Clone Name | bastl50e06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK065453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D11, full insert sequence Length = 3286 Score = 333 bits (168), Expect = 3e-88 Identities = 295/336 (87%), Gaps = 1/336 (0%) Strand = Plus / Plus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 83 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 142 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 143 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 202 Query: 253 acctccacctccgtccgcaagctcgctatggagattctcagccacatcaacaaacgggtg 312 || || | |||||||||||||||| |||||| |||||||||||||| |||||||||||| Sbjct: 203 gccaccgcatccgtccgcaagctcgttatggaaattctcagccacattaacaaacgggtg 262 Query: 313 aagcacaggcctgagatttcgctgcccatgctggatttatggaagatctatactgagtct 372 |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||| Sbjct: 263 aagcacaggcctgagatttcactgcccatgctggatttatggaggatttatactgaatct 322 Query: 373 gcttcaacgtcaattgttcggaacttctgtattgtttatattgagatggcgtttgaacgc 432 |||| | |||| || ||||| || || |||||||||||||||||||| |||||||| Sbjct: 323 acttcctccacaatagtccggaatttttgcattgtttatattgagatggcatttgaacgt 382 Query: 433 ctgccaagcgaggagaagggaa-catcgcacctgat 467 |||| ||| ||||| ||||||| ||| ||||||||| Sbjct: 383 ctgctaagtgaggacaagggaagcatagcacctgat 418
>dbj|AK121066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060D18, full insert sequence Length = 3413 Score = 325 bits (164), Expect = 8e-86 Identities = 294/336 (87%), Gaps = 1/336 (0%) Strand = Plus / Plus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| ||||||||| |||| ||| Sbjct: 121 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcaccgaagac 180 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 181 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 240 Query: 253 acctccacctccgtccgcaagctcgctatggagattctcagccacatcaacaaacgggtg 312 || || | |||||||||||||||| |||||| |||||||||||||| |||||||||||| Sbjct: 241 gccaccgcatccgtccgcaagctcgttatggaaattctcagccacattaacaaacgggtg 300 Query: 313 aagcacaggcctgagatttcgctgcccatgctggatttatggaagatctatactgagtct 372 |||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||| Sbjct: 301 aagcacaggcctgagatttcactgcccatgctggatttatggaggatttatactgaatct 360 Query: 373 gcttcaacgtcaattgttcggaacttctgtattgtttatattgagatggcgtttgaacgc 432 |||| | |||| || ||||| || || |||||||||||||||||||| |||||||| Sbjct: 361 acttcctccacaatagtccggaatttttgcattgtttatattgagatggcatttgaacgt 420 Query: 433 ctgccaagcgaggagaagggaa-catcgcacctgat 467 |||| ||| ||||| ||||||| ||| ||||||||| Sbjct: 421 ctgctaagtgaggacaagggaagcatagcacctgat 456
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Minus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 91473 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 91414 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 91413 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 91354 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 91353 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 91307 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 92025 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 91966 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 91965 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 91906 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 91905 gccaccgcatccgtccgcaagctcg 91881
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Minus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1689960 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 1689901 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 1689900 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 1689841 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 1689840 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 1689794 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 1690509 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 1690450 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 1690449 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 1690390 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 1690389 cccgccgcatccgtccgcaagctcg 1690365
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Minus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1736466 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 1736407 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 1736406 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 1736347 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 1736346 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 1736300 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 1737018 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 1736959 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 1736958 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 1736899 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 1736898 gccaccgcatccgtccgcaagctcg 1736874 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctccg 265 ||||||||||||||||||||| Sbjct: 23417965 tcgcctccacctccacctccg 23417985 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 14397270 tcgcctccacctccacctcc 14397289
