ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 3e-36
2ref|XM_473921.1| Oryza sativa (japonica cultivar-group), predic... 155 2e-34
3emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 117 4e-23
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
5ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 ... 54 4e-04
6gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, comp... 54 4e-04
7gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, comp... 54 4e-04
8gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana... 54 4e-04
9gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, ... 54 4e-04
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
11dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
12dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
13ref|XM_476020.1| Oryza sativa (japonica cultivar-group), predic... 44 0.43
14gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.43
15emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section... 44 0.43
16emb|X73124.1|BSGENR B.subtilis genomic region (325 to 333) 44 0.43
17dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
18dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
19dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
20emb|AL022315.1|HS1177I5 Human DNA sequence from clone RP5-1177I5... 42 1.7
21gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, com... 42 1.7
22gb|AC098680.3| Homo sapiens BAC clone RP11-600L4 from 4, complet... 42 1.7
23gb|AF497619.1| Homo sapiens 15q11-q13 clone p316L5CpG2 genomic s... 42 1.7
24gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, comple... 42 1.7
25emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chr... 42 1.7
26emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chro... 42 1.7
27emb|AL732634.13| Mouse DNA sequence from clone RP23-322G19 on ch... 42 1.7
28ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
29gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, co... 40 6.8
30ref|XM_775037.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.8
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
32dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
33dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
34dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
35dbj|AK069982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
36dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.8
37dbj|AB209209.1| Homo sapiens mRNA for Thy-1 cell surface antigen... 40 6.8
38gb|M11749.1|HUMTHY1A Human Thy-1 glycoprotein gene, complete cds 40 6.8
39dbj|AP002409.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.8 
>dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full
           insert sequence
          Length = 2332

 Score =  161 bits (81), Expect = 3e-36
 Identities = 137/152 (90%), Gaps = 3/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 346 ttgttattgtacaagatgttttggcatgtacctggactttctgccgcatcaccagtggat 405
           |||||| ||| ||| ||||||||||| ||||||||| | ||||| |||||||| ||||||
Sbjct: 334 ttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcaccggtggat 393

                                                                       
Query: 406 actattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaaat-atc 464
           |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 394 actattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaaataatc 453

                                           
Query: 465 caggagtgc-aagcact-gacacccgcctaat 494
           ||||||||| |||||||  |||||||||||||
Sbjct: 454 caggagtgcaaagcactaaacacccgcctaat 485
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>ref|XM_473921.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2331

 Score =  155 bits (78), Expect = 2e-34
 Identities = 125/137 (91%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                       
Query: 361 atgttttggcatgtacctggactttctgccgcatcaccagtggatactattttagancag 420
           ||||||||||| ||||||||| | ||||| |||||||| |||||||||||||||||  ||
Sbjct: 1   atgttttggcacgtacctggaatctctgctgcatcaccggtggatactattttagacaag 60

                                                                       
Query: 421 gaaaatttcaagttggaagaccttcttgatgaggatgaaat-atccaggagtgc-aagca 478
           ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 61  gaaaatttcaagttggaggaccttcttgatgaggatgaaataatccaggagtgcaaagca 120

                            
Query: 479 ct-gacacccgcctaat 494
           ||  |||||||||||||
Sbjct: 121 ctaaacacccgcctaat 137
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score =  117 bits (59), Expect = 4e-23
 Identities = 91/98 (92%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                          
Query: 400    gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
              |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 145165 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 145224

                                                    
Query: 460    at-atccaggagtgc-aagcact-gacacccgcctaat 494
              || |||||||||||| |||||||  |||||||||||||
Sbjct: 145225 ataatccaggagtgcaaagcactaaacacccgcctaat 145262



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                   
Query: 346    ttgttattgtacaagatgttttggcatgtacctggactttctgccgcatcacc 398
              |||||| ||| ||| ||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 145029 ttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcacc 145081
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  117 bits (59), Expect = 4e-23
 Identities = 91/98 (92%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                            
Query: 400      gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
                |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 31567482 gtggatactattttagacaaggaaaatttcaagttggaggaccttcttgatgaggatgaa 31567541

                                                      
Query: 460      at-atccaggagtgc-aagcact-gacacccgcctaat 494
                || |||||||||||| |||||||  |||||||||||||
Sbjct: 31567542 ataatccaggagtgcaaagcactaaacacccgcctaat 31567579



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 346      ttgttattgtacaagatgttttggcatgtacctggactttctgccgcatcacc 398
                |||||| ||| ||| ||||||||||| ||||||||| | ||||| ||||||||
Sbjct: 31567346 ttgttactgtgcaaaatgttttggcacgtacctggaatctctgctgcatcacc 31567398
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>ref|NM_100673.2| Arabidopsis thaliana unknown protein AT1G07990 mRNA, complete cds
          Length = 2904

