ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl50d07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3121 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 161 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 220 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 221 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 280 Query: 349 ccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||||||||||| || |||||||| ||||| ||||| || | Sbjct: 281 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 340 Query: 409 agcctctgaagttcctccgcccacactatggaac 442 |||| ||||| |||||||| |||||||||||||| Sbjct: 341 agccactgaaattcctccggccacactatggaac 374 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 66 agccatggcgccgcccgagaaccccaacg 94
>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA Length = 3169 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 168 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 227 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 228 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 287 Query: 349 ccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||||||||||| || |||||||| ||||| ||||| || | Sbjct: 288 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 347 Query: 409 agcctctgaagttcctccgcccacactatggaac 442 |||| ||||| |||||||| |||||||||||||| Sbjct: 348 agccactgaaattcctccggccacactatggaac 381 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 73 agccatggcgccgcccgagaaccccaacg 101
>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full insert sequence Length = 3120 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 160 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 219 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 220 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 279 Query: 349 ccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||||||||||| || |||||||| ||||| ||||| || | Sbjct: 280 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 339 Query: 409 agcctctgaagttcctccgcccacactatggaac 442 |||| ||||| |||||||| |||||||||||||| Sbjct: 340 agccactgaaattcctccggccacactatggaac 373 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 65 agccatggcgccgcccgagaaccccaacg 93
>dbj|AK119490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-D03, full insert sequence Length = 1533 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 221 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 280 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 281 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 340 Query: 349 ccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||||||||||| || |||||||| ||||| ||||| || | Sbjct: 341 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 400 Query: 409 agcctctgaagttcctccgcccacactatggaac 442 |||| ||||| |||||||| |||||||||||||| Sbjct: 401 agccactgaaattcctccggccacactatggaac 434 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 126 agccatggcgccgcccgagaaccccaacg 154
>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full insert sequence Length = 3169 Score = 266 bits (134), Expect = 6e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctcaagg 288 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 168 ggaagaagaaggacgagaagaaggatgacgatctgtcggaggaggatttggcgctcaagg 227 Query: 289 agcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagaggctcg 348 |||||||||| |||||||| || ||||||||||||| ||||||||||||||||| ||||| Sbjct: 228 agcagctcgagctctacgtggttcgggcgcaggacgcggatcccggcgtgcagaagctcg 287 Query: 349 ccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtcccca 408 | || ||||| |||||||||||||||||||| || |||||||| ||||| ||||| || | Sbjct: 288 cgcttgagagtatgaggcaggagattcgttccgccacaagctcaatgacatctgtaccaa 347 Query: 409 agcctctgaagttcctccgcccacactatggaac 442 |||| ||||| |||||||| |||||||||||||| Sbjct: 348 agccactgaaattcctccggccacactatggaac 381 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 73 agccatggcgccgcccgagaaccccaacg 101
>ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3092 Score = 256 bits (129), Expect = 6e-65 Identities = 195/217 (89%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctc 284 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 206 aaggggaagaagaaggatgagaacaaggacgacgacctgtcggaggaggaccaggcgctc 265 Query: 285 aaggagcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagagg 344 |||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||| | Sbjct: 266 aaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaag 325 Query: 345 ctcgccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtc 404 ||||||||||||||||||||||||||||| ||||| || ||||| || ||||| |||||| Sbjct: 326 ctcgccctcgagagcatgaggcaggagatccgttctgcgacaagttcaatgacctctgtc 385 Query: 405 cccaagcctctgaagttcctccgcccacactatggaa 441 || |||||||| || ||||| ||||| |||||||||| Sbjct: 386 ccaaagcctctcaaattccttcgcccgcactatggaa 422
>dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J12, full insert sequence Length = 3091 Score = 256 bits (129), Expect = 6e-65 Identities = 195/217 (89%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaaggacgacgatctgtcggaggaggacctggcgctc 284 ||||||||||||||||| ||||| ||||||||||| |||||||||||||||| ||||||| Sbjct: 205 aaggggaagaagaaggatgagaacaaggacgacgacctgtcggaggaggaccaggcgctc 264 Query: 285 aaggagcagctcgaactctacgtcgtgcgggcgcaggacgtggatcccggcgtgcagagg 344 |||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||| | Sbjct: 265 aaggagcagctcgagctctacgtggtgcgggcgcaggaccccgatcccggcgtccagaag 324 Query: 345 ctcgccctcgagagcatgaggcaggagattcgttcagctacaagctcgatgacgtctgtc 404 ||||||||||||||||||||||||||||| ||||| || ||||| || ||||| |||||| Sbjct: 325 ctcgccctcgagagcatgaggcaggagatccgttctgcgacaagttcaatgacctctgtc 384 Query: 405 cccaagcctctgaagttcctccgcccacactatggaa 441 || |||||||| || ||||| ||||| |||||||||| Sbjct: 385 ccaaagcctctcaaattccttcgcccgcactatggaa 421