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Minus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1734187 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 1734128 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 1734127 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 1734068 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 1734067 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 1734021 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 1734739 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 1734680 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 1734679 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 1734620 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 1734619 gccaccgcatccgtccgcaagctcg 1734595 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctccg 265 ||||||||||||||||||||| Sbjct: 23727875 tcgcctccacctccacctccg 23727895 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 14479271 tcgcctccacctccacctcc 14479290
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Minus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1689938 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 1689879 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 1689878 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 1689819 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 1689818 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 1689772 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Minus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 1690487 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 1690428 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 1690427 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 1690368 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 1690367 cccgccgcatccgtccgcaagctcg 1690343
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Plus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 76961 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 77020 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 77021 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 77080 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 77081 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 77127 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Plus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 76412 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 76471 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 76472 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 76531 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 76532 cccgccgcatccgtccgcaagctcg 76556
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 172 bits (87), Expect = 7e-40 Identities = 147/167 (88%) Strand = Plus / Plus Query: 279 tatggagattctcagccacatcaacaaacgggtgaagcacaggcctgagatttcgctgcc 338 |||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2966 tatggaaattctcagccacattaacaaacgggtgaagcacaggcctgagatttcactgcc 3025 Query: 339 catgctggatttatggaagatctatactgagtctgcttcaacgtcaattgttcggaactt 398 ||||||||||||||||| ||| |||||||| ||| |||| | |||| || ||||| || Sbjct: 3026 catgctggatttatggaggatttatactgaatctacttcctccacaatagtccggaattt 3085 Query: 399 ctgtattgtttatattgagatggcgtttgaacgcctgccaagcgagg 445 || |||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 3086 ttgcattgtttatattgagatggcatttgaacgtctgctaagtgagg 3132 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Plus Query: 133 gacgcggagagggaggacgccctggaccggatgctcacgcgcctggccctcgccgaggac 192 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| ||| Sbjct: 2417 gacgcggagagggaggaggcgctggaccggatgctgacgcggctggccctcgccgaagac 2476 Query: 193 ggccgcctcgcgccgctgctcgtccgcgtgctcccctacgccatcacttccttcgcctcc 252 | || |||||||||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 2477 gcgcggctcgcgccgctgctcgcccgcgtcctcccctacgccatcacctcgctcgcctcc 2536 Query: 253 acctccacctccgtccgcaagctcg 277 || || | |||||||||||||||| Sbjct: 2537 cccgccgcatccgtccgcaagctcg 2561
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 ccttcgcctccacctccacctcc 264 ||||||||||||||||||||||| Sbjct: 14014819 ccttcgcctccacctccacctcc 14014797 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ggagattctcagccacatca 301 |||||||||||||||||||| Sbjct: 18294801 ggagattctcagccacatca 18294820
