ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl50c09 |
|---|---|
| Clone Library Name | barley_pub |
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 72.0 bits (175), Expect = 9e-13 Identities = 36/89 (40%), Positives = 59/89 (66%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV LP + +S LE +FS+VGPV++CF+V KGS+ +GFG+V F+ ++D +RA+++ Sbjct: 4 TLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKE 63 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 F G KI V +A ++ K + +K Sbjct: 64 ITTF--EGCKIDVTVAKKKLRNKSKETRK 90 Score = 43.5 bits (101), Expect = 3e-04 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI-- 373 TVF+ NL + + L V + G ++ +V +E SKG F QF T + A++ + Sbjct: 325 TVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 384 Query: 374 ----QQKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + G + GR+++V LA+ R + KK Sbjct: 385 ASPEAEGGGLKLDGRQLKVDLAVTRDEAAKLQTKK 419 Score = 40.8 bits (94), Expect = 0.002 Identities = 23/83 (27%), Positives = 40/83 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + + NL + DL+ VF+ G V + K +GF FVQF + +A +A++ Sbjct: 115 LIIRNLSFKCSEDDLKAVFTHYGTVLEV-NIPKKPDGKMRGFAFVQFKNLLEAGKALKGA 173 Query: 383 NGFAVAGRKIRVKLAIQRAPLKE 451 N + GR + V A+ + K+ Sbjct: 174 NMKEIKGRTVAVDWAVAKDKYKD 196
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 71.6 bits (174), Expect = 1e-12 Identities = 37/89 (41%), Positives = 59/89 (66%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV LP + +S LE +FS+VGPV++CF+V KGS+ +GFG+V F+ ++D +RA+++ Sbjct: 4 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKE 63 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 F G KI V +A K++L+ K Sbjct: 64 ITTF--EGCKINVTVA------KKKLRNK 84 Score = 45.4 bits (106), Expect = 9e-05 Identities = 25/83 (30%), Positives = 43/83 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + + NL + DL+TVF++ G V + K +GFGFVQF + +A +A++ Sbjct: 115 LIIRNLSFKCSEDDLKTVFAQFGAVLEV-NIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 173 Query: 383 NGFAVAGRKIRVKLAIQRAPLKE 451 N + GR + V A+ + K+ Sbjct: 174 NMKEIKGRTVAVDWAVAKDKYKD 196 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI-- 373 TVF+ NL + + +L + + G ++ +V +E SKG F QF T + A++ + Sbjct: 335 TVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLA 394 Query: 374 ----QQKNGFAVAGRKIRVKLAIQR 436 + G + GR+++V LA+ R Sbjct: 395 ASPENEAGGLKLDGRQLKVDLAVTR 419
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 63.5 bits (153), Expect = 3e-10 Identities = 31/84 (36%), Positives = 50/84 (59%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLPY S L +F + G V ++ ++ ++ S+GFGFV +TV++AE+A++ Sbjct: 138 LFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMY 197 Query: 383 NGFAVAGRKIRVKLAIQRAPLKER 454 N + V GR + V A +R ER Sbjct: 198 NRYDVNGRLLTVNKAARRGERPER 221 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/79 (35%), Positives = 45/79 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V N+P+ + LE +FSE G V +V + + S+GFGFV A+ + AI Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291 Query: 383 NGFAVAGRKIRVKLAIQRA 439 +G ++ GR IRV +A R+ Sbjct: 292 DGQSLDGRTIRVNVAEDRS 310
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 62.0 bits (149), Expect = 9e-10 Identities = 34/86 (39%), Positives = 50/86 (58%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P + VSN+P+ ++ DL+T+F + G V ++ ++ SKGFGFV QDAERA Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERAR 209 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKE 451 Q+ +G + GRKI V A R K+ Sbjct: 210 QELHGSMIEGRKIEVNCATARVHSKK 235
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 61.6 bits (148), Expect = 1e-09 Identities = 29/78 (37%), Positives = 48/78 (61%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLPY S L +F G V ++ ++ ++ S+GFGFV +TV++AE+A++ Sbjct: 57 LFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELL 116 Query: 383 NGFAVAGRKIRVKLAIQR 436 NG+ + GR++ V A R Sbjct: 117 NGYDMDGRQLTVNKAAPR 134 Score = 53.9 bits (128), Expect = 2e-07 Identities = 29/78 (37%), Positives = 46/78 (58%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NLP+ +S LE +FSE G V +V+ + + S+GFGFV ++ + AI Sbjct: 151 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 210 Query: 383 NGFAVAGRKIRVKLAIQR 436 +G + GR +RV +A +R Sbjct: 211 DGQTLDGRAVRVNVAEER 228