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 9567848 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 9567907 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 9567908 ccccgatcccggcgtccagaagctcgccctcgagagcatgagg 9567950 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||| ||||| || ||||| || ||||| |||||||| |||||||| || ||| Sbjct: 9568525 aggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattc 9568584 Query: 423 ctccgcccacactatggaa 441 || ||||| |||||||||| Sbjct: 9568585 cttcgcccgcactatggaa 9568603 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||||||| ||||| ||||||||||| Sbjct: 9567728 aaggggaagaagaaggatgagaacaaggacgacga 9567762
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Minus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 28915268 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 28915209 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 28915208 caccgatcccggcgtccagaagctcgccctcgagagcatgagg 28915166 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||| ||||| || ||||| || ||||| |||||||| |||||||| || ||| Sbjct: 28914531 aggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattc 28914472 Query: 423 ctccgcccacactatggaac 442 || ||||| ||||||||||| Sbjct: 28914471 cttcgcccgcactatggaac 28914452 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||||||| ||||||||||||||||| Sbjct: 28915392 aaggggaagaagaaggatgagaagaaggacgacga 28915358
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Minus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 65312 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 65253 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 65252 caccgatcccggcgtccagaagctcgccctcgagagcatgagg 65210 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||| ||||| || ||||| || ||||| |||||||| |||||||| || ||| Sbjct: 64575 aggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattc 64516 Query: 423 ctccgcccacactatggaac 442 || ||||| ||||||||||| Sbjct: 64515 cttcgcccgcactatggaac 64496 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||||||| ||||||||||||||||| Sbjct: 65436 aaggggaagaagaaggatgagaagaaggacgacga 65402
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 7945 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 8004 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 8005 ccccgatcccggcgtccagaagctcgccctcgagagcatgagg 8047 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||| ||||| || ||||| || ||||| |||||||| |||||||| || ||| Sbjct: 8622 aggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattc 8681 Query: 423 ctccgcccacactatggaa 441 || ||||| |||||||||| Sbjct: 8682 cttcgcccgcactatggaa 8700 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||||||| ||||| ||||||||||| Sbjct: 7825 aaggggaagaagaaggatgagaacaaggacgacga 7859
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 141 bits (71), Expect = 3e-30 Identities = 95/103 (92%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 131484 gtcggaggaggaccaggcgctcaaggagcagctcgagctctacgtggtgcgggcgcagga 131543 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 | ||||||||||| |||| |||||||||||||||||||||| Sbjct: 131544 ccccgatcccggcgtccagaagctcgccctcgagagcatgagg 131586 Score = 69.9 bits (35), Expect = 8e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||| ||||| || ||||| || ||||| |||||||| |||||||| || ||| Sbjct: 132161 aggcaggagatccgttctgcgacaagttcaatgacctctgtcccaaagcctctcaaattc 132220 Query: 423 ctccgcccacactatggaa 441 || ||||| |||||||||| Sbjct: 132221 cttcgcccgcactatggaa 132239 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaaggacgacga 259 ||||||||||||||||| ||||| ||||||||||| Sbjct: 131364 aaggggaagaagaaggatgagaacaaggacgacga 131398
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 2564030 gtcggaggaggatttggcgctcaaggagcagctcgagctctacgtggttcgggcgcagga 2564089 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 || ||||||||||||||||| |||||| || ||||| |||||| Sbjct: 2564090 cgcggatcccggcgtgcagaagctcgcgcttgagagtatgagg 2564132 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||||||||| || |||||||| ||||| ||||| || ||||| ||||| ||| Sbjct: 2564373 aggcaggagattcgttccgccacaagctcaatgacatctgtaccaaagccactgaaattc 2564432 Query: 423 ctccgcccacactatggaac 442 ||||| |||||||||||||| Sbjct: 2564433 ctccggccacactatggaac 2564452 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctg 263 ||||||||||||||||||||||||| ||||||||| Sbjct: 2563864 ggaagaagaaggacgagaagaaggatgacgatctg 2563898 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 2563769 agccatggcgccgcccgagaaccccaacg 2563797