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 ccttcgcctccacctccacctcc 264 ||||||||||||||||||||||| Sbjct: 24498 ccttcgcctccacctccacctcc 24476
>gb|AC007920.18| Homo sapiens 3 BAC RP11-208N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173534 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 ccttcgcctccacctccacctcc 264 ||||||||||||||||||||||| Sbjct: 104404 ccttcgcctccacctccacctcc 104382
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 ccttcgcctccacctccacctcc 264 ||||||||||||||||||||||| Sbjct: 14009794 ccttcgcctccacctccacctcc 14009772 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ggagattctcagccacatca 301 |||||||||||||||||||| Sbjct: 18288801 ggagattctcagccacatca 18288820
>dbj|AK103387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127I18, full insert sequence Length = 1158 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 ccttcgcctccacctccacctcc 264 ||||||||||||||||||||||| Sbjct: 238 ccttcgcctccacctccacctcc 216
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete sequence Length = 113193 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 ggccctcgccgaggacggccgc 198 |||||||||||||||||||||| Sbjct: 20245 ggccctcgccgaggacggccgc 20266
>emb|CR719601.2|CNS0GI6V Tetraodon nigroviridis full-length cDNA Length = 788 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccgtc 267 |||||||||||||||||||||| Sbjct: 240 cgcctccacctccacctccgtc 219
>emb|CR658119.2|CNS0F6RX Tetraodon nigroviridis full-length cDNA Length = 706 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccgtc 267 |||||||||||||||||||||| Sbjct: 158 cgcctccacctccacctccgtc 137
>emb|AL160410.24| Human DNA sequence from clone RP11-136B8 on chromosome 20 Contains ESs, STSs and GSSs, complete sequence Length = 63090 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 233 ccatcacttccttcgcctccacctcc 258 |||||||||||||| ||||||||||| Sbjct: 10122 ccatcacttccttcccctccacctcc 10097
>gb|AC157362.7| Mus musculus chromosome 1, clone RP23-382H8, complete sequence Length = 212565 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ccctcgccgaggacggccgcct 200 |||||||||||||||||||||| Sbjct: 117408 ccctcgccgaggacggccgcct 117429
>gb|AC118554.2| Homo sapiens chromosome 1 clone RP11-61E2, complete sequence Length = 34319 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 101 cggagccgtcggccgccccgccggccccga 130 |||||| | ||||||||||||||||||||| Sbjct: 30724 cggagcggccggccgccccgccggccccga 30753
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 cctggccctcgccgaggacggc 195 |||||||||||||||||||||| Sbjct: 15868437 cctggccctcgccgaggacggc 15868416 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 22205985 cgcctccacctccacctccg 22205966
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 174 cctggccctcgccgaggacggc 195 |||||||||||||||||||||| Sbjct: 31563 cctggccctcgccgaggacggc 31542
>dbj|AK072369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064J16, full insert sequence Length = 2346 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 174 cctggccctcgccgaggacggc 195 |||||||||||||||||||||| Sbjct: 952 cctggccctcgccgaggacggc 973
>gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, complete sequence Length = 172618 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gatctatactgagtctgcttc 377 ||||||||||||||||||||| Sbjct: 90380 gatctatactgagtctgcttc 90360
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 gccgcctcgcgccgctgctcg 214 ||||||||||||||||||||| Sbjct: 1800203 gccgcctcgcgccgctgctcg 1800223
>ref|NM_013262.3| Homo sapiens myosin regulatory light chain interacting protein (MYLIP), mRNA Length = 3086 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 296 ttcgcctccacctccacctcc 276
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctccg 265 ||||||||||||||||||||| Sbjct: 8625 tcgcctccacctccacctccg 8645
>gb|AC104845.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0091E08, complete sequence Length = 119526 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctccg 265 ||||||||||||||||||||| Sbjct: 33478 tcgcctccacctccacctccg 33498
>gb|AF006004.1| Homo sapiens band 4.1 superfamily member BZF1 (BZF1) gene, complete cds Length = 4460 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 209 ttcgcctccacctccacctcc 189
>gb|AF006003.1| Homo sapiens band 4.1 superfamily member BZF1 (BZF1) mRNA, complete cds Length = 1619 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 209 ttcgcctccacctccacctcc 189
>emb|AL021407.1|HS13D10 Human DNA sequence from clone RP1-13D10 on chromosome 6p22.3-23 Contains the MIR gene for myosin regulatory light chain interacting protein, a mitochondrial 28S ribosomal protein S32 (MRP-S32) pseudogene, a pseudogene similar to part of eukaryotic translation initiation factor 2 subunit 2 (EIF2S2), a P53-induced protein PIGPC1 pseudogene, a malate dehydrogenase pseudogene and a CpG island, complete sequence Length = 153147 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 81137 ttcgcctccacctccacctcc 81157
