Clone Name | bastl50c12 |
---|---|
Clone Library Name | barley_pub |
>TRMD_NITEU (Q820K4) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 270 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 310 SNLFGRHTWRIQNFSKEKKREMKSEPFGAG 399 SNL+ HTW +N++ R + P+G G Sbjct: 30 SNLYRLHTWNPRNYAMNHYRTVDDSPYGGG 59
>GMEB1_HUMAN (Q9Y692) Glucocorticoid modulatory element-binding protein 1| (GMEB-1) (Parvovirus initiation factor p96) (PIF p96) (DNA-binding protein p96PIF) Length = 573 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -3 Query: 310 KDRAQDHRLRHQCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDPHPPIHQ 161 K + QDHRL+ Q + S +P +R +Q+ T P PP+ Q Sbjct: 350 KKQGQDHRLKSQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQ 399
>AMPE_PIG (Q95334) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP)| (Aminopeptidase A) (APA) Length = 942 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = +1 Query: 190 VSGDSLSEWRSCDQVDNG-----SPSTSPPFWDTDGEDDDPGPCPSNLFGRHTWR 339 + G S+ RSCD D G SPS PP T D G CP++ WR Sbjct: 28 IVGLSVGLTRSCDSKDGGQGTTQSPSHLPP---TSSPPQDQGVCPASEDESGNWR 79
>POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3012 Score = 30.4 bits (67), Expect = 1.1 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 14/118 (11%) Frame = +1 Query: 1 HFLSLPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDE 180 H +LPP L + PP + + A +A+L F S A L+++ G E Sbjct: 2310 HGCALPPKGLPP--VPPPRKKRVVQLDEGSAKRALAELAQTSFPPST---ATLSEDSGRE 2364 Query: 181 DQSVSGDSLSEWRSCDQV-DNGSPSTSPPF-------------WDTDGEDDDPGPCPS 312 ++S D D+ D+GS S+ PP W T ED D C S Sbjct: 2365 TSTLSSDMTPPREEADRASDDGSYSSMPPLEGEPGDPDLSSGSWSTVSEDHDSVVCCS 2422
>NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer cells| cyclophilin-related protein) (NK-TR protein) Length = 1453 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = -3 Query: 325 ARINLKDRAQDHRLRHQCPRREGTSKGSHCQPGRRTAIQKGNHRTHS 185 AR+N + R Q+ Q P R+G S+ R + K HRT S Sbjct: 1276 ARLNRRPRNQESSSDDQTPSRDGDSQSRSPHRSRSKSETKSRHRTRS 1322
>Y4VJ_RHISN (Q53218) Hypothetical 39.2 kDa protein y4vJ| Length = 351 Score = 29.3 bits (64), Expect = 2.3 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Frame = +1 Query: 4 FLSLPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSG--------AML 159 ++ +PP+ +SV + P P ++ + A + +LFV +L G ++ Sbjct: 151 YMQIPPTAISVRTLQKPTPPIWIATASSKTMARAYREGHNLFVTALHDGLETLGLLRGII 210 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTS 258 G E + V +S R C D+G+ S Sbjct: 211 KTAAGSEGKEVRDSKVSLLRCCYASDDGAEINS 243
>CD22_MOUSE (P35329) B-cell receptor CD22 precursor (Leu-14) (B-lymphocyte cell| adhesion molecule) (BL-CAM) (Siglec-2) Length = 862 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -3 Query: 265 REGTSKGSHCQPGRRTAIQKGNHRTHSDPHPPIHQLTWLQTS 140 R S G H G++ + SD +PPI Q TW +S Sbjct: 612 RVSISPGDHVMEGKKATLS-----CESDANPPISQYTWFDSS 648
>WDR48_MOUSE (Q8BH57) WD-repeat protein 48| Length = 676 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 Query: 280 HQCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDPHPPI 167 H P E ++ +H G+ + +QKGN PH P+ Sbjct: 478 HVTPMDEEENEVNHVSGGQESRVQKGNGYFQVPPHTPV 515
>EAF2_CHICK (Q5ZHP7) ELL-associated factor 2| Length = 264 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/82 (28%), Positives = 34/82 (41%) Frame = +1 Query: 58 PQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDEDQSVSGDSLSEWRSCDQVD 237 P + SP P D + +D + LK+ A + D+L D S DS S S + Sbjct: 137 PNNIKNSP--PKDKMFPSSPMDDIERELKAEASIMDQLSSSDS--SSDSKSSSSSSSSSE 192 Query: 238 NGSPSTSPPFWDTDGEDDDPGP 303 N S +D ED++ P Sbjct: 193 NSS---------SDSEDEEARP 205
>ROBO1_RAT (O55005) Roundabout homolog 1 precursor| Length = 1651 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Frame = +1 Query: 43 IAPPPPQHFLGSPLWP-------------ADAVVAKLKLD-LFVKSLKSGAMLADELGDE 180 I+PP ++ PL AD VAK++ L ++ L+ A +GD Sbjct: 1305 ISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTP--ASSVGDL 1362 Query: 181 DQSVSGDSLSEWRSCDQVDNGSPSTS 258 + SV+G ++ W S + DN S S Sbjct: 1363 ESSVTGSMINGWGSASEEDNISSGRS 1388
>ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U| twenty twenty) Length = 1651 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Frame = +1 Query: 43 IAPPPPQHFLGSPLWP-------------ADAVVAKLKLD-LFVKSLKSGAMLADELGDE 180 I+PP ++ PL AD VAK++ L ++ L+ A +GD Sbjct: 1305 ISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTP--ASSVGDL 1362 Query: 181 DQSVSGDSLSEWRSCDQVDNGSPSTS 258 + SV+G ++ W S + DN S S Sbjct: 1363 ESSVTGSMINGWGSASEEDNISSGRS 1388
