ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl50e05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB252152.1| Triticum aestivum Tamyb14 mRNA for myb-related protein, partial cds Length = 304 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 233 ggagcccgacgcccagcgagagcggccgcgaacttagcaccgttaaccagccgtccaact 292 ||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||||| Sbjct: 242 ggagcccgatgcccagcgacagcggccgcgaacgcagcaccgttaaccagctgtccaact 301 Query: 293 ccg 295 ||| Sbjct: 302 ccg 304
>ref|XM_473291.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 77.8 bits (39), Expect = 3e-11 Identities = 100/118 (84%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 318 gtcgtcgacggccgacgacttgagcagcctcac--agtccccggtgcggc-cgtctcgat 374 ||||||| |||||||||||| |||||||||||| || || ||| | ||| || | | | Sbjct: 489 gtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgt 548 Query: 375 ccggctgcacgcgctcgtgctccccaaggtcatgttcgcggactggctcgacatggac 432 ||||| |||||||| |||| ||||||||||||||||||| |||||| ||||||||||| Sbjct: 549 ccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggac 606
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24, complete sequence Length = 121056 Score = 77.8 bits (39), Expect = 3e-11 Identities = 100/118 (84%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 318 gtcgtcgacggccgacgacttgagcagcctcac--agtccccggtgcggc-cgtctcgat 374 ||||||| |||||||||||| |||||||||||| || || ||| | ||| || | | | Sbjct: 53023 gtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgt 53082 Query: 375 ccggctgcacgcgctcgtgctccccaaggtcatgttcgcggactggctcgacatggac 432 ||||| |||||||| |||| ||||||||||||||||||| |||||| ||||||||||| Sbjct: 53083 ccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggac 53140
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 3e-11 Identities = 100/118 (84%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 318 gtcgtcgacggccgacgacttgagcagcctcac--agtccccggtgcggc-cgtctcgat 374 ||||||| |||||||||||| |||||||||||| || || ||| | ||| || | | | Sbjct: 26613465 gtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgt 26613524 Query: 375 ccggctgcacgcgctcgtgctccccaaggtcatgttcgcggactggctcgacatggac 432 ||||| |||||||| |||| ||||||||||||||||||| |||||| ||||||||||| Sbjct: 26613525 ccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggac 26613582 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 1282715 caccgccgccctctccctcc 1282734
>dbj|AK109796.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-E07, full insert sequence Length = 1726 Score = 77.8 bits (39), Expect = 3e-11 Identities = 100/118 (84%), Gaps = 3/118 (2%) Strand = Plus / Minus Query: 318 gtcgtcgacggccgacgacttgagcagcctcac--agtccccggtgcggc-cgtctcgat 374 ||||||| |||||||||||| |||||||||||| || || ||| | ||| || | | | Sbjct: 501 gtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgt 442 Query: 375 ccggctgcacgcgctcgtgctccccaaggtcatgttcgcggactggctcgacatggac 432 ||||| |||||||| |||| ||||||||||||||||||| |||||| ||||||||||| Sbjct: 441 ccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggac 384
>dbj|AK107135.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C09, full insert sequence Length = 1309 Score = 77.8 bits (39), Expect = 3e-11 Identities = 100/118 (84%), Gaps = 3/118 (2%) Strand = Plus / Plus Query: 318 gtcgtcgacggccgacgacttgagcagcctcac--agtccccggtgcggc-cgtctcgat 374 ||||||| |||||||||||| |||||||||||| || || ||| | ||| || | | | Sbjct: 677 gtcgtcgtcggccgacgactcgagcagcctcaccgagcccgcggcggggctcgccgccgt 736 Query: 375 ccggctgcacgcgctcgtgctccccaaggtcatgttcgcggactggctcgacatggac 432 ||||| |||||||| |||| ||||||||||||||||||| |||||| ||||||||||| Sbjct: 737 ccggccgcacgcgcccgtgatccccaaggtcatgttcgccgactggttcgacatggac 794
>ref|XM_466990.1| Oryza sativa (japonica cultivar-group), mRNA Length = 954 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 397 cccaaggtcatgttcgcggactggctcgacatgga 431 ||||||||||||||||||||||||||||||||||| Sbjct: 583 cccaaggtcatgttcgcggactggctcgacatgga 617
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 397 cccaaggtcatgttcgcggactggctcgacatgga 431 ||||||||||||||||||||||||||||||||||| Sbjct: 25780775 cccaaggtcatgttcgcggactggctcgacatgga 25780809 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcctccgcctccgctgcgtcc 138 ||||||||||||||||||||| Sbjct: 9392731 tcctccgcctccgctgcgtcc 9392751 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctctccc 59 |||||||| ||||||||||||||| Sbjct: 13948717 cgccgccccctccctccctctccc 13948694 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 13319096 caccgccgccctctccctcc 13319115 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 6338756 caccgccgccctctccctcc 6338737 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctctcctcttcctccgcctc 128 |||||||||||||||||||| Sbjct: 3453953 ctctcctcttcctccgcctc 3453934