>emb|X82645.1|HSCHEA H.salinarium cheA gene for histidine kinase Length = 4557 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ccctcgccgaggacggccgcc 199 ||||||||||||||||||||| Sbjct: 2072 ccctcgccgaggacggccgcc 2052
>gb|BT007783.1| Synthetic construct Homo sapiens myosin regulatory light chain interacting protein mRNA, partial cds Length = 1338 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 59 ttcgcctccacctccacctcc 39
>gb|BT007055.1| Homo sapiens myosin regulatory light chain interacting protein mRNA, complete cds Length = 1338 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 59 ttcgcctccacctccacctcc 39
>gb|AF258586.1|AF258586 Homo sapiens PP5242 mRNA, complete cds Length = 1685 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 273 ttcgcctccacctccacctcc 253
>gb|AF212221.1|AF212221 Homo sapiens BM023 mRNA, complete cds Length = 2814 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 211 ttcgcctccacctccacctcc 191
>gb|AF187016.2|AF187016 Homo sapiens myosin regulatory light chain interacting protein MIR mRNA, complete cds Length = 1635 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 233 ttcgcctccacctccacctcc 213
>ref|XM_578974.1| PREDICTED: Rattus norvegicus similar to protein kinase C inhibitor (LOC503433), mRNA Length = 1422 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cctcgccgaggacggccgcct 200 ||||||||||||||||||||| Sbjct: 932 cctcgccgaggacggccgcct 912
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, complete sequence Length = 123580 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 gccctcgccgaggacggccgc 198 ||||||||||||||||||||| Sbjct: 21275 gccctcgccgaggacggccgc 21295
>gb|AY892142.1| Synthetic construct Homo sapiens clone FLH012459.01L myosin regulatory light chain interacting protein (MIR) mRNA, partial cds Length = 1338 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 59 ttcgcctccacctccacctcc 39
>gb|AY889684.1| Synthetic construct Homo sapiens clone FLH012464.01X myosin regulatory light chain interacting protein (MIR) mRNA, complete cds Length = 1338 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 59 ttcgcctccacctccacctcc 39
>gb|AY889683.1| Synthetic construct Homo sapiens clone FLH012463.01X myosin regulatory light chain interacting protein (MIR) mRNA, complete cds Length = 1338 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 59 ttcgcctccacctccacctcc 39
>gb|AE005033.1| Halobacterium sp. NRC-1 section 64 of 170 of the complete genome Length = 12891 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 ccctcgccgaggacggccgcc 199 ||||||||||||||||||||| Sbjct: 8189 ccctcgccgaggacggccgcc 8209
>dbj|AK074391.1| Homo sapiens cDNA FLJ23811 fis, clone HRC08372, highly similar to Homo sapiens myosin regulatory light chain interacting protein MIR mRNA Length = 1709 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 296 ttcgcctccacctccacctcc 276
>gb|BC002860.2| Homo sapiens myosin regulatory light chain interacting protein, mRNA (cDNA clone MGC:4180 IMAGE:3638617), complete cds Length = 1690 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 ttcgcctccacctccacctcc 264 ||||||||||||||||||||| Sbjct: 277 ttcgcctccacctccacctcc 257
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 105 gccgtcggccgccccgccggccccg 129 |||||||||||||||||| |||||| Sbjct: 589946 gccgtcggccgccccgcctgccccg 589922
>dbj|AB051425.1| Verasper moseri mRNA for proopiomelanocortin B, complete cds Length = 956 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 233 ccatcacttccttcgcctccacctccacctccg 265 |||||||||||| ||||| | |||||||||||| Sbjct: 525 ccatcacttcctgcgccttctcctccacctccg 493
>ref|NM_104596.1| Arabidopsis thaliana unknown protein AT1G58150 mRNA, complete cds Length = 276 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 184 cgcctccacctccacctccg 165
>ref|NM_129315.2| Arabidopsis thaliana DNA binding / transcription factor AT2G37590 mRNA, complete cds Length = 1263 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 344 cgcctccacctccacctccg 325
>gb|AC166900.2| Mus musculus chromosome 5, clone wi1-2052H11, complete sequence Length = 38207 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 31570 aggagaagggaacatcgcac 31551
>ref|XM_481555.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 333 cgcctccacctccacctccg 314
>ref|XM_517597.1| PREDICTED: Pan troglodytes similar to Probable serine protease HTRA3 precursor (LOC461681), mRNA Length = 1931 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 1386 cgcctccacctccacctccg 1405