>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 476 Score = 28.9 bits (63), Expect = 3.1 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Frame = +1 Query: 4 FLSLPPSLLSVH-FIAPPPPQH---------FLGSPLWPADAVVAKLKLDLFVKSLKSGA 153 FL L P L H AP P H L LW +VA L ++ FV+ +K G Sbjct: 193 FLHLIPHALEPHSHHAPEQPGHGHSHSGQGPILSVGLWVLSGIVAFLVVEKFVRHVKGGH 252 Query: 154 MLADELGDEDQSVSGDSLSEWRSCDQVDNGSPST 255 G D+ GDS + + PST Sbjct: 253 --GHSHGHGDRHAHGDSHTHGDRHECSSKEKPST 284
>ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor| Length = 1612 Score = 28.9 bits (63), Expect = 3.1 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%) Frame = +1 Query: 43 IAPPPPQHFLGSPLWP-------------ADAVVAKLKLD-LFVKSLKSGAMLADELGDE 180 I+PP ++ PL AD VAK++ L ++ L+ A +GD Sbjct: 1266 ISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTP--ASSVGDL 1323 Query: 181 DQSVSGDSLSEWRSCDQVDNGSPSTS 258 + SV+G ++ W S + DN S S Sbjct: 1324 ESSVTGSMINGWGSASEEDNISSGRS 1349
>CSG_HALJP (Q9C4B4) Cell surface glycoprotein precursor (S-layer protein)| Length = 862 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +1 Query: 169 LGDEDQSVSGDSLSEWRSCDQ----VDNGSPSTSPPFWDTDGEDDD 294 L DED+SV+ DS EW S Q +D + P + + +D D Sbjct: 725 LDDEDESVTVDSTDEWSSDGQWSVSLDLSDENVEPGNFTVEADDGD 770
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 304 RAQDHRLRHQ---CPRREGTSKGSHCQPGRRTAIQKGNHRTHSD 182 +A+ + +H+ RRE K + GR + G HR HSD Sbjct: 244 KARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSD 287
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 28.1 bits (61), Expect = 5.2 Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Frame = +1 Query: 13 LPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDEDQ-- 186 +PP+L S APPPP FL A + S G A+ GD + Sbjct: 491 IPPTLPSTTSAAPPPPPAFLTQQPQSGGAPAPPPPPQMPATSTSGGGSFAETTGDAGRDA 550 Query: 187 ---SVSG-DSLSEWRSCD--QVDNGS--------PSTSPPFWDTDGEDDDPGPCPSNL 318 S+ G + R D Q+D S S SPP G PG P++L Sbjct: 551 LLASIRGAGGIGALRKVDKSQLDKPSVLLQEARGESASPP--AAAGNGGTPGGPPASL 606
>DXR_KITGR (Q9AJD7) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 386 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +2 Query: 173 GMRIRVCPVIPFLNGGPATRLTMGALRRPLPSGTLMAKTMILGPVLQIYSGDILGE 340 G R V ++ +GGP T L P+ L T +GPV+ I S ++ + Sbjct: 161 GARAEVRKLVVTASGGPFRNRTREQLAAVTPADALAHPTWAMGPVVTINSATLVNK 216
>CYC_STELP (Q41346) Cytochrome c| Length = 108 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 277 DGEDDDPGPCPSNLFGRHTWRIQNFS 354 +GE + GP LFGRHT ++ FS Sbjct: 27 EGEGNKIGPNLHGLFGRHTGSVEGFS 52
>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 897 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +1 Query: 13 LPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDEDQSV 192 L SL S+ PPP H SPL + VA+L + + + D L D + Sbjct: 87 LEVSLSSLSLAVPPPRFHDSSSPLLTSGPSVAELPWAVKSEDKAKYDAIFDSLSPVDGFL 146 Query: 193 SGDSL 207 SGD + Sbjct: 147 SGDKV 151
>SALL1_MOUSE (Q9ER74) Sal-like protein 1 (Zinc finger protein Spalt-3) (Sal-3)| (MSal-3) Length = 1322 Score = 28.1 bits (61), Expect = 5.2 Identities = 27/97 (27%), Positives = 39/97 (40%) Frame = +1 Query: 115 KLDLFVKSLKSGAMLADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDD 294 +L +KS+++G+M D L ++ SV GD S+ GSP+ S + Sbjct: 879 QLQASLKSVENGSMEGDVLTNDSSSVGGDMESQ-------SAGSPAIS------ESTSSM 925 Query: 295 PGPCPSNLFGRHTWRIQNFSKEKKREMKSEPFGAGGF 405 PSN Q F K E K + G G F Sbjct: 926 QALSPSN-------STQEFHKSPGMEEKPQRVGPGEF 955
>YCJG_ECOLI (P51981) Hypothetical protein ycjG| Length = 321 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%) Frame = +1 Query: 7 LSLPPSLLSVHFIAPPPPQHFLGSP--LWPADAVVAKLKLDLFVKSLKSGAMLADELGDE 180 ++LP ++++ + P S LW A A + K+KLD L S M+A Sbjct: 113 ITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLD---NHLISERMVAIRTAVP 169 Query: 181 DQSVSGDSLSEWRS 222 D ++ D+ WR+ Sbjct: 170 DATLIVDANESWRA 183
>Y2084_MYCTU (Q10692) Hypothetical protein Rv2084/MT2146| Length = 380 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = -3 Query: 304 RAQDHRLRH--QCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDP 179 R QD R R+ + P R GTS+G C P R AI G H DP Sbjct: 294 RRQDSRRRNGPRRPARRGTSRGRRCAP--RVAI--GWHTPIGDP 333
>SDK1_MOUSE (Q3UH53) Protein sidekick-1 precursor| Length = 2193 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 7/30 (23%) Frame = +1 Query: 31 SVHFIAPPPPQHFLGS-------PLWPADA 99 +VHF+ PPPQ F+ WPADA Sbjct: 867 TVHFLWNPPPQQFINGINQGYKLLAWPADA 896