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 125 bits (63), Expect = 1e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 263 gtcggaggaggacctggcgctcaaggagcagctcgaactctacgtcgtgcgggcgcagga 322 |||||||||||| |||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 42813 gtcggaggaggatttggcgctcaaggagcagctcgagctctacgtggttcgggcgcagga 42872 Query: 323 cgtggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 || ||||||||||||||||| |||||| || ||||| |||||| Sbjct: 42873 cgcggatcccggcgtgcagaagctcgcgcttgagagtatgagg 42915 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 363 aggcaggagattcgttcagctacaagctcgatgacgtctgtccccaagcctctgaagttc 422 ||||||||||||||||| || |||||||| ||||| ||||| || ||||| ||||| ||| Sbjct: 43156 aggcaggagattcgttccgccacaagctcaatgacatctgtaccaaagccactgaaattc 43215 Query: 423 ctccgcccacactatggaac 442 ||||| |||||||||||||| Sbjct: 43216 ctccggccacactatggaac 43235 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaaggacgacgatctg 263 ||||||||||||||||||||||||| ||||||||| Sbjct: 42647 ggaagaagaaggacgagaagaaggatgacgatctg 42681 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 agccatgtcgccgcccgagaaccccaacg 156 ||||||| ||||||||||||||||||||| Sbjct: 42552 agccatggcgccgcccgagaaccccaacg 42580
>ref|XM_955705.1| Neurospora crassa OR74A hypothetical protein (NCU08931.1) partial mRNA Length = 1479 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1406 agaagaaggacgagaagaaggacga 1430 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1394 agaagaaggacgagaagaaggacga 1418 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1382 agaagaaggacgagaagaaggacga 1406 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1370 agaagaaggacgagaagaaggacga 1394 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1358 agaagaaggacgagaagaaggacga 1382 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1346 agaagaaggacgagaagaaggacga 1370 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1334 agaagaaggacgagaagaaggacga 1358 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1322 agaagaaggacgagaagaaggacga 1346 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1310 agaagaaggacgagaagaaggacga 1334 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1298 agaagaaggacgagaagaaggacga 1322 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1286 agaagaaggacgagaagaaggacga 1310 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1274 agaagaaggacgagaagaaggacga 1298 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1262 agaagaaggacgagaagaaggacga 1286 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1250 agaagaaggacgagaagaaggacga 1274 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 1240 aagaaggacgagaagaaggacga 1262
>ref|XM_331322.1| Neurospora crassa OR74A hypothetical protein (NCU08931.1) partial mRNA Length = 1479 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1406 agaagaaggacgagaagaaggacga 1430 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1394 agaagaaggacgagaagaaggacga 1418 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1382 agaagaaggacgagaagaaggacga 1406 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1370 agaagaaggacgagaagaaggacga 1394 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1358 agaagaaggacgagaagaaggacga 1382 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1346 agaagaaggacgagaagaaggacga 1370 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1334 agaagaaggacgagaagaaggacga 1358 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1322 agaagaaggacgagaagaaggacga 1346 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1310 agaagaaggacgagaagaaggacga 1334 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1298 agaagaaggacgagaagaaggacga 1322 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1286 agaagaaggacgagaagaaggacga 1310 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1274 agaagaaggacgagaagaaggacga 1298 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1262 agaagaaggacgagaagaaggacga 1286 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 1250 agaagaaggacgagaagaaggacga 1274 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 1240 aagaaggacgagaagaaggacga 1262
>gb|AC121151.11| Mus musculus chromosome 17, clone RP24-342C2, complete sequence Length = 205467 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||||||||||| Sbjct: 116790 aaggggaagaagaaggaggagaagaagga 116818
>ref|XM_734059.1| Plasmodium chabaudi chabaudi ran binding protein 1 (PC301359.00.0) partial mRNA Length = 795 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 446 agaagaaggacgagaagaaggacga 470 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 458 agaagaaggacgagaagaagga 479
>emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cosmid contig 20H10 Length = 96283 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29333 agaagaaggacgagaagaaggacga 29357 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29321 agaagaaggacgagaagaaggacga 29345 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29309 agaagaaggacgagaagaaggacga 29333 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29297 agaagaaggacgagaagaaggacga 29321 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29285 agaagaaggacgagaagaaggacga 29309 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29273 agaagaaggacgagaagaaggacga 29297 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29261 agaagaaggacgagaagaaggacga 29285 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29249 agaagaaggacgagaagaaggacga 29273 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29237 agaagaaggacgagaagaaggacga 29261 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29225 agaagaaggacgagaagaaggacga 29249 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29213 agaagaaggacgagaagaaggacga 29237 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29201 agaagaaggacgagaagaaggacga 29225 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29189 agaagaaggacgagaagaaggacga 29213 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||||||||||||| Sbjct: 29177 agaagaaggacgagaagaaggacga 29201 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 29167 aagaaggacgagaagaaggacga 29189