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/87 (36%), Positives = 49/87 (56%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + V+V NL + LET+FSE G V +V + S S+GFGFV +++ ++ A Sbjct: 192 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 251 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPLKE 451 I+ +G + GR IRV A R P ++ Sbjct: 252 IESLDGVDLNGRAIRVSPAEARPPRRQ 278 Score = 51.6 bits (122), Expect = 1e-06 Identities = 26/72 (36%), Positives = 42/72 (58%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL ++ S+ L +F G V ++ K + S+GFGFV ++ ++ E A QQ Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 383 NGFAVAGRKIRV 418 NG+ + GR +RV Sbjct: 149 NGYELDGRALRV 160
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/87 (36%), Positives = 49/87 (56%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + V+V NL + LET+FSE G V +V + S S+GFGFV +++ ++ A Sbjct: 186 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 245 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPLKE 451 I+ +G + GR IRV A R P ++ Sbjct: 246 IESLDGVDLNGRAIRVSPAEARPPRRQ 272 Score = 55.5 bits (132), Expect = 9e-08 Identities = 27/72 (37%), Positives = 43/72 (59%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP++ S+ L +F G V ++ K + S+GFGFV ++ ++ E A QQ Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 383 NGFAVAGRKIRV 418 NG+ + GR +RV Sbjct: 149 NGYELDGRALRV 160
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 57.8 bits (138), Expect = 2e-08 Identities = 29/75 (38%), Positives = 43/75 (57%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE VFS+ G + +V + ++ S+GFGFV F + DA+ A+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 383 NGFAVAGRKIRVKLA 427 NG +V GR+IRV A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 57.8 bits (138), Expect = 2e-08 Identities = 29/75 (38%), Positives = 43/75 (57%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE VFS+ G + +V + ++ S+GFGFV F + DA+ A+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 383 NGFAVAGRKIRVKLA 427 NG +V GR+IRV A Sbjct: 68 NGKSVDGRQIRVDQA 82
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP++ S+ L +F G V ++ K S S+GFGFV +T ++ E A QQ Sbjct: 90 LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149 Query: 383 NGFAVAGRKIRV 418 NG+ + GR IRV Sbjct: 150 NGYEIDGRAIRV 161 Score = 52.8 bits (125), Expect = 6e-07 Identities = 30/82 (36%), Positives = 45/82 (54%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + V+V NL + L+ +FSE G V +V + S S+GFGFV +++ ++ A Sbjct: 206 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDA 265 Query: 371 IQQKNGFAVAGRKIRVKLAIQR 436 I NG + GR IRV A +R Sbjct: 266 IDSLNGIDLDGRSIRVSAAEER 287
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/84 (33%), Positives = 49/84 (58%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLPY S L +F + G V ++ ++ ++ S+GFGFV +TV++A++A++ Sbjct: 99 LFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELY 158 Query: 383 NGFAVAGRKIRVKLAIQRAPLKER 454 + + + GR + V A R ER Sbjct: 159 SQYDLNGRLLTVNKAAPRGSRPER 182 Score = 52.4 bits (124), Expect = 7e-07 Identities = 29/78 (37%), Positives = 43/78 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V N+P+ + LE VFSE G V +V + S S+GFGFV ++ + AI Sbjct: 193 IYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANL 252 Query: 383 NGFAVAGRKIRVKLAIQR 436 +G + GR IRV A +R Sbjct: 253 DGQTLDGRTIRVNAAEER 270
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 57.4 bits (137), Expect = 2e-08 Identities = 30/89 (33%), Positives = 50/89 (56%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 +P + VSN+P+ ++ DL +F + G + ++ ++ SKGFGFV F DA+RA Sbjct: 119 TPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRA 176 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPLKERL 457 ++ +G V GRKI V A R +++ Sbjct: 177 REKLHGTVVEGRKIEVNNATARVMTNKKM 205
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 57.4 bits (137), Expect = 2e-08 Identities = 32/87 (36%), Positives = 50/87 (57%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + V+V NL + LE++FSE G V ++ + S SKGFGFV + + Q+ + A Sbjct: 202 SGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNA 261 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPLKE 451 I+ +G + GR+IRV A R P ++ Sbjct: 262 IKSLDGADLDGRQIRVSEAEARPPRRQ 288 Score = 57.0 bits (136), Expect = 3e-08 Identities = 28/72 (38%), Positives = 42/72 (58%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP+ S+ L +F G V ++ K + S+GFGFV ++V + E A QQ Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 383 NGFAVAGRKIRV 418 NG+ + GR +RV Sbjct: 153 NGYELDGRPLRV 164
