ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRMD_NITEU (Q820K4) tRNA (guanine-N(1)-)-methyltransferase (EC 2... 30 1.1
2GMEB1_HUMAN (Q9Y692) Glucocorticoid modulatory element-binding p... 30 1.1
3AMPE_PIG (Q95334) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP) (A... 30 1.1
4POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p... 30 1.1
5NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer... 30 1.4
6Y4VJ_RHISN (Q53218) Hypothetical 39.2 kDa protein y4vJ 29 2.3
7CD22_MOUSE (P35329) B-cell receptor CD22 precursor (Leu-14) (B-l... 29 2.3
8WDR48_MOUSE (Q8BH57) WD-repeat protein 48 29 3.1
9EAF2_CHICK (Q5ZHP7) ELL-associated factor 2 29 3.1
10ROBO1_RAT (O55005) Roundabout homolog 1 precursor 29 3.1
11ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (... 29 3.1
12KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier fami... 29 3.1
13ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor 29 3.1
14CSG_HALJP (Q9C4B4) Cell surface glycoprotein precursor (S-layer ... 29 3.1
15RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2 28 4.0
16LAS17_YEAST (Q12446) Proline-rich protein LAS17 28 5.2
17DXR_KITGR (Q9AJD7) 1-deoxy-D-xylulose 5-phosphate reductoisomera... 28 5.2
18CYC_STELP (Q41346) Cytochrome c 28 5.2
19EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 1... 28 5.2
20SALL1_MOUSE (Q9ER74) Sal-like protein 1 (Zinc finger protein Spa... 28 5.2
21YCJG_ECOLI (P51981) Hypothetical protein ycjG 28 5.2
22Y2084_MYCTU (Q10692) Hypothetical protein Rv2084/MT2146 28 5.2
23SDK1_MOUSE (Q3UH53) Protein sidekick-1 precursor 28 6.8
24RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx) 28 6.8
25CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-bind... 28 6.8
26DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC) 28 6.8
27CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-bind... 28 6.8
28CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-bind... 28 6.8
29YWJF_BACSU (P45866) Hypothetical protein ywjF 28 6.8
30CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-bind... 28 6.8
31PSBQ_ORYSA (P83646) Oxygen-evolving enhancer protein 3 (OEE3) (L... 27 8.9
32CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-bind... 27 8.9
33CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-bind... 27 8.9
34IBBR_ORYSA (P07084) Bowman-Birk type bran trypsin inhibitor prec... 27 8.9
35DP87_DICDI (Q04503) Prespore protein DP87 precursor 27 8.9
36CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-bind... 27 8.9

>TRMD_NITEU (Q820K4) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)|
           (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
          Length = 270

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 310 SNLFGRHTWRIQNFSKEKKREMKSEPFGAG 399
           SNL+  HTW  +N++    R +   P+G G
Sbjct: 30  SNLYRLHTWNPRNYAMNHYRTVDDSPYGGG 59



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>GMEB1_HUMAN (Q9Y692) Glucocorticoid modulatory element-binding protein 1|
           (GMEB-1) (Parvovirus initiation factor p96) (PIF p96)
           (DNA-binding protein p96PIF)
          Length = 573

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 310 KDRAQDHRLRHQCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDPHPPIHQ 161
           K + QDHRL+ Q  +       S  +P +R  +Q+    T   P PP+ Q
Sbjct: 350 KKQGQDHRLKSQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQ 399



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>AMPE_PIG (Q95334) Glutamyl aminopeptidase (EC 3.4.11.7) (EAP)|
           (Aminopeptidase A) (APA)
          Length = 942

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
 Frame = +1

Query: 190 VSGDSLSEWRSCDQVDNG-----SPSTSPPFWDTDGEDDDPGPCPSNLFGRHTWR 339
           + G S+   RSCD  D G     SPS  PP   T     D G CP++      WR
Sbjct: 28  IVGLSVGLTRSCDSKDGGQGTTQSPSHLPP---TSSPPQDQGVCPASEDESGNWR 79



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>POLG_HCVVN (O92530) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3012

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
 Frame = +1

Query: 1    HFLSLPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDE 180
            H  +LPP  L    + PP  +  +      A   +A+L    F  S    A L+++ G E
Sbjct: 2310 HGCALPPKGLPP--VPPPRKKRVVQLDEGSAKRALAELAQTSFPPST---ATLSEDSGRE 2364

Query: 181  DQSVSGDSLSEWRSCDQV-DNGSPSTSPPF-------------WDTDGEDDDPGPCPS 312
              ++S D        D+  D+GS S+ PP              W T  ED D   C S
Sbjct: 2365 TSTLSSDMTPPREEADRASDDGSYSSMPPLEGEPGDPDLSSGSWSTVSEDHDSVVCCS 2422