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacga 259 |||| |||||||||||||||||||||||| Sbjct: 69857 aagacgaaggacgagaagaaggacgacga 69885
>dbj|AB046415.1| Oryza sativa eIF4A-2 gene for eukaryotic initiation factor 4A, complete cds Length = 6767 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 325 tggatcccggcgtgcagaggctcgccctcgagagcatgagg 365 |||||||||||||||||| |||||| || ||||| |||||| Sbjct: 6487 tggatcccggcgtgcagaagctcgcgcttgagagtatgagg 6527
>ref|XM_656176.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3664.2), mRNA Length = 1551 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaaggacga 256 |||||||||||| |||||||||||||| Sbjct: 1203 gaagaagaaggaagagaagaaggacga 1229 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 ||||||||||||||| ||||||||| Sbjct: 1217 agaagaaggacgagaggaaggacga 1241
>gb|AC024838.1| Caenorhabditis elegans cosmid Y59E9AL, complete sequence Length = 24330 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacgacgat 260 ||||||||||| ||||||||||||||| Sbjct: 18420 aagaaggacgaaaagaaggacgacgat 18394 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 14799 aagaaggacgacaagaaggacgac 14776
>emb|Z81048.1|CEC41G7 Caenorhabditis elegans Cosmid C41G7, complete sequence Length = 29021 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 18106 aagaaggacgagaagaaggacga 18084 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 18040 aagaaggacgacaagaaggacgac 18017
>emb|AL137860.22| Human DNA sequence from clone RP4-633N17 on chromosome 1p34.1-34.3 Contains the 3' end of the SLC9A1 gene for solute carrier family 9 (sodium/hydrogen exchanger), isoform 1 (antiporter, Na+/H+, amiloride sensitive) and a CpG island, complete sequence Length = 121010 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaag 251 ||||||||||||||||| ||||||||| Sbjct: 68382 aaggggaagaagaaggaggagaagaag 68408
>ref|XM_774922.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog), transcript variant 1 (LOC575334), mRNA Length = 1057 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 226 aggggaagaagaaggacgagaagaaggacga 256 |||| ||||||||||| |||||||||||||| Sbjct: 924 agggcaagaagaaggaggagaagaaggacga 954 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 942 agaagaaggacgagaagaagga 963
>ref|XM_796612.1| PREDICTED: Strongylocentrotus purpuratus similar to 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog), transcript variant 2 (LOC575334), mRNA Length = 1027 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 226 aggggaagaagaaggacgagaagaaggacga 256 |||| ||||||||||| |||||||||||||| Sbjct: 894 agggcaagaagaaggaggagaagaaggacga 924 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 912 agaagaaggacgagaagaagga 933
>emb|AJ720760.1| Gallus gallus partial mRNA for hypothetical protein, clone 24p12 Length = 652 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 393 atgacgtctgtccccaagcctctgaagttcctccgcccacactatgg 439 ||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 312 atgacctccgtccccaagcccctcaagttcctccgaccgcactatgg 358
>emb|AJ719640.1| Gallus gallus mRNA for hypothetical protein, clone 4n15 Length = 2933 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 393 atgacgtctgtccccaagcctctgaagttcctccgcccacactatgg 439 ||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 330 atgacctccgtccccaagcccctcaagttcctccgaccgcactatgg 376
>ref|NM_001012934.1| Gallus gallus proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 (PSMD2), mRNA Length = 2933 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 393 atgacgtctgtccccaagcctctgaagttcctccgcccacactatgg 439 ||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 330 atgacctccgtccccaagcccctcaagttcctccgaccgcactatgg 376
>ref|NM_068344.2| Caenorhabditis elegans Y59E9AL.6 (Y59E9AL.6) mRNA, complete cds Length = 695 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgacgat 260 ||||||||||| ||||||||||||||| Sbjct: 378 aagaaggacgaaaagaaggacgacgat 404
>ref|NM_060130.2| Caenorhabditis elegans C41G7.6 (C41G7.6) mRNA, complete cds Length = 768 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacga 256 ||||||||||||||||||||||| Sbjct: 313 aagaaggacgagaagaaggacga 335 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 379 aagaaggacgacaagaaggacgac 402
>ref|XM_324199.1| Neurospora crassa OR74A predicted protein (NCU04843.1) partial mRNA Length = 972 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 425 agaagaaggacgagaagaagga 446
>ref|XM_955309.1| Neurospora crassa OR74A hypothetical protein (NCU04843.1) partial mRNA Length = 972 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaagga 253 |||||||||||||||||||||| Sbjct: 425 agaagaaggacgagaagaagga 446
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacga 256 |||||||||||||||||||||| Sbjct: 73068 agaaggacgagaagaaggacga 73089
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacga 256 |||||||||||||||||||||| Sbjct: 73440 agaaggacgagaagaaggacga 73461
>gb|AY122623.1| Diplonema papillatum strain ATCC 50162 heat shock protein 90 (HSP-90) gene, partial cds Length = 1948 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgacga 259 |||||||||||||||||||| ||||| Sbjct: 605 aagaaggacgagaagaaggaagacga 630
