Clone Name | bastl50d04 |
---|---|
Clone Library Name | barley_pub |
>ARGC_THETN (Q8R7B8) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 344 Score = 32.0 bits (71), Expect = 0.83 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Frame = +3 Query: 336 YGGDY------KTASALVECYEDSVTQLHIMGDPGARP 431 YGG+Y K A L E Y DS+ + ++G+PG P Sbjct: 114 YGGEYDGYDGIKRAYGLPEIYRDSIKEADVVGNPGCYP 151
>NIFK_ANASP (P00468) Nitrogenase molybdenum-iron protein beta chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 512 Score = 30.4 bits (67), Expect = 2.4 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +1 Query: 22 NFASAPTPEPESRNNSWLRELLIQDKESERQEISIRPKKSCK 147 NF A PE R + W + ++K R+ +++ P K C+ Sbjct: 30 NFEGAHPPEEVERVSEWTKSWDYREKNFAREALTVNPAKGCQ 71
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P +L ++++ LG+P L +WL TD C Sbjct: 34 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC 63
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P +L ++++ LG+P L +WL TD C Sbjct: 34 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC 63
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +3 Query: 246 PSQSWSLFKLRQLLGDPPVLGTWLNYTDFC 335 P +L ++++ LG+P L +WL TD C Sbjct: 34 PQDKQALLQIKKDLGNPTTLSSWLPTTDCC 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,122,611 Number of Sequences: 219361 Number of extensions: 820933 Number of successful extensions: 2855 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2800 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2855 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)