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 57.0 bits (136), Expect = 3e-08 Identities = 29/75 (38%), Positives = 43/75 (57%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE VFS+ G + +V + ++ S+GFGFV F + DA+ A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 383 NGFAVAGRKIRVKLA 427 NG +V GR+IRV A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 57.0 bits (136), Expect = 3e-08 Identities = 29/75 (38%), Positives = 43/75 (57%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE VFS+ G + +V + ++ S+GFGFV F + DA+ A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 383 NGFAVAGRKIRVKLA 427 NG +V GR+IRV A Sbjct: 68 NGKSVDGRQIRVDQA 82
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 57.0 bits (136), Expect = 3e-08 Identities = 29/75 (38%), Positives = 43/75 (57%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE VFS+ G + +V + ++ S+GFGFV F + DA+ A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 383 NGFAVAGRKIRVKLA 427 NG +V GR+IRV A Sbjct: 68 NGKSVDGRQIRVDQA 82
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 57.0 bits (136), Expect = 3e-08 Identities = 32/82 (39%), Positives = 43/82 (52%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 + NL Y +DL F G + + K S SKGFGFV+F +DAE A+ + +G Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82 Query: 389 FAVAGRKIRVKLAIQRAPLKER 454 V GR++RV LA P ER Sbjct: 83 KLVDGRELRVTLAKYDRPSDER 104
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 57.0 bits (136), Expect = 3e-08 Identities = 29/72 (40%), Positives = 43/72 (59%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP++ S+ L +F G V ++ K + S+GFGFV +T ++ E A QQ Sbjct: 89 LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148 Query: 383 NGFAVAGRKIRV 418 NG+ + GR IRV Sbjct: 149 NGYEIDGRAIRV 160 Score = 51.6 bits (122), Expect = 1e-06 Identities = 30/82 (36%), Positives = 45/82 (54%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + V+V NL + L+ +FSE G V +V + S S+GFGFV +++ ++ A Sbjct: 205 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDA 264 Query: 371 IQQKNGFAVAGRKIRVKLAIQR 436 I NG + GR IRV A +R Sbjct: 265 IDSLNGVDLDGRSIRVSAAEER 286
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 56.6 bits (135), Expect = 4e-08 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = +2 Query: 242 DLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVK 421 DL VFS+ GP+ +V + S S+GF FV F V DA+ A ++ NG + GR+IRV Sbjct: 133 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192 Query: 422 LAIQRAP 442 +I + P Sbjct: 193 FSITKRP 199
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 56.6 bits (135), Expect = 4e-08 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = +2 Query: 242 DLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVK 421 DL VFS+ GP+ +V + S S+GF FV F V DA+ A ++ NG + GR+IRV Sbjct: 133 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192 Query: 422 LAIQRAP 442 +I + P Sbjct: 193 FSITKRP 199
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 56.6 bits (135), Expect = 4e-08 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = +2 Query: 242 DLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVK 421 DL VFS+ GP+ +V + S S+GF FV F V DA+ A ++ NG + GR+IRV Sbjct: 133 DLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192 Query: 422 LAIQRAP 442 +I + P Sbjct: 193 FSITKRP 199
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 56.2 bits (134), Expect = 5e-08 Identities = 31/79 (39%), Positives = 44/79 (55%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 SP V++ NL T + L+ FSE G V + + G+ S GFGFV F++ ++ E A Sbjct: 182 SPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAA 241 Query: 371 IQQKNGFAVAGRKIRVKLA 427 IQ N + G+KIRV A Sbjct: 242 IQALNNSVLEGQKIRVNKA 260 Score = 52.0 bits (123), Expect = 9e-07 Identities = 25/74 (33%), Positives = 41/74 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V N+P + +L T+ E G + ++ K S S+ FGFV TV+DA I++ Sbjct: 86 LYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKL 145 Query: 383 NGFAVAGRKIRVKL 424 N + GRKI+V + Sbjct: 146 NDTEIGGRKIKVNI 159
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 56.2 bits (134), Expect = 5e-08 Identities = 31/80 (38%), Positives = 45/80 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NLP+ + LE +FSE G V +V + + S+GFGFV + V + AI Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305 Query: 383 NGFAVAGRKIRVKLAIQRAP 442 +G + GR IRV +A +R P Sbjct: 306 DGQNLEGRAIRVNVAEERPP 325 Score = 55.1 bits (131), Expect = 1e-07 Identities = 28/84 (33%), Positives = 47/84 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL Y S L +F + G V ++ ++ ++ S+GFGFV ++V +AE A+++ Sbjct: 152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211 Query: 383 NGFAVAGRKIRVKLAIQRAPLKER 454 N + + GR + V A R ER Sbjct: 212 NRYDLNGRLLTVNKAAPRGSRPER 235