>ref|NM_127618.2| Arabidopsis thaliana unknown protein AT2G20580 mRNA, complete cds Length = 3043 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 286 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 330
>gb|AC164549.4| Mus musculus BAC clone RP24-273K1 from chromosome 16, complete sequence Length = 182658 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 10897 aaggagaagaagaaggaggagaagaagga 10869
>gb|AC160992.2| Mus musculus BAC clone RP23-147I23 from chromosome 9, complete sequence Length = 215980 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 95448 aaggagaagaagaaggaggagaagaagga 95476
>ref|XM_960457.1| Neurospora crassa OR74A hypothetical protein (NCU01919.1) partial mRNA Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaag 251 ||||||||||||||||||||| Sbjct: 1198 aagaagaaggacgagaagaag 1218
>gb|AY230828.1| Arabidopsis thaliana 26S proteasome subunit RPN1a (RPN1a) mRNA, complete cds Length = 2891 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 169 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 213
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaagga 253 ||||||||||||| ||||||||||| Sbjct: 47413 ggaagaagaaggaggagaagaagga 47437
>ref|XM_956737.1| Neurospora crassa OR74A hypothetical protein (NCU05265.1) partial mRNA Length = 2910 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 ggcgtgcagaggctcgccctcgaga 357 |||| |||||||||||||||||||| Sbjct: 1671 ggcgagcagaggctcgccctcgaga 1647
>ref|XM_324621.1| Neurospora crassa OR74A hypothetical protein (NCU05265.1) partial mRNA Length = 2910 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 ggcgtgcagaggctcgccctcgaga 357 |||| |||||||||||||||||||| Sbjct: 1671 ggcgagcagaggctcgccctcgaga 1647
>ref|XM_329108.1| Neurospora crassa OR74A hypothetical protein (NCU01919.1) partial mRNA Length = 1647 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaag 251 ||||||||||||||||||||| Sbjct: 1198 aagaagaaggacgagaagaag 1218
>gb|AC163095.6| Mus musculus chromosome 18, clone RP23-208G10, complete sequence Length = 181707 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 ggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||||||| Sbjct: 170848 ggaagaagaaggacgaggagaagga 170824
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 |||||||||||||||| |||||||| Sbjct: 74198 agaagaaggacgagaaaaaggacga 74222
>gb|AC125400.4| Mus musculus BAC clone RP24-380E10 from chromosome 10, complete sequence Length = 154681 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 84317 aaggagaagaagaaggaggagaagaagga 84345 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 84148 aaggagaagaagaaggaggagaagaagga 84176
>gb|AC126457.3| Mus musculus BAC clone RP23-68E6 from 16, complete sequence Length = 147585 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 83408 aaggagaagaagaaggaggagaagaagga 83380
>emb|BX053478.1|CNS09DFE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC31AF05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 912 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 agaaggacgagaagaaggacgacga 259 ||||||| ||||||||||||||||| Sbjct: 756 agaaggaggagaagaaggacgacga 732
>emb|BX015293.1|CNS08JYP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23AA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 943 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacgacga 259 ||||||| ||||||||||||||||| Sbjct: 877 agaaggaggagaagaaggacgacga 901
>emb|BX009540.1|CNS08FIW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA15BG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 938 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 agaaggacgagaagaaggacgacga 259 ||||||| ||||||||||||||||| Sbjct: 382 agaaggaggagaagaaggacgacga 358
>gb|AY040061.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2 (At2g20580) mRNA, complete cds Length = 2676 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 85 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 129
>gb|AF360216.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2 (At2g20580) mRNA, complete cds Length = 3041 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggacgacgatctgtcggaggaggac 275 ||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 286 aagaagaaggacgagaaaaaggatgaggatttgtctgaagaggac 330
>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence Length = 221749 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacga 256 |||||||||| |||||||||||||| Sbjct: 166306 agaagaaggaggagaagaaggacga 166330
>gb|AC069368.14| Homo sapiens chromosome 15, clone CTD-2017F17, complete sequence Length = 132080 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 17756 aaggggaagaagaaggaggaggagaagga 17784
>gb|AC154805.2| Mus musculus BAC clone RP24-511O23 from chromosome 14, complete sequence Length = 151445 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 17281 aaggagaagaagaaggaggagaagaagga 17309
>gb|AC004659.1|AC004659 Homo sapiens chromosome 19, CIT-HSP-87m17 BAC clone, complete sequence Length = 129577 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||| ||||||| Sbjct: 52396 aaggggaagaagaaggaggaggagaagga 52424
>gb|AC004806.2| Homo sapiens 12 BAC RP11-360E11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131027 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||||||||| |||||| ||||||||||| Sbjct: 121761 aaggggaagaggaaggaggagaagaagga 121789
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggac 254 ||||||||||||||||||||| Sbjct: 1569800 aagaaggacgagaagaaggac 1569820