>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0010C01 Length = 186185 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 397 cccaaggtcatgttcgcggactggctcgacatgga 431 ||||||||||||||||||||||||||||||||||| Sbjct: 183451 cccaaggtcatgttcgcggactggctcgacatgga 183485
>dbj|AP004133.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G03 Length = 106401 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 397 cccaaggtcatgttcgcggactggctcgacatgga 431 ||||||||||||||||||||||||||||||||||| Sbjct: 27381 cccaaggtcatgttcgcggactggctcgacatgga 27415
>gb|AY104558.1| Zea mays PCO116495 mRNA sequence Length = 845 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 382 cacgcgctcgtgctccccaaggtcatgttcgcggactggctcgacatggac 432 ||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 528 cacgcgcccgtgccgcccaaggtcatgttcgcggactggctggacatggac 578
>gb|AC131912.6| Mus musculus chromosome 9, clone RP24-164A20, complete sequence Length = 204724 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 ccgccctctccctccctctccc 59 |||||||||||||||||||||| Sbjct: 2058 ccgccctctccctccctctccc 2037
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 gctcgacatggacatggacatg 441 |||||||||||||||||||||| Sbjct: 1320858 gctcgacatggacatggacatg 1320879
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 34 accgccgccctctccctccctctccc 59 |||||||||| ||||||||||||||| Sbjct: 19904047 accgccgcccactccctccctctccc 19904022 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccctccctctcccagatctag 67 ||||||||||||||||||||| Sbjct: 24890832 ccctccctctcccagatctag 24890852 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 ctcctcttcctccgcctccgctgcgtcc 138 |||||||||||||||||| ||| ||||| Sbjct: 24149861 ctcctcttcctccgcctcggctccgtcc 24149834
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 34 accgccgccctctccctccctctccc 59 |||||||||| ||||||||||||||| Sbjct: 171092 accgccgcccactccctccctctccc 171067
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 34 accgccgccctctccctccctctccc 59 |||||||||| ||||||||||||||| Sbjct: 42387 accgccgcccactccctccctctccc 42362
>gb|AE004973.1| Halobacterium sp. NRC-1 section 4 of 170 of the complete genome Length = 11221 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 313 gagtcgtcgtcgacggccgacg 334 |||||||||||||||||||||| Sbjct: 6676 gagtcgtcgtcgacggccgacg 6655
>emb|CT572989.7| Mouse DNA sequence from clone RP24-176J14 on chromosome 9, complete sequence Length = 168760 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 38 ccgccctctccctccctctccc 59 |||||||||||||||||||||| Sbjct: 66956 ccgccctctccctccctctccc 66935
>dbj|AK063382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-G03, full insert sequence Length = 2250 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 34 accgccgccctctccctccctctccc 59 |||||||||| ||||||||||||||| Sbjct: 189 accgccgcccactccctccctctccc 164
>ref|NM_184187.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2242 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgct 132 |||||||||||||||| |||||||| Sbjct: 75 cctctcctcttcctcctcctccgct 51
>ref|XM_507164.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1734_E04.12 mRNA Length = 1820 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 172 ctcctcttcctccgcctccgc 192
>ref|XM_480624.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1820 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 172 ctcctcttcctccgcctccgc 192
>ref|XM_477664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 ctcttcctccgcctccgctgc 134 ||||||||||||||||||||| Sbjct: 130 ctcttcctccgcctccgctgc 110
>gb|AC134046.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040G18, complete sequence Length = 172281 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccctccctctcccagatctag 67 ||||||||||||||||||||| Sbjct: 90213 ccctccctctcccagatctag 90193
>gb|AY724516.1| Rattus norvegicus clone UI-R-FJ0-cpy-j-20-0-UI unknown mRNA Length = 3486 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tcttcctccgcctccgctgcg 135 ||||||||||||||||||||| Sbjct: 323 tcttcctccgcctccgctgcg 303
>gb|AY560864.1| Arabidopsis thaliana putative AP2/EREBP transcription factor (At5g43410) mRNA, complete cds Length = 396 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 tcctcttcctccgcctccgct 132 ||||||||||||||||||||| Sbjct: 271 tcctcttcctccgcctccgct 291