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>NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer cells|
            cyclophilin-related protein) (NK-TR protein)
          Length = 1453

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -3

Query: 325  ARINLKDRAQDHRLRHQCPRREGTSKGSHCQPGRRTAIQKGNHRTHS 185
            AR+N + R Q+     Q P R+G S+       R  +  K  HRT S
Sbjct: 1276 ARLNRRPRNQESSSDDQTPSRDGDSQSRSPHRSRSKSETKSRHRTRS 1322



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>Y4VJ_RHISN (Q53218) Hypothetical 39.2 kDa protein y4vJ|
          Length = 351

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
 Frame = +1

Query: 4   FLSLPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSG--------AML 159
           ++ +PP+ +SV  +  P P  ++ +      A   +   +LFV +L  G         ++
Sbjct: 151 YMQIPPTAISVRTLQKPTPPIWIATASSKTMARAYREGHNLFVTALHDGLETLGLLRGII 210

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTS 258
               G E + V    +S  R C   D+G+   S
Sbjct: 211 KTAAGSEGKEVRDSKVSLLRCCYASDDGAEINS 243



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>CD22_MOUSE (P35329) B-cell receptor CD22 precursor (Leu-14) (B-lymphocyte cell|
           adhesion molecule) (BL-CAM) (Siglec-2)
          Length = 862

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -3

Query: 265 REGTSKGSHCQPGRRTAIQKGNHRTHSDPHPPIHQLTWLQTS 140
           R   S G H   G++  +        SD +PPI Q TW  +S
Sbjct: 612 RVSISPGDHVMEGKKATLS-----CESDANPPISQYTWFDSS 648



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>WDR48_MOUSE (Q8BH57) WD-repeat protein 48|
          Length = 676

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 280 HQCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDPHPPI 167
           H  P  E  ++ +H   G+ + +QKGN      PH P+
Sbjct: 478 HVTPMDEEENEVNHVSGGQESRVQKGNGYFQVPPHTPV 515



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>EAF2_CHICK (Q5ZHP7) ELL-associated factor 2|
          Length = 264

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/82 (28%), Positives = 34/82 (41%)
 Frame = +1

Query: 58  PQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDEDQSVSGDSLSEWRSCDQVD 237
           P +   SP  P D +     +D   + LK+ A + D+L   D   S DS S   S    +
Sbjct: 137 PNNIKNSP--PKDKMFPSSPMDDIERELKAEASIMDQLSSSDS--SSDSKSSSSSSSSSE 192

Query: 238 NGSPSTSPPFWDTDGEDDDPGP 303
           N S         +D ED++  P
Sbjct: 193 NSS---------SDSEDEEARP 205



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>ROBO1_RAT (O55005) Roundabout homolog 1 precursor|
          Length = 1651

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
 Frame = +1

Query: 43   IAPPPPQHFLGSPLWP-------------ADAVVAKLKLD-LFVKSLKSGAMLADELGDE 180
            I+PP    ++  PL               AD  VAK++   L ++ L+     A  +GD 
Sbjct: 1305 ISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTP--ASSVGDL 1362

Query: 181  DQSVSGDSLSEWRSCDQVDNGSPSTS 258
            + SV+G  ++ W S  + DN S   S
Sbjct: 1363 ESSVTGSMINGWGSASEEDNISSGRS 1388



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>ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U|
            twenty twenty)
          Length = 1651

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
 Frame = +1

Query: 43   IAPPPPQHFLGSPLWP-------------ADAVVAKLKLD-LFVKSLKSGAMLADELGDE 180
            I+PP    ++  PL               AD  VAK++   L ++ L+     A  +GD 
Sbjct: 1305 ISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTP--ASSVGDL 1362

Query: 181  DQSVSGDSLSEWRSCDQVDNGSPSTS 258
            + SV+G  ++ W S  + DN S   S
Sbjct: 1363 ESSVTGSMINGWGSASEEDNISSGRS 1388



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>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 476

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
 Frame = +1

Query: 4   FLSLPPSLLSVH-FIAPPPPQH---------FLGSPLWPADAVVAKLKLDLFVKSLKSGA 153
           FL L P  L  H   AP  P H          L   LW    +VA L ++ FV+ +K G 
Sbjct: 193 FLHLIPHALEPHSHHAPEQPGHGHSHSGQGPILSVGLWVLSGIVAFLVVEKFVRHVKGGH 252

Query: 154 MLADELGDEDQSVSGDSLSEWRSCDQVDNGSPST 255
                 G  D+   GDS +     +      PST
Sbjct: 253 --GHSHGHGDRHAHGDSHTHGDRHECSSKEKPST 284



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>ROBO1_MOUSE (O89026) Roundabout homolog 1 precursor|
          Length = 1612