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 231 aagaagaaggacgagaagaaggacg 255 ||||||||||||| ||||||||||| Sbjct: 2532680 aagaagaaggacgggaagaaggacg 2532656
>emb|BX323086.4| Zebrafish DNA sequence from clone DKEY-170I11 in linkage group 20, complete sequence Length = 183026 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 ggaagaagaaggacgagaagaagga 253 |||||||||||||| |||||||||| Sbjct: 135501 ggaagaagaaggacaagaagaagga 135477
>gb|AC090977.48| Mus musculus strain C57BL/6J clone rp23-213m14 map 16, complete sequence Length = 208412 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 190867 aaggagaagaagaaggaggagaagaagga 190839
>gb|AC008109.6|AC008109 Homo sapiens chromosome 18, clone RP11-476K15, complete sequence Length = 166819 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 150689 aaggagaagaagaaggaggagaagaagga 150717
>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11, complete sequence Length = 202364 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 ggaagaagaaggacgagaagaagga 253 |||||||||||||| |||||||||| Sbjct: 173302 ggaagaagaaggacaagaagaagga 173278
>gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, complete sequence Length = 169528 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 ggaagaagaaggacgagaagaagga 253 ||||||||||||||||| ||||||| Sbjct: 82183 ggaagaagaaggacgaggagaagga 82159
>gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, complete sequence Length = 167801 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 83683 aaggagaagaagaaggaggagaagaagga 83655
>emb|CT030635.8| Mouse DNA sequence from clone RP23-94N7 on chromosome 9, complete sequence Length = 228508 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 220528 aaggagaagaagaaggaggagaagaagga 220556
>dbj|AP005119.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-288C17, complete sequences Length = 143259 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 225 aaggggaagaagaaggacgagaagaagga 253 |||| |||||||||||| ||||||||||| Sbjct: 110462 aaggagaagaagaaggaggagaagaagga 110434
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 16893 gaagaagaaggaggagaagaagga 16916
>gb|AC168116.3| Mus musculus BAC clone RP24-108N24 from chromosome 1, complete sequence Length = 158847 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 aggggaagaagaaggacgagaagaagga 253 ||||| |||||||||| ||||||||||| Sbjct: 6846 agggggagaagaaggaggagaagaagga 6873
>ref|NM_197514.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.18), mRNA Length = 540 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 224 agaagaaggaggagaagaaggacg 247
>gb|AF491966.1| Pegoscapus hoffmeyeri A microsatellite Pe3 sequence Length = 584 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 58 gaagaagaaggatgagaagaagga 81
>gb|AC113050.9| Mus musculus chromosome 1, clone RP23-250O14, complete sequence Length = 207359 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gaatctgagctaaagagtac 489 |||||||||||||||||||| Sbjct: 133156 gaatctgagctaaagagtac 133137
>gb|AC119986.7| Mus musculus chromosome 14, clone RP24-502B4, complete sequence Length = 170418 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 aagaagaaggacgagaagaaggac 254 |||||||||||| ||||||||||| Sbjct: 140619 aagaagaaggacaagaagaaggac 140642
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 aggacgagaagaaggacgac 257 |||||||||||||||||||| Sbjct: 82557 aggacgagaagaaggacgac 82576
>gb|AY391259.1| Perkinsus marinus heat shock protein 90 gene, partial cds Length = 1877 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 225 aaggggaagaagaaggacgagaagaaggacga 256 |||| ||||||| | ||||||||||||||||| Sbjct: 738 aaggagaagaaggatgacgagaagaaggacga 769
>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence Length = 199083 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 aggggaagaagaaggacgagaagaagga 253 ||||| |||||||||| ||||||||||| Sbjct: 120150 agggggagaagaaggaggagaagaagga 120177
>gb|AC122929.4| Mus musculus BAC clone RP23-12A18 from chromosome 6, complete sequence Length = 252503 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 172742 gaagaagaaggaggagaagaagga 172765
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 3091 gaagaagaaggaggagaagaagga 3114
>gb|AC122390.4| Mus musculus BAC clone RP24-80O9 from chromosome 10, complete sequence Length = 218880 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 345 ctcgccctcgagagcatgaggcaggaga 372 |||||||||||||| |||||||||||| Sbjct: 125919 ctcgccctcgagaggctgaggcaggaga 125946
>gb|U50312.2| Caenorhabditis elegans cosmid B0222, complete sequence Length = 40535 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cggagatcctccagaaaata 30 |||||||||||||||||||| Sbjct: 21694 cggagatcctccagaaaata 21675
>gb|AF368526.4| Lyngbya majuscula CCAP 1446/4 HypB (hypB), HypA (hypA), HypE (hypE), hypothetical protein, 4-oxalocrotonate tautomerase, HypD (hypD), hypothetical protein, HypC (hypC), HypF (hypF), hypothetical proteins, and HupS (hupS) genes, complete cds; hupS-hupL intergenic spacer, complete sequence; HupL (hupL), hypothetical protein, and HupW (hupW) genes, complete cds; and hypothetical protein gene, partial cds Length = 21201 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaaggacgac 257 ||||||||||| |||||||||||| Sbjct: 8546 aagaaggacgacaagaaggacgac 8569