>ref|NM_192729.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3006 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 264 cgcctccacctccacctccg 245
>ref|NM_189710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 724 tcgcctccacctccacctcc 705
>ref|NM_190040.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 263 tcgcctccacctccacctcc 244
>ref|NM_188190.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 374 cgcctccacctccacctccg 355
>gb|BC086425.1| Rattus norvegicus cDNA clone IMAGE:7302013, containing frame-shift errors Length = 1185 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 723 aggagaagggaacatcgcac 742
>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032N11 map near 50283S, complete sequence Length = 139217 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 12104 tcgcctccacctccacctcc 12123
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 142882 tcgcctccacctccacctcc 142901
>ref|XM_586567.2| PREDICTED: Bos taurus similar to leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (LOC509574), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 136 gcggagagggaggacgccctggac 159 ||||||||||||| |||||||||| Sbjct: 767 gcggagagggagggcgccctggac 744
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cggccgccccgccggccccg 129 |||||||||||||||||||| Sbjct: 3793557 cggccgccccgccggccccg 3793538
>ref|XM_416157.1| PREDICTED: Gallus gallus similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) (LOC417916), mRNA Length = 910 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gccgcgcgagatggcggagc 106 |||||||||||||||||||| Sbjct: 391 gccgcgcgagatggcggagc 410
>gb|AE009253.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 23 of 187 of the complete sequence Length = 13802 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cacctccacctccgtccgca 271 |||||||||||||||||||| Sbjct: 6702 cacctccacctccgtccgca 6683
>gb|AE008360.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 164 of 187 of the complete sequence Length = 9160 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cacctccacctccgtccgca 271 |||||||||||||||||||| Sbjct: 2545 cacctccacctccgtccgca 2564
>ref|NM_146165.1| Mus musculus JTV1 gene (Jtv1), mRNA Length = 1072 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 619 aggagaagggaacatcgcac 638
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 ggagattctcagccacatca 301 |||||||||||||||||||| Sbjct: 61232 ggagattctcagccacatca 61251
>ref|XM_744395.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g03540) partial mRNA Length = 2001 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 1015 cgcctccacctccacctccg 996
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cctcgccgaggacggccgcc 199 |||||||||||||||||||| Sbjct: 119385 cctcgccgaggacggccgcc 119366
>gb|BC026972.1| Mus musculus JTV1 gene, mRNA (cDNA clone MGC:36522 IMAGE:5371230), complete cds Length = 1233 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 701 aggagaagggaacatcgcac 720
>gb|BC024410.1| Mus musculus JTV1 gene, mRNA (cDNA clone MGC:36346 IMAGE:4954972), complete cds Length = 1174 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 721 aggagaagggaacatcgcac 740
>gb|BC026958.1| Mus musculus JTV1 gene, mRNA (cDNA clone MGC:30261 IMAGE:4013019), complete cds Length = 1162 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 687 aggagaagggaacatcgcac 706
>gb|DQ446371.1| Arabidopsis thaliana clone pENTR221-At1g58150 hypothetical protein (At1g58150) gene, complete cds Length = 159 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 132 cgcctccacctccacctccg 113
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ccgcctcgcgccgctgctcg 214 |||||||||||||||||||| Sbjct: 2320162 ccgcctcgcgccgctgctcg 2320143
>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13 Length = 349563 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cggccgccccgccggccccg 129 |||||||||||||||||||| Sbjct: 335019 cggccgccccgccggccccg 335000
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cggccgccccgccggccccg 129 |||||||||||||||||||| Sbjct: 19901 cggccgccccgccggccccg 19882
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cggccgccccgccggccccg 129 |||||||||||||||||||| Sbjct: 3950 cggccgccccgccggccccg 3931
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cggccgccccgccggccccg 129 |||||||||||||||||||| Sbjct: 19810 cggccgccccgccggccccg 19791
>gb|BC024480.1| Mus musculus JTV1 gene, mRNA (cDNA clone MGC:37389 IMAGE:4977193), complete cds Length = 1072 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 619 aggagaagggaacatcgcac 638
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 87767 tcgcctccacctccacctcc 87748
>emb|AJ630505.1| Solanum tuberosum partial mRNA for MYC transcription factor (jamyc2 gene) Length = 2302 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cttcgcctccacctccacct 262 |||||||||||||||||||| Sbjct: 1423 cttcgcctccacctccacct 1404