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
 Frame = +1

Query: 43   IAPPPPQHFLGSPLWP-------------ADAVVAKLKLD-LFVKSLKSGAMLADELGDE 180
            I+PP    ++  PL               AD  VAK++   L ++ L+     A  +GD 
Sbjct: 1266 ISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTP--ASSVGDL 1323

Query: 181  DQSVSGDSLSEWRSCDQVDNGSPSTS 258
            + SV+G  ++ W S  + DN S   S
Sbjct: 1324 ESSVTGSMINGWGSASEEDNISSGRS 1349



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>CSG_HALJP (Q9C4B4) Cell surface glycoprotein precursor (S-layer protein)|
          Length = 862

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +1

Query: 169 LGDEDQSVSGDSLSEWRSCDQ----VDNGSPSTSPPFWDTDGEDDD 294
           L DED+SV+ DS  EW S  Q    +D    +  P  +  + +D D
Sbjct: 725 LDDEDESVTVDSTDEWSSDGQWSVSLDLSDENVEPGNFTVEADDGD 770



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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -3

Query: 304 RAQDHRLRHQ---CPRREGTSKGSHCQPGRRTAIQKGNHRTHSD 182
           +A+  + +H+     RRE   K    + GR +    G HR HSD
Sbjct: 244 KARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSD 287



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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 16/118 (13%)
 Frame = +1

Query: 13  LPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDEDQ-- 186
           +PP+L S    APPPP  FL        A        +   S   G   A+  GD  +  
Sbjct: 491 IPPTLPSTTSAAPPPPPAFLTQQPQSGGAPAPPPPPQMPATSTSGGGSFAETTGDAGRDA 550

Query: 187 ---SVSG-DSLSEWRSCD--QVDNGS--------PSTSPPFWDTDGEDDDPGPCPSNL 318
              S+ G   +   R  D  Q+D  S         S SPP     G    PG  P++L
Sbjct: 551 LLASIRGAGGIGALRKVDKSQLDKPSVLLQEARGESASPP--AAAGNGGTPGGPPASL 606



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>DXR_KITGR (Q9AJD7) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 386

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 173 GMRIRVCPVIPFLNGGPATRLTMGALRRPLPSGTLMAKTMILGPVLQIYSGDILGE 340
           G R  V  ++   +GGP    T   L    P+  L   T  +GPV+ I S  ++ +
Sbjct: 161 GARAEVRKLVVTASGGPFRNRTREQLAAVTPADALAHPTWAMGPVVTINSATLVNK 216



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>CYC_STELP (Q41346) Cytochrome c|
          Length = 108

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 DGEDDDPGPCPSNLFGRHTWRIQNFS 354
           +GE +  GP    LFGRHT  ++ FS
Sbjct: 27  EGEGNKIGPNLHGLFGRHTGSVEGFS 52



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>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 897

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 13  LPPSLLSVHFIAPPPPQHFLGSPLWPADAVVAKLKLDLFVKSLKSGAMLADELGDEDQSV 192
           L  SL S+    PPP  H   SPL  +   VA+L   +  +       + D L   D  +
Sbjct: 87  LEVSLSSLSLAVPPPRFHDSSSPLLTSGPSVAELPWAVKSEDKAKYDAIFDSLSPVDGFL 146

Query: 193 SGDSL 207
           SGD +
Sbjct: 147 SGDKV 151



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>SALL1_MOUSE (Q9ER74) Sal-like protein 1 (Zinc finger protein Spalt-3) (Sal-3)|
            (MSal-3)
          Length = 1322

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 27/97 (27%), Positives = 39/97 (40%)
 Frame = +1

Query: 115  KLDLFVKSLKSGAMLADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDD 294
            +L   +KS+++G+M  D L ++  SV GD  S+         GSP+ S      +     
Sbjct: 879  QLQASLKSVENGSMEGDVLTNDSSSVGGDMESQ-------SAGSPAIS------ESTSSM 925

Query: 295  PGPCPSNLFGRHTWRIQNFSKEKKREMKSEPFGAGGF 405
                PSN         Q F K    E K +  G G F
Sbjct: 926  QALSPSN-------STQEFHKSPGMEEKPQRVGPGEF 955



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>YCJG_ECOLI (P51981) Hypothetical protein ycjG|
          Length = 321

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +1

Query: 7   LSLPPSLLSVHFIAPPPPQHFLGSP--LWPADAVVAKLKLDLFVKSLKSGAMLADELGDE 180
           ++LP ++++   +    P     S   LW A A + K+KLD     L S  M+A      
Sbjct: 113 ITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLD---NHLISERMVAIRTAVP 169