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 56.2 bits (134), Expect = 5e-08 Identities = 30/81 (37%), Positives = 46/81 (56%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P + VSN+P+ ++ DL +F + G + ++ ++ SKGFGFV F DA+RA Sbjct: 115 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAR 172 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 ++ +G V GRKI V A R Sbjct: 173 EKLHGTVVEGRKIEVNNATAR 193
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 56.2 bits (134), Expect = 5e-08 Identities = 31/84 (36%), Positives = 47/84 (55%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + ++V NL + LE +F+E G V ++ + S SKGFGFV ++ Q+ ++A Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAP 442 I NG + GR+IRV A R P Sbjct: 315 INSLNGADLDGRQIRVSEAEARPP 338 Score = 53.5 bits (127), Expect = 3e-07 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL + S+ L +F G V ++ K + S+GFGFV +T + E A QQ Sbjct: 101 LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQF 160 Query: 383 NGFAVAGRKIRV 418 NG+ GR +RV Sbjct: 161 NGYEFEGRPLRV 172
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 56.2 bits (134), Expect = 5e-08 Identities = 30/81 (37%), Positives = 46/81 (56%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P + VSN+P+ ++ DL +F + G + ++ ++ SKGFGFV F DA+RA Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAR 173 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 ++ +G V GRKI V A R Sbjct: 174 EKLHGTVVEGRKIEVNNATAR 194
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 55.8 bits (133), Expect = 7e-08 Identities = 26/72 (36%), Positives = 45/72 (62%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP++ SS L +F+E G V +V + ++ S+GF FV +V++A+ AI+ Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 175 Query: 383 NGFAVAGRKIRV 418 +G V GR ++V Sbjct: 176 DGSQVGGRTVKV 187 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/85 (28%), Positives = 45/85 (52%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 SP ++V+NL + S L F++ ++ + S S+GFGF+ F++ + A Sbjct: 215 SPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSA 274 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPL 445 + N + GR +R+ +A Q+AP+ Sbjct: 275 LDTMNEVELEGRPLRLNVAGQKAPV 299
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 55.8 bits (133), Expect = 7e-08 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 12/103 (11%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S +FV NLPY SDLE VFS+ G + + S TSKGF +VQ+ A +A + Sbjct: 301 SRLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYK 360 Query: 377 QKNGFAVAGRKIRVKLA------------IQRAPLKERLQKKR 469 + +G GR + + A + + PLK++ Q KR Sbjct: 361 ELDGKHFQGRLMHILPATAKKTYKIDEHELSKLPLKKQKQIKR 403 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/79 (26%), Positives = 41/79 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + + NLP+ D+ ++F G +R V K +++GFGF F + ++AE A+ Sbjct: 704 IIIKNLPFQATKKDVRSLFGAYGQLRSV-RVPKKFDRSARGFGFADFVSAREAENAMDAL 762 Query: 383 NGFAVAGRKIRVKLAIQRA 439 + GR++ ++ A + A Sbjct: 763 KNTHLLGRRLVLEFANEEA 781
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 55.5 bits (132), Expect = 9e-08 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK---GSETSKGFGFVQFATVQDAERA 370 T+F+ NL + L+ VFS+VG V+ C + K G S GFGFV++ + A++A Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 ++Q G V G K+ V+++ + L +K+ Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAVTLARKK 823 Score = 49.3 bits (116), Expect = 6e-06 Identities = 25/72 (34%), Positives = 37/72 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLPYT DLE +FS+ GP+ ++ KGF F+ F + A +A + Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEV 463 Query: 383 NGFAVAGRKIRV 418 +G GR + V Sbjct: 464 DGQVFQGRMLHV 475 Score = 44.3 bits (103), Expect = 2e-04 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK-GSETSKGFGFVQFATVQDAERAI 373 S + V N+P+ S ++ +FS G ++ + G+ T +GFGFV F T QDA+RA Sbjct: 832 SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAF 891 Query: 374 QQK-NGFAVAGRKIRVKLAIQRAPLKERLQKKRACS**LRAKMKRDIL 514 + + GR++ ++ A L + L++K A K KR ++ Sbjct: 892 NALCHSTHLYGRRLVLEWADSEVTL-QALRRKTAAHFHEPPKKKRSVV 938