>ref|NM_007658.3| Mus musculus cell division cycle 25 homolog A (S. cerevisiae) (Cdc25a), mRNA Length = 3643 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tcttcctccgcctccgctgcg 135 ||||||||||||||||||||| Sbjct: 378 tcttcctccgcctccgctgcg 358
>gb|AC154675.2| Mus musculus BAC clone RP23-143J5 from chromosome 14, complete sequence Length = 207264 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 ccctctccctccctctcccagatct 65 |||||||||||||||||||| |||| Sbjct: 148433 ccctctccctccctctcccacatct 148409
>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence Length = 279112 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ccctctccctccctctcccag 61 ||||||||||||||||||||| Sbjct: 235940 ccctctccctccctctcccag 235920
>gb|AC108044.5| Homo sapiens BAC clone RP11-280E3 from 4, complete sequence Length = 173834 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 ccctccctctcccagatctag 67 ||||||||||||||||||||| Sbjct: 39625 ccctccctctcccagatctag 39605
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgccctctccctccctctccc 59 ||||||||||||||||||||| Sbjct: 2173072 cgccctctccctccctctccc 2173052
>dbj|AK077991.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030497P19 product:M-PHASE INDUCER PHOSPHATASE 1 (EC 3.1.3.48) (DUAL SPECIFICITY PHOSPHATASE CDC25A) homolog [Mus musculus], full insert sequence Length = 2922 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tcttcctccgcctccgctgcg 135 ||||||||||||||||||||| Sbjct: 379 tcttcctccgcctccgctgcg 359
>tpg|BK000136.1| TPA: TPA_exp: Zea mays putative phytosulfokine peptide precursor (PSK4) mRNA, partial cds Length = 423 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 153 cctcgccctcctctgtctcctcatcctcc 181 ||||||||||||||| |||||| |||||| Sbjct: 138 cctcgccctcctctgcctcctcctcctcc 166
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccctccctctcccagatctag 67 ||||||||||||||||||||| Sbjct: 4560331 ccctccctctcccagatctag 4560351 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 27674155 caccgccgccctctccctcc 27674136
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 6266041 ctcctcttcctccgcctccgc 6266061 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||||||||||||| |||| Sbjct: 22085862 cctctcctcttcctccgccgccgc 22085839 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 2514448 caccgccgccctctccctcc 2514429
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ctcttcctccgcctccgctgc 134 ||||||||||||||||||||| Sbjct: 12654312 ctcttcctccgcctccgctgc 12654332
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgct 132 |||||||||||||||| |||||||| Sbjct: 1412911 cctctcctcttcctcctcctccgct 1412887
>gb|AC104695.2| Homo sapiens BAC clone RP11-373D23 from 2, complete sequence Length = 157665 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 tcctccgcctccgctgcgtccggct 142 |||||||||||||||||||| |||| Sbjct: 12230 tcctccgcctccgctgcgtctggct 12206
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcctccgcctccgctgcgtcc 138 ||||||||||||||||||||| Sbjct: 6292 tcctccgcctccgctgcgtcc 6312
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgct 132 |||||||||||||||| |||||||| Sbjct: 110962 cctctcctcttcctcctcctccgct 110938
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccctccctctcccagatctag 67 ||||||||||||||||||||| Sbjct: 101915 ccctccctctcccagatctag 101935
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ctcttcctccgcctccgctgc 134 ||||||||||||||||||||| Sbjct: 28782 ctcttcctccgcctccgctgc 28802
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcctccgcctccgctgcgtcc 138 ||||||||||||||||||||| Sbjct: 152985 tcctccgcctccgctgcgtcc 153005
>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1734_E04 Length = 101439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 52178 ctcctcttcctccgcctccgc 52198
>dbj|AK121927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106G21, full insert sequence Length = 2242 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgct 132 |||||||||||||||| |||||||| Sbjct: 75 cctctcctcttcctcctcctccgct 51
>dbj|AK120546.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M01, full insert sequence Length = 1819 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 171 ctcctcttcctccgcctccgc 191
>dbj|AK108310.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-F10, full insert sequence Length = 858 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 193 ctcctcttcctccgcctccgc 213
>dbj|AK103596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133E02, full insert sequence Length = 1740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 ctcttcctccgcctccgctgc 134 ||||||||||||||||||||| Sbjct: 130 ctcttcctccgcctccgctgc 110
