>ref|XM_493838.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3060

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 378 atgtcggtagccaagaaggatgaggtttgcgggcatccgcttggactgcgattgggtgag 437
           |||||||||||||||||||| ||||||||| | |||| ||| || | |||||||| ||||
Sbjct: 1   atgtcggtagccaagaaggaagaggtttgcagtcatcggctcgggccgcgattggatgag 60

                
Query: 438 ccggc 442
           |||||
Sbjct: 61  ccggc 65

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 375     aagatgtcggtagccaagaaggatgaggt 403
               ||||||||||||||||||||||| |||||
Sbjct: 9656851 aagatgtcggtagccaagaaggaagaggt 9656823

>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 375   aagatgtcggtagccaagaaggatgaggt 403
             ||||||||||||||||||||||| |||||
Sbjct: 77750 aagatgtcggtagccaagaaggaagaggt 77722

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 375     aagatgtcggtagccaagaaggatgaggt 403
               ||||||||||||||||||||||| |||||
Sbjct: 9654972 aagatgtcggtagccaagaaggaagaggt 9654944

>gb|AC104930.9| Mus musculus chromosome 7, clone RP24-224C21, complete sequence
          Length = 156052

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 252   gcctgcacacaccctccccttc 273
             ||||||||||||||||||||||
Sbjct: 58193 gcctgcacacaccctccccttc 58214

>gb|AC114678.20| Mus musculus chromosome 10, clone RP24-213L12, complete sequence
          Length = 180079

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 69    ctccatccctccctctcgctcg 90
             ||||||||||||||||||||||
Sbjct: 28164 ctccatccctccctctcgctcg 28185

>gb|AC167719.2| Mus musculus BAC clone RP24-285I8 from chromosome 10, complete sequence
          Length = 180573

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 69    ctccatccctccctctcgctcg 90
             ||||||||||||||||||||||
Sbjct: 45877 ctccatccctccctctcgctcg 45856

>gb|AC155930.3| Mus musculus BAC clone RP23-412K9 from chromosome 7, complete
            sequence
          Length = 187418

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 252  gcctgcacacaccctccccttc 273
            ||||||||||||||||||||||
Sbjct: 9031 gcctgcacacaccctccccttc 9010

>gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome 1, complete sequence
          Length = 174750

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 69    ctccatccctccctctcgctcggtctgcc 97
             |||| |||||||||||| |||||||||||
Sbjct: 57484 ctccttccctccctctctctcggtctgcc 57512

>emb|AL160280.10| Human DNA sequence from clone RP11-66O21 on chromosome 9, complete
             sequence
          Length = 109031

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 252   gcctgcacacaccctcccctt 272
             |||||||||||||||||||||
Sbjct: 38688 gcctgcacacaccctcccctt 38708

>gb|AC147475.3| Mus musculus BAC clone RP23-161B8 from 1, complete sequence
          Length = 186580

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 69     ctccatccctccctctcgctcggtctgcc 97
              |||| |||||||||||| |||||||||||
Sbjct: 168480 ctccttccctccctctctctcggtctgcc 168508

>ref|XM_874222.1| PREDICTED: Bos taurus similar to protein kinase, DNA-activated,
            catalytic polypeptide, transcript variant 7 (LOC512740),
            mRNA
          Length = 13274

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  ctccccttcttctccagcct 284
            ||||||||||||||||||||
Sbjct: 5089 ctccccttcttctccagcct 5108

>ref|XM_864754.1| PREDICTED: Bos taurus similar to protein kinase, DNA-activated,
            catalytic polypeptide, transcript variant 5 (LOC512740),
            mRNA
          Length = 13256

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  ctccccttcttctccagcct 284
            ||||||||||||||||||||
Sbjct: 5089 ctccccttcttctccagcct 5108

>ref|XM_874041.1| PREDICTED: Bos taurus similar to protein kinase, DNA-activated,
            catalytic polypeptide, transcript variant 6 (LOC512740),
            mRNA
          Length = 13166

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  ctccccttcttctccagcct 284
            ||||||||||||||||||||
Sbjct: 5089 ctccccttcttctccagcct 5108

>ref|XM_590310.2| PREDICTED: Bos taurus similar to protein kinase, DNA-activated,
            catalytic polypeptide, transcript variant 4 (LOC512740),
            mRNA
          Length = 13259

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  ctccccttcttctccagcct 284
            ||||||||||||||||||||
Sbjct: 5089 ctccccttcttctccagcct 5108

