.3| Mus musculus BAC clone RP24-177O3 from chromosome 17, complete sequence Length = 173120 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 66616 ctgcagccgccgccgccgct 66597
>ref|XM_979717.1| PREDICTED: Mus musculus aristaless related homeobox gene (Drosophila) (Arx), mRNA Length = 2558 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1236 gctgcagccgccgccgccgc 1217
>ref|XM_983126.1| PREDICTED: Mus musculus aristaless related homeobox gene (Drosophila) (Arx), mRNA Length = 2471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1149 gctgcagccgccgccgccgc 1130
>ref|XM_974738.1| PREDICTED: Mus musculus similar to RIKEN cDNA 9630044O09 gene (LOC669383), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgcc 294 |||||||||||||||||||| Sbjct: 694 ctgctgcagccgccgccgcc 713
>ref|XM_974991.1| PREDICTED: Mus musculus trichohyalin (Tchh), mRNA Length = 5535 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cttcctcctgctgcagccgc 287 |||||||||||||||||||| Sbjct: 1777 cttcctcctgctgcagccgc 1758
>ref|XM_904350.2| PREDICTED: Mus musculus trichohyalin (Tchh), mRNA Length = 5691 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cttcctcctgctgcagccgc 287 |||||||||||||||||||| Sbjct: 1645 cttcctcctgctgcagccgc 1626
>ref|XM_001000857.1| PREDICTED: Mus musculus trichohyalin (Tchh), mRNA Length = 5691 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 cttcctcctgctgcagccgc 287 |||||||||||||||||||| Sbjct: 1645 cttcctcctgctgcagccgc 1626
>ref|XM_748838.1| Aspergillus fumigatus Af293 cyclin Ccl1 (Afu5g07030) partial mRNA Length = 1302 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 ttcctcctgctgcagccgccgccgccgc 296 ||||| ||||||| |||||||||||||| Sbjct: 1106 ttcctgctgctgctgccgccgccgccgc 1133
>ref|XM_846539.1| PREDICTED: Canis familiaris hypothetical protein LOC609300 (LOC609300), mRNA Length = 2819 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 339 gctgcagccgccgccgccgc 358
>gb|AC123859.4| Mus musculus BAC clone RP23-346B13 from chromosome 3, complete sequence Length = 221423 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cttcctcctgctgcagccgc 287 |||||||||||||||||||| Sbjct: 38018 cttcctcctgctgcagccgc 38037
>gb|AY445887.1| Homo sapiens semaphorin 4b precursor (SEMA4B) mRNA, complete cds Length = 3807 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgcc 291 |||||||||||||||||||| Sbjct: 357 ctcctgctgcagccgccgcc 376
>gb|AC125201.4| Mus musculus BAC clone RP23-224O3 from 14, complete sequence Length = 189542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgcc 294 |||||||||||||||||||| Sbjct: 161215 ctgctgcagccgccgccgcc 161234
>ref|NM_031831.1| Rattus norvegicus reticulon 4 (Rtn4), mRNA Length = 4684 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 33 gctgcagccgccgccgccgc 14
>gb|AE004138.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 46 of 251 of the complete chromosome Length = 11198 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 cacaccacccgcaatcacca 43 |||||||||||||||||||| Sbjct: 7415 cacaccacccgcaatcacca 7396
>ref|XM_851175.1| PREDICTED: Canis familiaris similar to Pro-neuregulin-2 precursor (Pro-NRG2), transcript variant 4 (LOC487158), mRNA Length = 2765 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgct 297 |||| ||||||| ||||||||||||||| Sbjct: 175 tcctgctgctgctgccgccgccgccgct 148
>ref|XM_544286.2| PREDICTED: Canis familiaris similar to Pro-neuregulin-2 precursor (Pro-NRG2), transcript variant 1 (LOC487158), mRNA Length = 2747 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgct 297 |||| ||||||| ||||||||||||||| Sbjct: 175 tcctgctgctgctgccgccgccgccgct 148
>ref|XM_843380.1| PREDICTED: Canis familiaris similar to Pro-neuregulin-2 precursor (Pro-NRG2), transcript variant 2 (LOC487158), mRNA Length = 2789 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgct 297 |||| ||||||| ||||||||||||||| Sbjct: 175 tcctgctgctgctgccgccgccgccgct 148
>ref|XM_851046.1| PREDICTED: Canis familiaris similar to Pro-neuregulin-2 precursor (Pro-NRG2), transcript variant 3 (LOC487158), mRNA Length = 2771 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 270 tcctcctgctgcagccgccgccgccgct 297 |||| ||||||| ||||||||||||||| Sbjct: 175 tcctgctgctgctgccgccgccgccgct 148