>dbj|AK073315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026B10, full insert sequence Length = 1819 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 ctcctcttcctccgcctccgc 131 ||||||||||||||||||||| Sbjct: 171 ctcctcttcctccgcctccgc 191
>dbj|AK072028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105K02, full insert sequence Length = 1418 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 tcctccgcctccgctgcgtcc 138 ||||||||||||||||||||| Sbjct: 198 tcctccgcctccgctgcgtcc 178
>emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chromosome 16, complete sequence Length = 241451 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ccctctccctccctctcccag 61 ||||||||||||||||||||| Sbjct: 2379 ccctctccctccctctcccag 2359
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ccctccctctcccagatctag 67 ||||||||||||||||||||| Sbjct: 4581580 ccctccctctcccagatctag 4581600 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 27698143 caccgccgccctctccctcc 27698124
>gb|AC154415.3| Mus musculus BAC clone RP24-232A21 from chromosome 16, complete sequence Length = 177893 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ccctctccctccctctcccag 61 ||||||||||||||||||||| Sbjct: 19081 ccctctccctccctctcccag 19061
>emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, complete sequence Length = 137155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctc 128 ||||||||||||||||||||| Sbjct: 39826 cctctcctcttcctccgcctc 39806
>dbj|AB017481.2| Heterosigma akashiwo mRNA for Na-ATPase, complete cds Length = 3993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 gtctcctcatcctccacgtcc 187 ||||||||||||||||||||| Sbjct: 3188 gtctcctcatcctccacgtcc 3168
>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0044F08 Length = 141528 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgct 132 |||||||||||||||| |||||||| Sbjct: 62532 cctctcctcttcctcctcctccgct 62508
>gb|AC119205.8| Mus musculus chromosome 5, clone RP24-188M1, complete sequence Length = 170550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gccctctccctccctctccc 59 |||||||||||||||||||| Sbjct: 20093 gccctctccctccctctccc 20074
>gb|AC154901.1| Prunus persica (peach) BAC clone 82I18, complete sequence Length = 73299 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ccctcctctgtctcctcatcctcc 181 ||||||||| |||||||||||||| Sbjct: 32627 ccctcctctttctcctcatcctcc 32650
>gb|AC132941.21| Mus musculus chromosome 18, clone RP23-163E22, complete sequence Length = 182073 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcc 178 |||||||||||||||||||| Sbjct: 139542 cctcctctgtctcctcatcc 139523
>gb|AY834277.1| Homo sapiens B7 isoform (B7) mRNA, complete cds, alternatively spliced Length = 671 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 94 agtcctccccctcctctgtctcct 71
>ref|XM_507250.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1117_F10.6 mRNA Length = 3919 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||||||||||||| |||| Sbjct: 552 cctctcctcttcctccgccgccgc 575
>ref|XM_508974.1| PREDICTED: Pan troglodytes similar to leucine-rich B7 protein isoform 1 (LOC451802), mRNA Length = 1032 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 94 agtcctccccctcctctgtctcct 71
>ref|XM_471080.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4203 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 4200 caccgccgccctctccctcc 4181
>ref|XM_464615.1| Oryza sativa (japonica cultivar-group), mRNA Length = 240 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 104 caccgccgccctctccctcc 85
>ref|XM_450899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||| |||||||||||||| Sbjct: 1104 cctctcctcctcctccgcctccgc 1127
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 cctctccctccctctcccagatct 65 |||| ||||||||||||||||||| Sbjct: 118400 cctcaccctccctctcccagatct 118423
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cgcaccgaggccgaggcgcg 210 |||||||||||||||||||| Sbjct: 1597640 cgcaccgaggccgaggcgcg 1597621
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 47818 caccgccgccctctccctcc 47837
>gb|AC102096.11| Mus musculus chromosome 18, clone RP23-37J18, complete sequence Length = 180965 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcc 178 |||||||||||||||||||| Sbjct: 14144 cctcctctgtctcctcatcc 14125
>gb|AC132484.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0038E22, complete sequence Length = 150766 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 82628 caccgccgccctctccctcc 82647