>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)| Length = 873 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 7/74 (9%) Frame = +1 Query: 199 DSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSNLFGRHTWRI-------QNFSK 357 +S+ + +Q+ G+ +PP P P P + FG H + Q Sbjct: 265 NSMHQMVEANQLQTGANGANPP----------PAPLPPSSFGSHQQHLAALAAQAQEQQN 314 Query: 358 EKKREMKSEPFGAG 399 + + KS P GAG Sbjct: 315 QHSKYAKSSPTGAG 328
>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 928 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 608 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSD 659 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 614 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 665
>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)| Length = 4725 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Frame = +1 Query: 7 LSLPPSLLSVHFIAPPPPQHFLGSPLW-----PADAVVAKLKLDLFVKSLKSGAMLADEL 171 LS+P HF+ + +P+W A++++ K + L+ M + E Sbjct: 4376 LSVPEGTTRAHFMKWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQK--MQSSEE 4433 Query: 172 GDEDQSVSGDSLSEWRSCDQVDNG 243 ED VSG S E S D G Sbjct: 4434 DGEDDQVSGSSKKESSSSSSEDKG 4457
>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 935 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 639 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSD 690 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 633 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSD 684 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 645 SDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 696
>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 946 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 608 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSD 659 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 614 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 665
>YWJF_BACSU (P45866) Hypothetical protein ywjF| Length = 705 Score = 27.7 bits (60), Expect = 6.8 Identities = 9/22 (40%), Positives = 11/22 (50%) Frame = -2 Query: 77 EPRKCCGGGGAMKWTDRREGGR 12 E CCG GG + W + G R Sbjct: 619 ETGMCCGAGGGLMWMEEETGNR 640
>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 989 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 639 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSD 690 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 633 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSD 684 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 645 SDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 696
>PSBQ_ORYSA (P83646) Oxygen-evolving enhancer protein 3 (OEE3) (LP02)| (Fragments) Length = 22 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 43 IAPPPPQHFLGSPLWPADA 99 + PPPPQ F PL PA+A Sbjct: 1 LGPPPPQSFYLQPLPPAEA 19
>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 933 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 591 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 642
>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 933 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 591 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 642
>IBBR_ORYSA (P07084) Bowman-Birk type bran trypsin inhibitor precursor (RBTI)| (OSE727A) Length = 195 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 13/48 (27%) Frame = +1 Query: 214 WRSCDQVDNGSPSTSPPFWDTDGE-------------DDDPGPCPSNL 318 W+ CD ++ T+PP W + E + PGP P L Sbjct: 64 WKCCDNIERLPTKTNPPQWRCNDELEPSQCTAACKSCREAPGPFPGKL 111
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -3 Query: 298 QDHRLRHQCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDPHPP 170 +D R H R G +GSHC+ + + R H PHPP Sbjct: 232 RDARPPHNLCRGFGCPEGSHCEVLEKHPVCV---RNHVPPHPP 271
>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 1029 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 631 SDSASDSDSTSDSDSTSDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 682 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = +1 Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315 +D D D + DS S+ S D+ S S S D+D + D S+ Sbjct: 625 SDSASDSDSASDSDSTSDSDSTSDSDSASDSDSDSDSDSDSDSDSDSDSDSD 676 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.136 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,312,820 Number of Sequences: 219361 Number of extensions: 1308482 Number of successful extensions: 5117 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3819 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4943 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)