>gb|AY358392.1| Homo sapiens clone DNA67962 semaphorin C (UNQ749) mRNA, complete cds Length = 3781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ctcctgctgcagccgccgcc 291 |||||||||||||||||||| Sbjct: 337 ctcctgctgcagccgccgcc 356
>emb|AL031428.9|HS184J9 Human DNA sequence from clone RP1-184J9 on chromosome 1p35.1-36.12 Contains the 5' end of a novel gene, the gene for a novel protein (KIAA0601), a novel gene and the 5' end of the LUZP1 gene for leucine zipper protein 1, complete sequence Length = 100951 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 92764 gctgcagccgccgccgccgc 92783
>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13 Contains the 5' UTR of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3, the 3' end of the ECE1 gene for endothelin converting enzyme 1, a novel gene and a CpG island, complete sequence Length = 109906 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ctgctgcagccgccgccgccgctc 298 ||||||| |||||||||||||||| Sbjct: 4291 ctgctgccgccgccgccgccgctc 4314
>emb|AL591587.9| Human DNA sequence from clone RP11-315O19 on chromosome X Contains a IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1) pseudogene, complete sequence Length = 78767 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 4615 gctgcagccgccgccgccgc 4634
>emb|AL590368.11| Human DNA sequence from clone RP11-3K19 on chromosome 9 Contains the 5' end of the gene for CDw92 antigen (CDW92) (CTL1) and a CpG island, complete sequence Length = 92910 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 22521 gctgcagccgccgccgccgc 22540
>emb|AL513547.16| Human DNA sequence from clone RP11-160E12 on chromosome 6 Contains the 5' end of a novel gene, a novel gene, a PHD zinc finger protein XAP135 (XAP135) and three CpG islands, complete sequence Length = 91814 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgcc 310 |||||||||||||| || |||||||||| Sbjct: 91027 gccgccgccgccgcgcgggccccccgcc 91054
>gb|BT010118.1| Drosophila melanogaster AT27581 full insert cDNA Length = 3912 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 622 gctgcagccgccgccgccgc 641
>gb|BT010035.1| Drosophila melanogaster LD47819 full insert cDNA Length = 6628 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 3559 gctgcagccgccgccgccgc 3578
>ref|NM_007492.3| Mus musculus aristaless related homeobox gene (Drosophila) (Arx), mRNA Length = 2759 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 1404 gctgcagccgccgccgccgc 1385 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 399 gctgcagccgccgccgccgc 380
>emb|AL356217.30| Human DNA sequence from clone RP11-518D7 on chromosome 13 Contains a novel gene, complete sequence Length = 103060 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 50938 ctgcagccgccgccgccgct 50957
>emb|AL355482.13| Human DNA sequence from clone RP11-538D16 on chromosome 1q25.1-31.3 Contains the gene for a protein similar to zinc finger protein 135 (clone pHZ-17) zinc finger protein 61 (LOC127665) and two novel genes (LOC149157), complete sequence Length = 74515 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cctgggtctgggtgccatgg 95 |||||||||||||||||||| Sbjct: 38743 cctgggtctgggtgccatgg 38762
>emb|AL354806.22| Human DNA sequence from clone RP11-521J24 on chromosome 13 Contains a novel gene, complete sequence Length = 198959 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcaaactgttttgcttggt 74 |||||||||||||||||||| Sbjct: 38858 ttcaaactgttttgcttggt 38877
>emb|AL354892.19| Human DNA sequence from clone RP1-266L20 on chromosome 6 Contains two novel genes, the TCTE3 gene for t-complex-associated-testis-expressed 3, the gene for hypothetical protein FLJ11152 (FLJ10507 FLJ11458), a novel gene (FLJ31451), the 5' end of the gene for hypothetical protein FLJ13162 and three CpG islands, complete sequence Length = 79502 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagccccccgcc 310 |||||||||||||| || |||||||||| Sbjct: 1213 gccgccgccgccgcgcgggccccccgcc 1240