>tpg|BK003122.1| TPA: TPA_inf: Drosophila melanogaster HDC18569 (HDC18569) gene, complete cds Length = 2025 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cctccacctccacctccgtc 267 |||||||||||||||||||| Sbjct: 1930 cctccacctccacctccgtc 1911
>gb|AC109492.2| Homo sapiens chromosome 5 clone RP11-72L22, complete sequence Length = 131782 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 84652 cgcctccacctccacctccg 84671
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185848 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cctccacctccacctccgtc 267 |||||||||||||||||||| Sbjct: 128762 cctccacctccacctccgtc 128781
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 attctcagccacatcaacaa 305 |||||||||||||||||||| Sbjct: 3993843 attctcagccacatcaacaa 3993862
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 25766 cgcctccacctccacctccg 25747
>ref|NM_001037348.1| Rattus norvegicus JTV1 (MGC125271), mRNA Length = 1130 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 661 aggagaagggaacatcgcac 680
>gb|AC092717.2| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR05N10, complete sequence Length = 169600 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttctcagccacatcaacaaa 306 |||||||||||||||||||| Sbjct: 156803 ttctcagccacatcaacaaa 156822
>dbj|AK032508.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430574E03 product:EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA KINASE 1 (EC 2.7.1.-) (HEME-REGULATED EUKARYOTIC INITIATION FACTOR EIF-2-ALPHA KINASE) (HEME-REGULATED INHIBITOR) (HRI) (HEME-CONTROLLED REPRESSOR) (HCR) (HEMIN-SENSITIVE INITIATION FACTOR-2 ALPHA KINASE) homolog [Mus musculus], full insert sequence Length = 2892 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 1782 aggagaagggaacatcgcac 1763
>gb|BC097944.1| Rattus norvegicus cDNA clone IMAGE:7302774, containing frame-shift errors Length = 1187 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 723 aggagaagggaacatcgcac 742
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 168503 tcgcctccacctccacctcc 168484
>gb|AC007173.6|AC007173 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR01A03, complete sequence Length = 155254 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttctcagccacatcaacaaa 306 |||||||||||||||||||| Sbjct: 129889 ttctcagccacatcaacaaa 129908
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttctcagccacatcaacaaa 306 |||||||||||||||||||| Sbjct: 28462 ttctcagccacatcaacaaa 28481
>ref|XM_393252.2| PREDICTED: Apis mellifera similar to CG2989-PA (LOC409759), mRNA Length = 8280 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gcctccacctccacctccgt 266 |||||||||||||||||||| Sbjct: 47 gcctccacctccacctccgt 28
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 33737324 tcgcctccacctccacctcc 33737305
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 13730732 cgcctccacctccacctccg 13730751
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 13155463 cgcctccacctccacctccg 13155444
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ggagattctcagccacatca 301 |||||||||||||||||||| Sbjct: 12691346 ggagattctcagccacatca 12691327
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 41345882 tcgcctccacctccacctcc 41345863 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 40963099 tcgcctccacctccacctcc 40963118 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 24101677 cgcctccacctccacctccg 24101696
>emb|BX820837.1|CNS0A8PT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1314 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 345 cgcctccacctccacctccg 326
>gb|AC154308.3| Mus musculus BAC clone RP23-370E2 from chromosome 16, complete sequence Length = 202348 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tccttcgcctccacctccacctcc 264 |||||| ||||||||||||||||| Sbjct: 136683 tccttctcctccacctccacctcc 136706
>gb|DQ011222.1| Homo sapiens thyroid peroxidase (TPO) gene, complete cds Length = 133236 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 85649 tcgcctccacctccacctcc 85668
>gb|AC079131.4|AC079131 Arabidopsis thaliana chromosome 1 BAC T18I24 genomic sequence, complete sequence Length = 85961 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 19845 cgcctccacctccacctccg 19826
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete sequence Length = 103637 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 92223 cgcctccacctccacctccg 92204
>gb|AC113611.3| Homo sapiens BAC clone RP11-421M20 from 4, complete sequence Length = 60597 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 37198 cgcctccacctccacctccg 37217
