ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAPS3_MOUSE (Q922D4) SAPS domain family member 3 34 0.19
2SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-in... 34 0.19
3SAPS3_CHICK (Q5F471) SAPS domain family member 3 34 0.19
4SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B 33 0.56
5SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A 33 0.56
6SAPS2_HUMAN (O75170) SAPS domain family member 2 32 0.73
7SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2 32 0.73
8SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1 32 0.95
9SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1 32 0.95
10ACOB_RALEU (P27746) Acetoin:2,6-dichlorophenolindophenol oxidore... 29 6.2

>SAPS3_MOUSE (Q922D4) SAPS domain family member 3|
          Length = 844

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L ++S +DT+L +E+  L++L+DE+++ +      R +I
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLI 45



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>SAPS3_HUMAN (Q5H9R7) SAPS domain family member 3 (Sporulation-induced|
           transcript 4-associated protein SAPL) (Protein
           phosphatase 6 regulatory subunit 3)
          Length = 873

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L ++S +DT+L +E+  L++L+DE+++ +      R +I
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLI 45



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>SAPS3_CHICK (Q5F471) SAPS domain family member 3|
          Length = 873

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 15/46 (32%), Positives = 29/46 (63%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L ++S +DT+L +E+  L++L+DE+++ +      R +I
Sbjct: 1   MFWKFD-LHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQNRKLI 45



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>SAP3B_XENLA (Q6NRF1) SAPS domain family member 3-B|
          Length = 850

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L ++S +DT+L ++   L++L+DE++I +      R ++
Sbjct: 1   MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLV 45



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>SAP3A_XENLA (Q6NRI0) SAPS domain family member 3-A|
          Length = 852

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 14/46 (30%), Positives = 28/46 (60%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L ++S +DT+L ++   L++L+DE++I +      R ++
Sbjct: 1   MFWKFD-LHSSSHIDTLLERDEVTLKELMDEEDILQECKAQNRKLV 45



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>SAPS2_HUMAN (O75170) SAPS domain family member 2|
          Length = 927

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L+  S VD +L +E+  L++L+DED+I +      + ++
Sbjct: 1   MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLL 45



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>SAPS2_MOUSE (Q8R3Q2) SAPS domain family member 2|
          Length = 923

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L+  S VD +L +E+  L++L+DED+I +      + ++
Sbjct: 1   MFWKFD-LNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQNQKLL 45



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>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L  +S +DT+L +E+  L +LLDE+++ +      R ++
Sbjct: 1   MFWKFD-LHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVNRKLL 45



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>SAPS1_MOUSE (Q7TSI3) SAPS domain family member 1|
          Length = 856

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 361 MFWHVPGLSAASPVDTILXQENFKLEDLLDEDEISRSASTDTRLII 498
           MFW    L  +S +DT+L +E+  L +LLDE+++ +      R ++
Sbjct: 1   MFWKFD-LHTSSHLDTLLEKEDLSLPELLDEEDVLQECKVVNRKLL 45



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>ACOB_RALEU (P27746) Acetoin:2,6-dichlorophenolindophenol oxidoreductase beta|
           subunit (EC 1.1.1.-) (Acetoin:DCPIP oxidoreductase-beta)
           (AO:DCPIP OR) (TPP-dependent acetoin dehydrogenase E1
           beta-subunit)
          Length = 337

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +1

Query: 325 GAGFR----HNLLLYKMFWHVPGLSAASPVDTILXQENFKLEDLLDEDEI 462
           GAGFR    H+ +L  +F H+PGL    P  T    +   ++ + D D +
Sbjct: 129 GAGFRAAAQHSQMLTPLFTHIPGLKVVCP-STPYDTKGLLIQAIRDNDPV 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,333,967
Number of Sequences: 219361
Number of extensions: 1073811
Number of successful extensions: 2740
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2740
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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