>gb|AC135361.3| Mus musculus BAC clone RP23-216A21 from chromosome 14, complete sequence Length = 203946 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ccctcctctgtctcctcatcctcc 181 ||||||||||||||||| |||||| Sbjct: 160345 ccctcctctgtctcctcctcctcc 160368
>ref|XM_953859.1| Neurospora crassa OR74A hypothetical protein (NCU09713.1) partial mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 242 gacatggacatggacatggg 261
>ref|XM_330362.1| Neurospora crassa OR74A hypothetical protein (NCU09713.1) partial mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 242 gacatggacatggacatggg 261
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 52600 caccgccgccctctccctcc 52581
>gb|AC145070.10| Mus musculus chromosome 5, clone RP23-41I11, complete sequence Length = 180113 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gccctctccctccctctccc 59 |||||||||||||||||||| Sbjct: 154814 gccctctccctccctctccc 154795
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence Length = 179157 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcc 178 |||||||||||||||||||| Sbjct: 173438 cctcctctgtctcctcatcc 173419
>ref|NM_176662.1| Bos taurus protein kinase C substrate 80K-H (PRKCSH), mRNA Length = 2099 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcctccacgtc 186 |||||||||||||||| |||||| |||| Sbjct: 1124 cctcctctgtctcctcgtcctcctcgtc 1097
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence Length = 170753 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cctcctctgtctcctcatcc 178 |||||||||||||||||||| Sbjct: 14893 cctcctctgtctcctcatcc 14912
>gb|AC131920.7| Mus musculus chromosome 14, clone RP23-450N9, complete sequence Length = 201436 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 88024 gacatggacatggacatggg 88043
>gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, complete sequence Length = 184091 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 62566 gacatggacatggacatggg 62547
>gb|AC140113.3| Homo sapiens PAC clone RP1-85D24 from Y, complete sequence Length = 155655 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gccctctccctccctctccc 59 |||||||||||||||||||| Sbjct: 126759 gccctctccctccctctccc 126778
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 ccctctccctccctctcccagatc 64 ||||||||||||| |||||||||| Sbjct: 34299 ccctctccctccccctcccagatc 34322
>gb|AF299077.1| Bos taurus vacuolar system associated protein-60 (VASAP-60) gene, promoter region and complete cds Length = 14392 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcctccacgtc 186 |||||||||||||||| |||||| |||| Sbjct: 12027 cctcctctgtctcctcgtcctcctcgtc 12000
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 13583 caccgccgccctctccctcc 13602
>gb|AC127335.4| Mus musculus BAC clone RP23-150G24 from 8, complete sequence Length = 215910 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 ctctcctcttcctccgcctccgct 132 ||||||||||||||| |||||||| Sbjct: 111712 ctctcctcttcctccccctccgct 111689
>gb|AC122865.3| Mus musculus BAC clone RP23-143B2 from 8, complete sequence Length = 201139 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctctccctccctctcccaga 62 |||||||||||||||||||| Sbjct: 163110 ctctccctccctctcccaga 163091
>gb|AC116572.3| Mus musculus BAC clone RP23-101D16 from 14, complete sequence Length = 199090 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 158 ccctcctctgtctcctcatcctcc 181 ||||||||||||||||| |||||| Sbjct: 109742 ccctcctctgtctcctcctcctcc 109765
>gb|U49178.2|BTU49178 Bos taurus vacuolar system associated protein-60 mRNA, complete cds Length = 2099 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcctccacgtc 186 |||||||||||||||| |||||| |||| Sbjct: 1124 cctcctctgtctcctcgtcctcctcgtc 1097
>ref|XM_536504.2| PREDICTED: Canis familiaris similar to Brix domain containing protein 2 (Ribosome biogenesis protein Brix) (LOC479365), mRNA Length = 1300 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctctcctcttcctccgcctc 128 |||||||||||||||||||| Sbjct: 392 ctctcctcttcctccgcctc 373
>emb|CR649113.2|CNS0EZTR Tetraodon nigroviridis full-length cDNA Length = 493 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 209 gacatggacatggacatggg 228 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 185 gacatggacatggacatggg 204
>emb|CR646077.2|CNS0EXHF Tetraodon nigroviridis full-length cDNA Length = 544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 260 gacatggacatggacatggg 279
