ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl50e06 |
|---|---|
| Clone Library Name | barley_pub |
>ECM29_MOUSE (Q6PDI5) Proteasome-associated protein ECM29 homolog (Ecm29)| Length = 1840 Score = 82.8 bits (203), Expect = 5e-16 Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 1/102 (0%) Frame = +1 Query: 148 DALDRMLTRLALAE-DGRLAPLLVRVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRP 324 D L+R+ RL AE D +L ++ + LP + +ST VRK ME+L H+NKR+K RP Sbjct: 8 DQLERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSRP 67 Query: 325 EISLPMLDLWKIYTESASTSIVRNFCIVYIEMAFERLPSEEK 450 +I LP+ L Y + A+ S V NF I+Y++M + RLP E++ Sbjct: 68 KIQLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQ 109
>ECM29_HUMAN (Q5VYK3) Proteasome-associated protein ECM29 homolog (Ecm29)| Length = 1845 Score = 80.9 bits (198), Expect = 2e-15 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 1/100 (1%) Frame = +1 Query: 154 LDRMLTRLALAE-DGRLAPLLVRVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEI 330 L+R+ RL AE D +L ++ + LP + +ST VRK ME+L H+NKR+K RP+I Sbjct: 16 LERVFLRLGHAETDEQLQNIISKFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSRPKI 75 Query: 331 SLPMLDLWKIYTESASTSIVRNFCIVYIEMAFERLPSEEK 450 LP+ L Y + A+ S V NF I+Y++M + RLP E++ Sbjct: 76 QLPVETLLVQYQDPAAVSFVTNFTIIYVKMGYPRLPVEKQ 115
>ECM29_PONPY (Q5R6J0) Proteasome-associated protein ECM29 homolog (Ecm29)| (Fragment) Length = 1810 Score = 69.7 bits (169), Expect = 4e-12 Identities = 33/78 (42%), Positives = 49/78 (62%) Frame = +1 Query: 217 RVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEISLPMLDLWKIYTESASTSIVRN 396 + LP + +ST VRK ME+L H+NKR+K P+I LP+ L Y + A+ S V N Sbjct: 3 KFLPPVLLKLSSTQEGVRKKVMELLVHLNKRIKSPPKIQLPVETLLVQYQDPAAVSFVTN 62 Query: 397 FCIVYIEMAFERLPSEEK 450 F I+Y++M + RLP E++ Sbjct: 63 FTIIYVKMGYPRLPVEKQ 80
>ECM29_DROME (Q9V677) Proteasome-associated protein ECM29 homolog| Length = 1890 Score = 55.8 bits (133), Expect = 6e-08 Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 1/102 (0%) Frame = +1 Query: 148 DALDRMLTRLALAE-DGRLAPLLVRVLPYAITSFASTSTSVRKLAMEILSHINKRVKHRP 324 + L+R+L RL A+ D +L + + L I S VR +E+L+HI +R+ R Sbjct: 10 ELLERVLLRLGNADSDEKLEAAVGKFLTPVILKMNSPHNVVRTKVVEVLTHIKRRLSSRG 69 Query: 325 EISLPMLDLWKIYTESASTSIVRNFCIVYIEMAFERLPSEEK 450 + +P+ L Y S++ ++NF I++I M F RL E++ Sbjct: 70 HVQIPVEALLDQYAAQDSSTFLKNFAIIFITMGFPRLALEQQ 111
>YLK1_SCHPO (Q9P7H8) Hypothetical protein C1782.01 in chromosome I| Length = 1679 Score = 38.5 bits (88), Expect = 0.010 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%) Frame = +1 Query: 172 RLALAEDGRLAPLLVRV-LPYAITSFASTSTSVRKLAMEILSHINKRVKHRPEISLPMLD 348 +LALAE LV V L + S SVR + I +HI R+ + + LP+ Sbjct: 15 KLALAESEDSFQSLVSVFLCPILLKLDSPHESVRNKTISIANHIMTRLNNNAQAILPLEA 74 Query: 349 LWKIYTESASTSIVRNFCIVYIEMAFERLPSEEKGTSHLIC-NHISMF 489 L Y E A+ + + F + +I + +R+P E IC NH++ + Sbjct: 75 LVSQYVE-ANQPLRKRFLLAFISIGEKRIPCSENLALLQICLNHVNEY 121
