Clone Name | bastl50e02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt... | 30 | 3.5 |
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>RM03_MOUSE (Q99N95) Mitochondrial 39S ribosomal protein L3 (L3mt) (MRP-L3)| Length = 348 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +1 Query: 289 ASDAASVFRCSARSPGADPGGERRRGWDALFHDAFQGAVRRWSEYV 426 A A V C AR GADPG ERR+ + + W E++ Sbjct: 8 AQAGARVLGCGARGLGADPGLERRKNILFFVRNLHSKSSTWWDEHL 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.130 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,692,256 Number of Sequences: 219361 Number of extensions: 388099 Number of successful extensions: 1781 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1734 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1779 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)