>emb|CR645138.2|CNS0EWRC Tetraodon nigroviridis full-length cDNA Length = 513 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 233 gacatggacatggacatggg 252
>emb|CR643542.2|CNS0EVJ0 Tetraodon nigroviridis full-length cDNA Length = 544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 260 gacatggacatggacatggg 279
>ref|NM_023964.1| Rattus norvegicus glyceraldehyde-3-phosphate dehydrogenase, spermatogenic (Gapdhs), mRNA Length = 1450 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 97 gacatggacatggacatggg 78
>ref|NM_201650.1| Homo sapiens leucine rich repeat containing 23 (LRRC23), transcript variant 1, mRNA Length = 1595 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 259 agtcctccccctcctctgtctcct 236
>ref|NM_006992.2| Homo sapiens leucine rich repeat containing 23 (LRRC23), transcript variant 2, mRNA Length = 1281 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 259 agtcctccccctcctctgtctcct 236
>gb|BC029858.1| Homo sapiens leucine rich repeat containing 23, mRNA (cDNA clone MGC:34414 IMAGE:5170643), complete cds Length = 1632 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 287 agtcctccccctcctctgtctcct 264
>gb|AC101711.7| Mus musculus, clone RP23-279K17, complete sequence Length = 174802 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 20772 gacatggacatggacatggg 20791
>emb|AL606609.2|OSJN00064 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K24, complete sequence Length = 121799 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 62681 caccgccgccctctccctcc 62700
>emb|CR942276.1| Human DNA sequence from clone XX-NCIH2171_5AM21, complete sequence Length = 110743 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 91002 agtcctccccctcctctgtctcct 90979
>emb|AJ303456.1|RNO303456 Rattus norvegicus mRNA for WASP interacting protein (wip gene) Length = 3797 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ctcctcttcctccgcctccgctgc 134 |||||| ||||||||||||||||| Sbjct: 238 ctcctcctcctccgcctccgctgc 215
>emb|AJ297631.1|RNO297631 Rattus norvegicus mRNA for glyceraldehyde-3-phosphate dehydrogenase type 2 (gapdh-2 gene) Length = 1450 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gacatggacatggacatggg 443 |||||||||||||||||||| Sbjct: 97 gacatggacatggacatggg 78
>gb|AC073531.22| Homo sapiens 12 BAC RP11-802J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212172 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cctctccctccctctcccag 61 |||||||||||||||||||| Sbjct: 120908 cctctccctccctctcccag 120889
>gb|BC072475.1| Rattus norvegicus Wiskott-Aldrich syndrome protein interacting protein, mRNA (cDNA clone MGC:91527 IMAGE:7100751), complete cds Length = 3968 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ctcctcttcctccgcctccgctgc 134 |||||| ||||||||||||||||| Sbjct: 405 ctcctcctcctccgcctccgctgc 382
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ctccctctcccagatctaga 68 |||||||||||||||||||| Sbjct: 105618 ctccctctcccagatctaga 105599
>emb|CR595324.1| full-length cDNA clone CS0DJ015YK05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1381 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 225 agtcctccccctcctctgtctcct 202
>emb|CR590063.1| full-length cDNA clone CS0DL012YL19 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1268 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 572 agtcctccccctcctctgtctcct 549
>dbj|AB201309.1| uncultured crenarchaeote 10-H-08 genomic DNA, Fosmid clone No.10-H-08 Length = 41202 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttgatctggagcccgacgcc 245 |||||||||||||||||||| Sbjct: 14880 ttgatctggagcccgacgcc 14899
>ref|NM_142371.1| Drosophila melanogaster CG14330-RA (CG14330), mRNA Length = 4797 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 cgacatggacatggacatgg 442 |||||||||||||||||||| Sbjct: 1410 cgacatggacatggacatgg 1391
>dbj|AB168408.1| Macaca fascicularis testis cDNA clone: QtsA-11919, similar to human B7 gene (B7), transcript variant 1, mRNA, RefSeq: NM_201650.1 Length = 1769 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 238 agtcctccccctcctctgtctcct 215
>gb|BC014450.1| Homo sapiens leucine rich repeat containing 23, mRNA (cDNA clone IMAGE:4854844), with apparent retained intron Length = 1091 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 180 agtcctccccctcctctgtctcct 157
>gb|BC104524.1| Bos taurus protein kinase C substrate 80K-H, mRNA (cDNA clone MGC:129131 IMAGE:8122210), complete cds Length = 2114 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 159 cctcctctgtctcctcatcctccacgtc 186 |||||||||||||||| |||||| |||| Sbjct: 1110 cctcctctgtctcctcgtcctcctcgtc 1083