>emb|Z82215.1|HS68O2 Human DNA sequence from clone RP1-68O2 on chromosome 22 Contains the 5' end of the APOL2 gene for apolipoprotein L 2, the APOL gene for apolipoprotein L, the MYH9 gene for nonmuscle type myosin heavy chain 9. ESTs, STSs and GSSs, complete sequence Length = 139389 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cggagatcctccagaaaataaacc 34 |||| ||||||||||||||||||| Sbjct: 3903 cggaaatcctccagaaaataaacc 3926
>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete sequence Length = 117273 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 ccctcgagagcatgaggcaggagattcg 376 |||||||||| |||||||||||||||| Sbjct: 3763 ccctcgagaggctgaggcaggagattcg 3736
>ref|XM_505790.1| Yarrowia lipolytica CLIB122, YALI0F23485g predicted mRNA Length = 2049 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 1995 gaagaagaaggaggagaagaagga 2018
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 agccagcccgccagcgccgtcgcc 108 ||||||||||||||||| |||||| Sbjct: 893140 agccagcccgccagcgcggtcgcc 893117
>ref|XM_795475.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC589829 (LOC589829), partial mRNA Length = 2201 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggac 254 |||||||||||||||||||| Sbjct: 1964 agaaggacgagaagaaggac 1983
>ref|XM_969777.1| PREDICTED: Tribolium castaneum similar to mindbomb homolog 1 (LOC663742), mRNA Length = 3081 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggacgagaagaaggacgacg 258 |||||||||||||||||||| Sbjct: 1926 ggacgagaagaaggacgacg 1945
>ref|XM_794661.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC575147 (LOC575147), mRNA Length = 2412 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggac 254 |||||||||||||||||||| Sbjct: 2147 agaaggacgagaagaaggac 2166
>ref|XM_779518.1| PREDICTED: Strongylocentrotus purpuratus similar to Double-stranded RNA-binding protein Staufen homolog (LOC579398), mRNA Length = 2624 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aagaaggacgagaagaagga 253 |||||||||||||||||||| Sbjct: 1456 aagaaggacgagaagaagga 1475
>gb|AE008752.1| Salmonella typhimurium LT2, section 56 of 220 of the complete genome Length = 20097 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccagcccgccagcgccgtcgccga 110 ||||||||||||||||| |||||| Sbjct: 17267 ccagcccgccagcgccgccgccga 17244
>gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosome 12, complete sequence Length = 220129 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 ||||||||||||||||||| |||| Sbjct: 83968 gaagaagaaggacgagaaggagga 83945
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacgacg 258 |||||| ||||||||||||||||| Sbjct: 143263 agaaggccgagaagaaggacgacg 143286
>emb|AL590450.1|CNS07EGH chromosome XI of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 267509 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 9010 gaagaagaaggaggagaagaagga 8987 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 8977 gaagaagaaggaggagaagaagga 8954
>emb|AL590445.1|CNS07EGC chromosome V of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 211018 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 208850 gaagaagaaggaggagaagaagga 208873 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 208817 gaagaagaaggaggagaagaagga 208840
>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete sequence Length = 176578 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 4731 gaagaagaaggaggagaagaagga 4708
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 61322 agaagaaggaggagaagaaggacg 61299
>gb|AC146469.23| Pan troglodytes clone rp43-45g24, complete sequence Length = 191684 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 cggagatcctccagaaaataaacc 34 |||| ||||||||||||||||||| Sbjct: 3980 cggaaatcctccagaaaataaacc 3957
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 aaggagcagctcgaactctacgtc 308 ||||||||||||||||||| |||| Sbjct: 479522 aaggagcagctcgaactcttcgtc 479499
>dbj|AB077114.1| Prunus persica mRNA, microsatellite marker M11c Length = 535 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 ||||||||||||| |||||||||| Sbjct: 212 gaagaagaaggacaagaagaagga 235
>ref|XM_691923.1| PREDICTED: Danio rerio similar to Cep164 protein (LOC568587), mRNA Length = 519 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 339 gaagaagaaggaggagaagaagga 362
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 agcccgccagcgccgtcgccgaac 112 ||||||||| |||||||||||||| Sbjct: 1752669 agcccgccatcgccgtcgccgaac 1752646
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 226 aggggaagaagaaggacgagaagaagga 253 |||||||||||||||| ||| ||||||| Sbjct: 249743 aggggaagaagaaggaggaggagaagga 249770
>dbj|AK080322.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630053J03 product:unclassifiable, full insert sequence Length = 1125 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 82 gaagaagaaggaggagaagaagga 59
>gb|AF289054.1|AF289054 Lymantria xylina nucleopolyhedrovirus helicase-like gene sequence Length = 3646 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gaagaaggacgacgatctgt 264 |||||||||||||||||||| Sbjct: 2099 gaagaaggacgacgatctgt 2080
>ref|NM_072972.2| Caenorhabditis elegans B0222.5 (B0222.5) mRNA, complete cds Length = 1519 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 cggagatcctccagaaaata 30 |||||||||||||||||||| Sbjct: 291 cggagatcctccagaaaata 310
>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149183 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaagg 252 ||||||||||||| |||||||||| Sbjct: 124336 ggaagaagaaggaggagaagaagg 124359