>emb|AL137061.12| Human DNA sequence from clone RP11-477B16 on chromosome 13 Contains the SOX21 gene for SRY (sex determining region Y)-box 21, a bromodomain containing 7 (BP75, NAG4, CELTIX1) (BRD7) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and 2 CpG islands, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 74860 gctgcagccgccgccgccgc 74879
>emb|AL109966.36|HSJ599G15 Human DNA sequence from clone RP4-599G15 on chromosome 1p12-13.2 Contains the 5' end of a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, two hydroxy-delta-5-steroid dehydrogenase 3 beta- and steroid delta-isomerase family (HSD3B) pseudogenes, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel gene, a novel gene (MGC45731), the 5' end of the PHGDH gene for phosphoglycerate dehydrogenase and a CpG island, complete sequence Length = 112616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 88834 gctgcagccgccgccgccgc 88815
>emb|AL049749.2|HS293L6 Human DNA sequence from clone RP1-293L6 on chromosome 22 Contains the first exon of the CACNG2 gene for voltage-dependent calcium channel gamma subunit 2, ESTs, STSs, GSSs and a putative CpG island, complete sequence Length = 99497 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tcctgctgcagccgccgccgccgc 296 ||||||||| |||||||||||||| Sbjct: 49782 tcctgctgccgccgccgccgccgc 49759
>emb|AL035400.13|HS879J18 Human DNA sequence from clone RP5-879J18 on chromosome 11p13 Contains the 3' part of a novel gene, an exon of a novel Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain protein and ESTs, an STS and two putative CpG islands, complete sequence Length = 111768 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 283 gccgccgccgccgctcgagccccccgcc 310 |||||||||||||| || |||||||||| Sbjct: 12052 gccgccgccgccgcccgcgccccccgcc 12025
>emb|AL031776.7|HS312L17 Human DNA sequence from clone RP1-312L17 on chromosome 6q22.2-23.1 Contains the 5' end of the FLJ14440 gene for thrombospondin and a CpG island, complete sequence Length = 108208 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 13421 gctgcagccgccgccgccgc 13402
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 15988 ctgcagccgccgccgccgct 16007
>gb|AF360344.1| Arabidopsis thaliana At2g26140 mRNA sequence Length = 2678 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 2228 gctgcagccgccgccgccgc 2247
>ref|NM_001031425.1| Gallus gallus similar to chromosome 9 open reading frame 41 (LOC427256), mRNA Length = 3737 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 272 ctcctgctgcagccgccgccgccgctcg 299 ||||||| || ||||||||||||||||| Sbjct: 270 ctcctgcggctgccgccgccgccgctcg 243
>gb|BC026110.2| Homo sapiens potassium voltage-gated channel, subfamily F, member 1, mRNA (cDNA clone MGC:33316 IMAGE:4797827), complete cds Length = 2306 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgcagccgccgccgccgct 297 |||||||||||||||||||| Sbjct: 452 ctgcagccgccgccgccgct 433
>gb|BC048134.1| Homo sapiens amine oxidase (flavin containing) domain 2, transcript variant 2, mRNA (cDNA clone MGC:57494 IMAGE:5298150), complete cds Length = 2969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gctgcagccgccgccgccgc 296 |||||||||||||||||||| Sbjct: 117 gctgcagccgccgccgccgc 98
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagc 302 |||||||||||||||||||| Sbjct: 20778 gccgccgccgccgctcgagc 20797
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 gccgccgccgccgctcgagc 302 |||||||||||||||||||| Sbjct: 118845 gccgccgccgccgctcgagc 118864
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21, complete sequence Length = 166475 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 tgctgcagccgccgccgccgctcg 299 |||||| ||||||||||||||||| Sbjct: 65305 tgctgcggccgccgccgccgctcg 65328 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,212,353 Number of Sequences: 3902068 Number of extensions: 3212353 Number of successful extensions: 231280 Number of sequences better than 10.0: 390 Number of HSP's better than 10.0 without gapping: 411 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 213240 Number of HSP's gapped (non-prelim): 17848 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)