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gtcgtcgtcgacggccgacg 334 |||||||||||||||||||| Sbjct: 2190521 gtcgtcgtcgacggccgacg 2190502
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ctccctctcccagatctaga 68 |||||||||||||||||||| Sbjct: 15251919 ctccctctcccagatctaga 15251900
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||| |||||||||||||| Sbjct: 13577864 cctctcctcctcctccgcctccgc 13577841 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 1484550 caccgccgccctctccctcc 1484531
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 21335278 caccgccgccctctccctcc 21335259 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 9719536 caccgccgccctctccctcc 9719555 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 cctctccctccctctcccagatct 65 |||| ||||||||||||||||||| Sbjct: 3920513 cctcaccctccctctcccagatct 3920536
>gb|AC007804.6|AC007804 Drosophila melanogaster, chromosome 3R, region 90A-90B, BAC clone BACR29H07, complete sequence Length = 175440 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cgacatggacatggacatgg 442 |||||||||||||||||||| Sbjct: 75431 cgacatggacatggacatgg 75450
>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence Length = 176316 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 333 cgccgccctctccctccctc 314 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 301 cgccgccctctccctccctc 282
>dbj|AK223535.1| Homo sapiens mRNA for leucine-rich B7 protein isoform 1 variant, clone: FCC124H12 Length = 1587 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 248 agtcctccccctcctctgtctcct 225
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence Length = 222930 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 117737 agtcctccccctcctctgtctcct 117714
>ref|NM_057192.2| Rattus norvegicus Wiskott-Aldrich syndrome protein interacting protein (Waspip), mRNA Length = 3968 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ctcctcttcctccgcctccgctgc 134 |||||| ||||||||||||||||| Sbjct: 405 ctcctcctcctccgcctccgctgc 382
>ref|XM_223273.3| PREDICTED: Rattus norvegicus protein phosphatase, EF hand calcium-binding domain 2 (predicted) (Ppef2_predicted), mRNA Length = 2382 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cgccctcctctgtctcctcatcct 179 ||||||||||||||||| |||||| Sbjct: 424 cgccctcctctgtctccacatcct 401
>gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complete sequence Length = 179937 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cctctccctccctctcccag 61 |||||||||||||||||||| Sbjct: 47147 cctctccctccctctcccag 47128
>gb|AC156599.2| Laccaria bicolor clone JGIAHZW-3X, complete sequence Length = 44441 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 acatggacatggacatggga 444 |||||||||||||||||||| Sbjct: 30483 acatggacatggacatggga 30502
>gb|AC116614.6| Homo sapiens BAC clone CTD-2029L3 from 2, complete sequence Length = 129814 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 128612 cgccgccctctccctccctc 128593 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 128580 cgccgccctctccctccctc 128561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 128548 cgccgccctctccctccctc 128529 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 128516 cgccgccctctccctccctc 128497 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctc 55 |||||||||||||||||||| Sbjct: 128416 cgccgccctctccctccctc 128397
>gb|AC003665.1|AC003665 Homo sapiens chromosome 17, clone hCIT.211_P_7, complete sequence Length = 145528 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cctctccctccctctcccag 61 |||||||||||||||||||| Sbjct: 5807 cctctccctccctctcccag 5826
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 136143 caccgccgccctctccctcc 136124
>dbj|AP005770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0065F08 Length = 144091 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctctccc 59 |||||||| ||||||||||||||| Sbjct: 120615 cgccgccccctccctccctctccc 120592
>dbj|AP004180.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B05 Length = 117057 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 36 cgccgccctctccctccctctccc 59 |||||||| ||||||||||||||| Sbjct: 18355 cgccgccccctccctccctctccc 18332
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 ctcctcttcctccgcctccgctgcgtcc 138 |||||||||||||||||| ||| ||||| Sbjct: 83319 ctcctcttcctccgcctcggctccgtcc 83292
>dbj|AP005526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0571B09 Length = 147382 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 28805 caccgccgccctctccctcc 28786