>CLS2_CAEEL (P32744) Kinetochore protein CLASP-2| Length = 1020 Score = 30.4 bits (67), Expect = 2.7 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%) Frame = +1 Query: 160 RMLTRL--ALAEDGRLAPLLVRVLPYAITSFASTSTSVRKLAME-ILSHINK-----RVK 315 +M+TRL L D L+P++ + P I S+ S S++VRK A+ +++ +NK Sbjct: 933 KMMTRLFEGLQAD-ELSPVVDDLAPCVIKSYDSPSSAVRKTAVYCLVAMVNKLGMKTMEP 991 Query: 316 HRPEISLPMLDLWKIYTESASTS 384 H +S L+L ++Y A +S Sbjct: 992 HLQNLSSGKLNLVQVYVNRAMSS 1014
>Y1032_TREPA (O83995) Hypothetical protein TP1032| Length = 144 Score = 29.6 bits (65), Expect = 4.5 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 11/45 (24%) Frame = -1 Query: 109 TAPPSRAA-----------GCCVGLAQSPLVWSLPSGARRKGGAR 8 T+PP+RAA GCCV L + WS R +GGAR Sbjct: 11 TSPPNRAAAARGGRLTLLDGCCVALVLALTAWSGFFVYRMQGGAR 55
>BIRC1_HUMAN (Q13075) Baculoviral IAP repeat-containing protein 1 (Neuronal| apoptosis inhibitory protein) Length = 1403 Score = 29.3 bits (64), Expect = 5.9 Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Frame = +1 Query: 271 KLAMEILSHINKRVKHRPEISLPM---LDLWKIYTESASTSIVRNFCIVYIEMAFE 429 K ++E +S + +KH+PEISL M LW+I ++ + + + ++ ++ A++ Sbjct: 818 KESLENISENDDYLKHQPEISLQMQLLRGLWQICPQAYFSMVSEHLLVLALKTAYQ 873
>SPEB1_SYNY3 (P72703) Agmatinase 1 (EC 3.5.3.11) (Agmatine ureohydrolase 1) (AUH| 1) Length = 306 Score = 29.3 bits (64), Expect = 5.9 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +1 Query: 232 AITSFASTSTSVRKLAMEILSHINKRVKHRPEISLPMLDLWKIYTESASTS 384 AITS+A + V + E + K +H PE L D + Y E TS Sbjct: 19 AITSYADAAVVVVPIPYEATTSYRKGCEHGPEAVLEASDQLEAYDEELGTS 69
>GAP1_CAEEL (Q22720) Ras GTPase-activating protein gap-1 (GTPase-activating| protein 1) Length = 629 Score = 29.3 bits (64), Expect = 5.9 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 19/124 (15%) Frame = +1 Query: 154 LDRMLTRLALAEDGRLAPLLVRVLPYAITSFASTSTSVR------KLAMEILSHINKRVK 315 + R L L +A+ R+ P+L + +I +T R K+ EIL+ K Sbjct: 171 VSRSLVEL-MAQSDRIRPVLSSLYVNSILKCQDENTLFRGQSLSGKMLFEILTTYGKM-- 227 Query: 316 HRPEISLPMLDLWKIYTE-------------SASTSIVRNFCIVYIEMAFERLPSEEKGT 456 + P++D KIY E AS RN +VY +M FER+ + Sbjct: 228 YLITTLKPVVD--KIYKERKNCEVDPARVAVGASLEKNRNNLLVYFQMLFERVTTSSTNC 285 Query: 457 SHLI 468 HLI Sbjct: 286 PHLI 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,661,068 Number of Sequences: 219361 Number of extensions: 764251 Number of successful extensions: 2280 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2261 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2280 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