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 421 gaaaatttcaagttggaagaccttcttgatgagga 455
           |||||||||| ||||||||| ||||||||||||||
Sbjct: 316 gaaaatttcacgttggaagagcttcttgatgagga 350
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>gb|AY127028.1| Arabidopsis thaliana At1g07990/T6D22_5 mRNA, complete cds
          Length = 2905

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 421 gaaaatttcaagttggaagaccttcttgatgagga 455
           |||||||||| ||||||||| ||||||||||||||
Sbjct: 316 gaaaatttcacgttggaagagcttcttgatgagga 350
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>gb|BT004535.1| Arabidopsis thaliana At1g07990/T6D22_5 gene, complete cds
          Length = 2409

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 421 gaaaatttcaagttggaagaccttcttgatgagga 455
           |||||||||| ||||||||| ||||||||||||||
Sbjct: 61  gaaaatttcacgttggaagagcttcttgatgagga 95
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>gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana BAC T6D22 from chromosome I,
             complete sequence
          Length = 120965

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 421   gaaaatttcaagttggaagaccttcttgatgagga 455
             |||||||||| ||||||||| ||||||||||||||
Sbjct: 33592 gaaaatttcacgttggaagagcttcttgatgagga 33626
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>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4,
             AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes,
             partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1),
             EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13
             genes, complete cds
          Length = 63093

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 421   gaaaatttcaagttggaagaccttcttgatgagga 455
             |||||||||| ||||||||| ||||||||||||||
Sbjct: 62164 gaaaatttcacgttggaagagcttcttgatgagga 62198
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 16       cccccctcctccccacgctcctc 38
                |||||||||||||||||||||||
Sbjct: 38977449 cccccctcctccccacgctcctc 38977427



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 434      tggaagaccttcttgatgaggatgaaat 461
                ||||||| |||||||| |||||||||||
Sbjct: 22772361 tggaagaacttcttgacgaggatgaaat 22772388
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 16    cccccctcctccccacgctcctc 38
             |||||||||||||||||||||||
Sbjct: 51082 cccccctcctccccacgctcctc 51060
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 16     cccccctcctccccacgctcctc 38
              |||||||||||||||||||||||
Sbjct: 142235 cccccctcctccccacgctcctc 142213
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>ref|XM_476020.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2313

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 64/77 (83%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                       
Query: 400 gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
           |||||||| ||| ||||  |||| || ||||  || ||||| |||||||| |||||||||
Sbjct: 40  gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 99

                            
Query: 460 at-atccaggagtgcaa 475
           || || |||||||||||
Sbjct: 100 ataattcaggagtgcaa 116
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 64/77 (83%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                         
Query: 400   gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
             |||||||| ||| ||||  |||| || ||||  || ||||| |||||||| |||||||||
Sbjct: 79883 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 79942

                              
Query: 460   at-atccaggagtgcaa 475
             || || |||||||||||
Sbjct: 79943 ataattcaggagtgcaa 79959
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>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to
              4010779
          Length = 201139

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 442    cttcttgatgaggatgaaatat 463
              ||||||||||||||||||||||
Sbjct: 108838 cttcttgatgaggatgaaatat 108859
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>emb|X73124.1|BSGENR B.subtilis genomic region (325 to 333)
          Length = 97015

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 442   cttcttgatgaggatgaaatat 463
             ||||||||||||||||||||||
Sbjct: 38108 cttcttgatgaggatgaaatat 38087
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 64/77 (83%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                            
Query: 400      gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
                |||||||| ||| ||||  |||| || ||||  || ||||| |||||||| |||||||||
Sbjct: 29301226 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 29301285

                                 
Query: 460      at-atccaggagtgcaa 475
                || || |||||||||||
Sbjct: 29301286 ataattcaggagtgcaa 29301302
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>dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full
           insert sequence
          Length = 3155

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 64/77 (83%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                       
Query: 400 gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
           |||||||| ||| ||||  |||| || ||||  || ||||| |||||||| |||||||||
Sbjct: 263 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 322

                            
Query: 460 at-atccaggagtgcaa 475
           || || |||||||||||
Sbjct: 323 ataattcaggagtgcaa 339
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>dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039C12, full
           insert sequence
          Length = 2733

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 64/77 (83%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                       
Query: 400 gtggatactattttagancaggaaaatttcaagttggaagaccttcttgatgaggatgaa 459
           |||||||| ||| ||||  |||| || ||||  || ||||| |||||||| |||||||||
Sbjct: 250 gtggatacaattctagacaaggagaacttcacattagaagaacttcttgacgaggatgaa 309

                            
Query: 460 at-atccaggagtgcaa 475
           || || |||||||||||
Sbjct: 310 ataattcaggagtgcaa 326
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>emb|AL022315.1|HS1177I5 Human DNA sequence from clone RP5-1177I5 on chromosome 22q13.1,
             complete sequence
          Length = 96256

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    ccccgcccccggatccagccc 91
             |||||||||||||||||||||
Sbjct: 62797 ccccgcccccggatccagccc 62817
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>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence
          Length = 194973