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 102663 caccgccgccctctccctcc 102644
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||| |||||||||||||| Sbjct: 15280 cctctcctcctcctccgcctccgc 15257
>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1661_C12 Length = 122214 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctctcctcttcctccgcctc 128 |||||||||||||||||||| Sbjct: 66776 ctctcctcttcctccgcctc 66757
>dbj|AP007149.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa018M17 Length = 36758 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||| |||||||||||||| Sbjct: 25850 cctctcctcctcctccgcctccgc 25827
>dbj|AP005746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0018I03 Length = 145818 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 12794 caccgccgccctctccctcc 12775
>dbj|AP005506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665F09 Length = 147102 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 76077 caccgccgccctctccctcc 76058
>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0622F08 Length = 140628 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 127023 caccgccgccctctccctcc 127042
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 44347 caccgccgccctctccctcc 44366
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||||||||||||| |||| Sbjct: 48825 cctctcctcttcctccgccgccgc 48802
>dbj|AK119988.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-G03, full insert sequence Length = 865 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gctcgcgcctctcctcttcctccg 124 ||||||||||||||||||| |||| Sbjct: 76 gctcgcgcctctcctcttcgtccg 53
>dbj|AK105580.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E04, full insert sequence Length = 1605 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||| |||||||||||||| Sbjct: 833 cctctcctcctcctccgcctccgc 856
>dbj|AK072484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C09, full insert sequence Length = 2538 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ctctcctcttcctccgcctc 128 |||||||||||||||||||| Sbjct: 259 ctctcctcttcctccgcctc 240
>dbj|AK069069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A21, full insert sequence Length = 945 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 caccgccgccctctccctcc 52 |||||||||||||||||||| Sbjct: 313 caccgccgccctctccctcc 332
>dbj|AK067357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099I15, full insert sequence Length = 3919 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 cctctcctcttcctccgcctccgc 131 ||||||||||||||||||| |||| Sbjct: 552 cctctcctcttcctccgccgccgc 575
>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the complete sequence Length = 217725 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 423 cgacatggacatggacatgg 442 |||||||||||||||||||| Sbjct: 207182 cgacatggacatggacatgg 207201
>gb|U72510.1|HSU72510 Human alternatively spliced B9 (B7) mRNA, partial sequence Length = 461 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 206 agtcctccccctcctctgtctcct 183
>gb|U72508.1|HSU72508 Human B7 mRNA, complete cds Length = 1208 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 agtcctcgccctcctctgtctcct 173 ||||||| |||||||||||||||| Sbjct: 206 agtcctccccctcctctgtctcct 183
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ctccctctcccagatctaga 68 |||||||||||||||||||| Sbjct: 15260160 ctccctctcccagatctaga 15260141
>gb|U95037.1|DVU95037 Drosophila decapentaplegic disk regulatory region: SLY1 homolog (Slh) and out at first (oaf) genes, complete cds Length = 21877 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 cgacatggacatggacatgg 442 |||||||||||||||||||| Sbjct: 1571 cgacatggacatggacatgg 1552
>emb|AL935172.8| Mouse DNA sequence from clone RP23-261J24 on chromosome 11, complete sequence Length = 142614 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 tctgtctcctcatcctccac 183 |||||||||||||||||||| Sbjct: 102621 tctgtctcctcatcctccac 102602
>gb|AC164875.14| Mus musculus chromosome 1, clone RP23-59P14, complete sequence Length = 250957 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccctctccctccctctccca 60 |||||||||||||||||||| Sbjct: 34903 ccctctccctccctctccca 34922 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,198,935 Number of Sequences: 3902068 Number of extensions: 4198935 Number of successful extensions: 150009 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 147736 Number of HSP's gapped (non-prelim): 2273 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