>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence Length = 94287 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ggccctcgccgaggacggcc 196 |||||||||||||||||||| Sbjct: 89400 ggccctcgccgaggacggcc 89419
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 37375 tcgcctccacctccacctcc 37356
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 29 tcgcctccacctccacctcc 48
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 91524 tcgcctccacctccacctcc 91543
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 77499 cgcctccacctccacctccg 77518
>gb|AC105450.1| Homo sapiens BAC clone RP11-112B11 from 2, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 46126 tcgcctccacctccacctcc 46107
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 25883 cgcctccacctccacctccg 25864
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 73790 cgcctccacctccacctccg 73771
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 127478 cgcctccacctccacctccg 127459
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ggagattctcagccacatca 301 |||||||||||||||||||| Sbjct: 88405 ggagattctcagccacatca 88386
>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0406D01 Length = 163932 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 44801 cgcctccacctccacctccg 44820
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0086N11 Length = 146185 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 ggagattctcagccacatca 301 |||||||||||||||||||| Sbjct: 39623 ggagattctcagccacatca 39604
>emb|BX004779.16| Zebrafish DNA sequence from clone CH211-14K19 in linkage group 1, complete sequence Length = 196036 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ttctgtattgtttatattga 416 |||||||||||||||||||| Sbjct: 2703 ttctgtattgtttatattga 2684
>dbj|AK120239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044B08, full insert sequence Length = 2699 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 80 tcgcctccacctccacctcc 99
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 147 cgcctccacctccacctccg 166
>dbj|AK072525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D09, full insert sequence Length = 1661 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 318 tcgcctccacctccacctcc 299
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 148 cgcctccacctccacctccg 167
>dbj|AK066099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054G24, full insert sequence Length = 2049 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 29 tcgcctccacctccacctcc 48
>gb|AC108828.17| Mus musculus chromosome 5, clone RP23-153H17, complete sequence Length = 218103 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 233 ccatcacttccttcgcctccacctccacctcc 264 ||||||| |||| | ||||||||||||||||| Sbjct: 197703 ccatcacctcctccacctccacctccacctcc 197672
>dbj|AK060679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C10, full insert sequence Length = 1573 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 281 tcgcctccacctccacctcc 262
>gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67 of 83 of the complete sequence Length = 262745 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 ttctcagccacatcaacaaa 306 |||||||||||||||||||| Sbjct: 230538 ttctcagccacatcaacaaa 230557
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cctccacctccacctccgtc 267 |||||||||||||||||||| Sbjct: 221376 cctccacctccacctccgtc 221357
>dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, section 39/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 205115 cgcctccacctccacctccg 205134
>gb|BC107947.1| Rattus norvegicus JTV1, mRNA (cDNA clone MGC:125271 IMAGE:7386574), complete cds Length = 1130 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 aggagaagggaacatcgcac 462 |||||||||||||||||||| Sbjct: 661 aggagaagggaacatcgcac 680
>gb|M25711.1|HUMTPO11 Human thyroid peroxidase (TPO) gene, exons 12-13 Length = 2512 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 tcgcctccacctccacctcc 264 |||||||||||||||||||| Sbjct: 1871 tcgcctccacctccacctcc 1890
>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete sequence Length = 190641 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 137129 cgcctccacctccacctccg 137148
>dbj|AP001594.1| Homo sapiens genomic DNA, chromosome 21, clone:KB580H10, APP-D21S292 region, complete sequence Length = 100634 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 cgcctccacctccacctccg 265 |||||||||||||||||||| Sbjct: 10551 cgcctccacctccacctccg 10570 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,967,822 Number of Sequences: 3902068 Number of extensions: 3967822 Number of successful extensions: 93673 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91701 Number of HSP's gapped (non-prelim): 1970 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)