>gb|AC125235.3| Mus musculus BAC clone RP23-23D1 from chromosome 8, complete sequence
          Length = 191753

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    tgctgtgctgagtgggtgcc 195
              ||||||||||||||||||||
Sbjct: 162632 tgctgtgctgagtgggtgcc 162613

>ref|XM_847168.1| PREDICTED: Canis familiaris similar to melanoma-derived leucine
            zipper, extra-nuclear factor (LOC609825), mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  gcctgctagctgctgcagca 300
            ||||||||||||||||||||
Sbjct: 1899 gcctgctagctgctgcagca 1880

>gb|AC132366.4| Mus musculus BAC clone RP23-461N12 from chromosome 7, complete sequence
          Length = 183964

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    tggctggagagggactggtg 131
              ||||||||||||||||||||
Sbjct: 176110 tggctggagagggactggtg 176091

>gb|AC125348.3| Mus musculus BAC clone RP23-377H20 from chromosome 7, complete sequence
          Length = 188610

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   tggctggagagggactggtg 131
             ||||||||||||||||||||
Sbjct: 27920 tggctggagagggactggtg 27901

>emb|AL355535.14| Human DNA sequence from clone RP11-494N1 on chromosome 9 Contains the
            5' end of the GNA14 gene for guanine nucleotide binding
            protein (G protein) alpha 14, the 3' end of the GNAQ gene
            for guanine nucleotide binding protein (G protein) q
            polypeptide and two CpG islands, complete sequence
          Length = 186658

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  gagggctgctgtgctgagtg 189
            ||||||||||||||||||||
Sbjct: 9773 gagggctgctgtgctgagtg 9792

>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat
              shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a
              novel gene and a ribosomal protein L21 (RPL21) pseudogene,
              complete sequence
          Length = 197634

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    agccaagaaggatgaggttt 405
              ||||||||||||||||||||
Sbjct: 142539 agccaagaaggatgaggttt 142558

>emb|AJ001038.1|MMMPROT Mus musculus mRNA for M-protein
          Length = 5074

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tgctgtgctgagtgggtgcc 195
            ||||||||||||||||||||
Sbjct: 4548 tgctgtgctgagtgggtgcc 4567

>ref|NM_008664.1| Mus musculus myomesin 2 (Myom2), mRNA
          Length = 5074

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tgctgtgctgagtgggtgcc 195
            ||||||||||||||||||||
Sbjct: 4548 tgctgtgctgagtgggtgcc 4567

>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence
          Length = 191756

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ggatctccatccctccctct 84
              ||||||||||||||||||||
Sbjct: 114936 ggatctccatccctccctct 114955

>gb|AC098686.11| Bos taurus clone rp42-146c17, complete sequence
          Length = 164686

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   ggatctccatccctccctct 84
            ||||||||||||||||||||
Sbjct: 6597 ggatctccatccctccctct 6578

>dbj|AK142174.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330005G22 product:myomesin 2, full insert
            sequence
          Length = 4928

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tgctgtgctgagtgggtgcc 195
            ||||||||||||||||||||
Sbjct: 4524 tgctgtgctgagtgggtgcc 4543

>gb|AF039717.2| Caenorhabditis elegans cosmid R13H8, complete sequence
          Length = 19120

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  caccctccccttcttctcca 280
            ||||||||||||||||||||
Sbjct: 8828 caccctccccttcttctcca 8847

>gb|AY752935.1| Equus caballus insulin-like growth factor binding protein-6
           (IGFBP-6) mRNA, partial cds
          Length = 262

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 agctgctgcagcactgagtc 307
           ||||||||||||||||||||
Sbjct: 168 agctgctgcagcactgagtc 149

>gb|AY609440.1| Sus scrofa clone Clu_115877.scr.msk.p1.Contig1, mRNA sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 170 gagggctgctgtgctgagtgggtg 193
           |||||| |||||||||||||||||
Sbjct: 977 gagggcagctgtgctgagtgggtg 954

>gb|CP000207.1| Drosophila melanogaster genomic scaffold 211000022280721
          Length = 230078

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   ctgctagctgctgcagcact 302
             ||||||||||||||||||||
Sbjct: 63803 ctgctagctgctgcagcact 63822


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,650,067
Number of Sequences: 3902068
Number of extensions: 3650067
Number of successful extensions: 81175
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81025
Number of HSP's gapped (non-prelim): 150
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)