>gb|AC020971.3|AC020971 Mus musculus chromosome 18 clone RP23-56B11, complete sequence Length = 236350 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 190262 gaagaagaaggaggagaagaagga 190239
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 20183587 agaagaaggaggagaagaaggacg 20183564
>gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 (CIT-HSPC_470E3), complete sequence Length = 229155 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 ||||||||||||| |||||||||| Sbjct: 90716 gaagaagaaggacaagaagaagga 90693
>dbj|AK069934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035E16, full insert sequence Length = 935 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 368 agaagaaggaggagaagaaggacg 391
>gb|AF034101.2|AF034101 Streptomyces coelicolor ribosomal protein S2 (rpsB) and elongation factor Ts (tsf) genes, complete cds Length = 2162 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 agaaggacgagaagaaggacgacg 258 |||||| ||||||||||||||||| Sbjct: 961 agaaggccgagaagaaggacgacg 984
>gb|AC117205.3| Mus musculus BAC clone RP23-257K20 from 10, complete sequence Length = 177430 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 gccctcgagagcatgaggcaggag 371 ||||||||||| |||||||||||| Sbjct: 118247 gccctcgagagaatgaggcaggag 118270
>gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, complete sequence Length = 189528 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 54722 gaagaagaaggaggagaagaagga 54699
>gb|AC153979.3| Mus musculus 10 BAC RP24-502B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173683 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 ggaagaagaaggacgagaagaagg 252 ||||||||||||| |||||||||| Sbjct: 410 ggaagaagaaggaggagaagaagg 433
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ccagcccgccagcgccgtcgccga 110 ||||||||||||||||| |||||| Sbjct: 1777010 ccagcccgccagcgccgccgccga 1777033
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 gaagaaggacgacgatctgt 264 |||||||||||||||||||| Sbjct: 96011 gaagaaggacgacgatctgt 95992
>dbj|AB081564.1| Paralichthys olivaceus TCRJd-Cd2-S gene for T cell receptor delta chain (J-C region), partial cds Length = 3764 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 3185 gaagaagaaggaggagaagaagga 3162
>dbj|AB081563.1| Paralichthys olivaceus TCRJd-Cd2-L gene for T cell receptor delta chain (J-C region), partial cds Length = 3980 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 3502 gaagaagaaggaggagaagaagga 3479 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 3424 gaagaagaaggaggagaagaagga 3401
>dbj|AB081562.1| Paralichthys olivaceus TCRJd-Cd1 gene for T cell receptor delta chain (J-C region), partial cds Length = 4892 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 4534 gaagaagaaggaggagaagaagga 4511
>emb|BX544889.5| Mouse DNA sequence from clone RP23-216C16 on chromosome 4, complete sequence Length = 93737 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 67421 gaagaagaaggaggagaagaagga 67398
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 84888 gaagaagaaggaggagaagaagga 84911 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 84683 gaagaagaaggaggagaagaagga 84706
>gb|U00922.1|U00922 Gallus gallus myosin binding protein C (MyBP-C) mRNA, complete cds Length = 3488 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 63 gaagaagaaggaggagaagaagga 86
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 agaagaaggacgagaagaaggacg 255 |||||||||| ||||||||||||| Sbjct: 20194863 agaagaaggaggagaagaaggacg 20194840
>gb|U00923.1|GGU00923 Gallus gallus myosin binding protein C (MyBP-C) mRNA, partial cds Length = 784 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 63 gaagaagaaggaggagaagaagga 86
>gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, complete sequence Length = 197813 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 ggagatcctccagaaaataa 31 |||||||||||||||||||| Sbjct: 93159 ggagatcctccagaaaataa 93178
>emb|AL627269.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 5/20 Length = 254050 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 ccagcccgccagcgccgtcgccga 110 ||||||||||||||||| |||||| Sbjct: 151173 ccagcccgccagcgccgccgccga 151150
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 3077846 gaagaagaaggaggagaagaagga 3077823
>gb|U19858.1|SAU19858 Streptomyces antibioticus guanosine pentaphosphate synthetase (gpsI) gene, complete cds Length = 2838 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggacgagaagaaggacgacg 258 |||||||||||||||||||| Sbjct: 2623 ggacgagaagaaggacgacg 2642
>emb|AL683879.19| Mouse DNA sequence from clone RP23-36D5 on chromosome 11, complete sequence Length = 202441 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 156534 gaagaagaaggaggagaagaagga 156557
>gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosome 13, complete sequence Length = 206286 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 gaagaagaaggacgagaagaagga 253 |||||||||||| ||||||||||| Sbjct: 197707 gaagaagaaggaggagaagaagga 197730 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,703,999 Number of Sequences: 3902068 Number of extensions: 3703999 Number of successful extensions: 82440 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81634 Number of HSP's gapped (non-prelim): 806 length of query: 506 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 484 effective length of database: 17,147,199,772 effective search space: 8299244689648 effective search space used: 8299244689648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