Query: 181 DQSVSGDSLSEWRS 222
           D ++  D+   WR+
Sbjct: 170 DATLIVDANESWRA 183



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>Y2084_MYCTU (Q10692) Hypothetical protein Rv2084/MT2146|
          Length = 380

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 304 RAQDHRLRH--QCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDP 179
           R QD R R+  + P R GTS+G  C P  R AI  G H    DP
Sbjct: 294 RRQDSRRRNGPRRPARRGTSRGRRCAP--RVAI--GWHTPIGDP 333



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>SDK1_MOUSE (Q3UH53) Protein sidekick-1 precursor|
          Length = 2193

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = +1

Query: 31  SVHFIAPPPPQHFLGS-------PLWPADA 99
           +VHF+  PPPQ F+           WPADA
Sbjct: 867 TVHFLWNPPPQQFINGINQGYKLLAWPADA 896



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>RX_DROME (Q9W2Q1) Retinal homeobox protein Rx (DRx1) (DRx)|
          Length = 873

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
 Frame = +1

Query: 199 DSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSNLFGRHTWRI-------QNFSK 357
           +S+ +    +Q+  G+   +PP          P P P + FG H   +       Q    
Sbjct: 265 NSMHQMVEANQLQTGANGANPP----------PAPLPPSSFGSHQQHLAALAAQAQEQQN 314

Query: 358 EKKREMKSEPFGAG 399
           +  +  KS P GAG
Sbjct: 315 QHSKYAKSSPTGAG 328



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>CLFA_STAAS (Q6GB45) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 928

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 608 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSD 659



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 614 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 665



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>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4725

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
 Frame = +1

Query: 7    LSLPPSLLSVHFIAPPPPQHFLGSPLW-----PADAVVAKLKLDLFVKSLKSGAMLADEL 171
            LS+P      HF+        + +P+W      A++++   K    +  L+   M + E 
Sbjct: 4376 LSVPEGTTRAHFMKWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQK--MQSSEE 4433

Query: 172  GDEDQSVSGDSLSEWRSCDQVDNG 243
              ED  VSG S  E  S    D G
Sbjct: 4434 DGEDDQVSGSSKKESSSSSSEDKG 4457



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>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 935

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 639 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSD 690



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 633 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSD 684



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 645 SDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 696



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>CLFA_STAAW (Q8NXJ1) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 946

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 608 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSD 659



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 614 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 665



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>YWJF_BACSU (P45866) Hypothetical protein ywjF|
          Length = 705

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 77  EPRKCCGGGGAMKWTDRREGGR 12
           E   CCG GG + W +   G R
Sbjct: 619 ETGMCCGAGGGLMWMEEETGNR 640



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>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 989

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 639 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSD 690



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 633 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSD 684



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 645 SDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 696



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>PSBQ_ORYSA (P83646) Oxygen-evolving enhancer protein 3 (OEE3) (LP02)|
          (Fragments)
          Length = 22

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 43 IAPPPPQHFLGSPLWPADA 99
          + PPPPQ F   PL PA+A
Sbjct: 1  LGPPPPQSFYLQPLPPAEA 19



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>CLFA_STAAU (Q53653) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 933

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 591 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 642



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>CLFA_STAAC (Q5HHM8) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 933

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 591 SDSASDSDSASDSDSASDSDSASDSDSASDSDSDNDSDSDSDSDSDSDSDSD 642



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>IBBR_ORYSA (P07084) Bowman-Birk type bran trypsin inhibitor precursor (RBTI)|
           (OSE727A)
          Length = 195

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 13/48 (27%)
 Frame = +1

Query: 214 WRSCDQVDNGSPSTSPPFWDTDGE-------------DDDPGPCPSNL 318
           W+ CD ++     T+PP W  + E              + PGP P  L
Sbjct: 64  WKCCDNIERLPTKTNPPQWRCNDELEPSQCTAACKSCREAPGPFPGKL 111



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>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 298 QDHRLRHQCPRREGTSKGSHCQPGRRTAIQKGNHRTHSDPHPP 170
           +D R  H   R  G  +GSHC+   +  +     R H  PHPP
Sbjct: 232 RDARPPHNLCRGFGCPEGSHCEVLEKHPVCV---RNHVPPHPP 271



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>CLFA_STAAR (Q6GIK4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 1029

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 631 SDSASDSDSTSDSDSTSDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 682



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 160 ADELGDEDQSVSGDSLSEWRSCDQVDNGSPSTSPPFWDTDGEDDDPGPCPSN 315
           +D   D D +   DS S+  S    D+ S S S    D+D + D      S+
Sbjct: 625 SDSASDSDSASDSDSTSDSDSTSDSDSASDSDSDSDSDSDSDSDSDSDSDSD 676


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.136    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,312,820
Number of Sequences: 219361
Number of extensions: 1308482
Number of successful extensions: 5117
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4943
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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