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 86    cagccccgcggcgccggctccccgg 110
             ||||||||||| |||||||||||||
Sbjct: 30237 cagccccgcggagccggctccccgg 30213
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>gb|AC098680.3| Homo sapiens BAC clone RP11-600L4 from 4, complete sequence
          Length = 180918

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     ccctcctccccacgctcctca 39
              |||||||||||||||||||||
Sbjct: 150838 ccctcctccccacgctcctca 150858
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>gb|AF497619.1| Homo sapiens 15q11-q13 clone p316L5CpG2 genomic sequence
          Length = 1808

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 86  cagccccgcggcgccggctccccgg 110
           ||||||||||| |||||||||||||
Sbjct: 513 cagccccgcggagccggctccccgg 537
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>gb|AC107075.4| Homo sapiens BAC clone RP11-452N17 from 2, complete sequence
          Length = 176425

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   gagactgtgagggagctggat 334
             |||||||||||||||||||||
Sbjct: 35477 gagactgtgagggagctggat 35497
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>emb|AL607074.13| Mouse DNA sequence from clone RP23-174M9 on chromosome 4, complete
              sequence
          Length = 204428

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 6      cacacaaccgcccccctcctcccca 30
              |||||||||||||||| ||||||||
Sbjct: 190463 cacacaaccgccccccccctcccca 190439
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>emb|AL772315.4| Mouse DNA sequence from clone RP23-54A13 on chromosome 4, complete
              sequence
          Length = 200266

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 419    aggaaaatttcaagttggaag 439
              |||||||||||||||||||||
Sbjct: 140853 aggaaaatttcaagttggaag 140873
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>emb|AL732634.13| Mouse DNA sequence from clone RP23-322G19 on chromosome 4, complete
             sequence
          Length = 203176

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 419   aggaaaatttcaagttggaag 439
             |||||||||||||||||||||
Sbjct: 10293 aggaaaatttcaagttggaag 10313
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>ref|NM_192531.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 434 tggaagaccttcttgatgaggatgaaat 461
           ||||||| |||||||| |||||||||||
Sbjct: 206 tggaagaacttcttgacgaggatgaaat 233
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>gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, complete sequence
          Length = 191746

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   ttaaatctgcttggtttctg 314
             ||||||||||||||||||||
Sbjct: 84624 ttaaatctgcttggtttctg 84605
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>ref|XM_775037.1| PREDICTED: Strongylocentrotus purpuratus similar to A-kinase anchor
           protein 13 isoform 2 (LOC574669), mRNA
          Length = 3561

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 435 ggaagaccttcttgatgagg 454
           ||||||||||||||||||||
Sbjct: 970 ggaagaccttcttgatgagg 951
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 69       ttccccgcccccggatccagcccc 92
                ||||||||| ||||||||||||||
Sbjct: 23696863 ttccccgccgccggatccagcccc 23696886
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 434   tggaagaccttcttgatgaggatgaaat 461
             ||||||| |||||||| |||||||||||
Sbjct: 89750 tggaagaacttcttgacgaggatgaaat 89777
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>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1669_F01
          Length = 140019

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 69     ttccccgcccccggatccagcccc 92
              ||||||||| ||||||||||||||
Sbjct: 137963 ttccccgccgccggatccagcccc 137986
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 69   ttccccgcccccggatccagcccc 92
            ||||||||| ||||||||||||||
Sbjct: 7447 ttccccgccgccggatccagcccc 7470
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>dbj|AK069982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034J11, full
           insert sequence
          Length = 2064

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 69  ttccccgcccccggatccagcccc 92
           ||||||||| ||||||||||||||
Sbjct: 127 ttccccgccgccggatccagcccc 150
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>dbj|AP003396.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-334E6, complete
             sequences
          Length = 191362

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   tttctgagactgtgagggag 328
             ||||||||||||||||||||
Sbjct: 87315 tttctgagactgtgagggag 87334
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>dbj|AB209209.1| Homo sapiens mRNA for Thy-1 cell surface antigen variant protein
          Length = 2427

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 tttctgagactgtgagggag 328
           ||||||||||||||||||||
Sbjct: 465 tttctgagactgtgagggag 446
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>gb|M11749.1|HUMTHY1A Human Thy-1 glycoprotein gene, complete cds
          Length = 2806

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 tttctgagactgtgagggag 328
           ||||||||||||||||||||
Sbjct: 150 tttctgagactgtgagggag 131
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>dbj|AP002409.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-781P6, complete
             sequence
          Length = 180566

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   ctgctggtttccccctcttcccca 175
             ||||||| ||||||||||||||||
Sbjct: 71386 ctgctggcttccccctcttcccca 71409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,131,209
Number of Sequences: 3902068
Number of extensions: 4131209
Number of successful extensions: 82218
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81986
Number of HSP's gapped (non-prelim): 228
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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