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 55.1 bits (131), Expect = 1e-07 Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 3/79 (3%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK---GSETSKGFGFVQFATVQDAERA 370 T+F+ NL ++ L+ VFS+VG ++ C + K G S GFGFV++ + A++A Sbjct: 723 TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKA 782 Query: 371 IQQKNGFAVAGRKIRVKLA 427 ++Q G V G K+ V+++ Sbjct: 783 LKQLQGHTVDGHKLEVRIS 801 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/72 (34%), Positives = 35/72 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL YT DLE +FS GP+ ++ KGF FV F + A +A + Sbjct: 402 LFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEV 461 Query: 383 NGFAVAGRKIRV 418 +G GR + V Sbjct: 462 DGQVFQGRMLHV 473 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK-GSETSKGFGFVQFATVQDAERA 370 S + V N+P+ ++ +FS G ++ + G+ +GFGFV F T QDA++A Sbjct: 824 SKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKA 882
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 53.9 bits (128), Expect = 2e-07 Identities = 26/77 (33%), Positives = 42/77 (54%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + + V+ LP +L ++FS +G V ++ K + S G+GFV + T +DAERAI Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIS 79 Query: 377 QKNGFAVAGRKIRVKLA 427 NG + + I+V A Sbjct: 80 TLNGLRLQSKTIKVSYA 96 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +++S LP T D+E +FS G + ++ + + S+G F++F +AE AI Sbjct: 106 ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAIT 165 Query: 377 QKNGFAVAG--RKIRVKLA 427 G G I VK A Sbjct: 166 SFIGHKPPGSSEPITVKFA 184 Score = 34.7 bits (78), Expect = 0.16 Identities = 18/79 (22%), Positives = 34/79 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL L +F G V ++ + KGFGFV +++ AI Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + + ++V ++ Sbjct: 306 NGYRLGDKILQVSFKTNKS 324
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 53.9 bits (128), Expect = 2e-07 Identities = 26/77 (33%), Positives = 42/77 (54%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + + V+ LP +L ++FS +G V ++ K + S G+GFV + T +DAERAI Sbjct: 20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIN 79 Query: 377 QKNGFAVAGRKIRVKLA 427 NG + + I+V A Sbjct: 80 TLNGLRLQSKTIKVSYA 96 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +++S LP T D+E +FS G + ++ + + S+G F++F +AE AI Sbjct: 106 ANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAIT 165 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 166 SFNGHKPPGSSEPITVKFA 184 Score = 35.8 bits (81), Expect = 0.070 Identities = 19/79 (24%), Positives = 34/79 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL L +F G V ++ + KGFGFV ++A AI Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + + ++V ++ Sbjct: 306 NGYRLGDKILQVSFKTNKS 324
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/73 (36%), Positives = 42/73 (57%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV N+PY L+ +FSEVGPV +V + + KG+GF ++ + A A++ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 380 KNGFAVAGRKIRV 418 NG +GR +RV Sbjct: 77 LNGREFSGRALRV 89
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/73 (36%), Positives = 42/73 (57%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV N+PY L+ +FSEVGPV +V + + KG+GF ++ + A A++ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 380 KNGFAVAGRKIRV 418 NG +GR +RV Sbjct: 77 LNGREFSGRALRV 89
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/73 (36%), Positives = 42/73 (57%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV N+PY L+ +FSEVGPV +V + + KG+GF ++ + A A++ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 380 KNGFAVAGRKIRV 418 NG +GR +RV Sbjct: 77 LNGREFSGRALRV 89
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/73 (36%), Positives = 42/73 (57%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV N+PY L+ +FSEVGPV +V + + KG+GF ++ + A A++ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 380 KNGFAVAGRKIRV 418 NG +GR +RV Sbjct: 77 LNGREFSGRALRV 89
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 53.5 bits (127), Expect = 3e-07 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VFV +L + D++ F+ G + +V + SKG+GFV F DAE AIQQ Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 383 NGFAVAGRKIRVKLAIQRAP 442 G + GR+IR A ++ P Sbjct: 168 GGQWLGGRQIRTNWATRKPP 187 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/78 (26%), Positives = 40/78 (51%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P T++V NL + + +FS++GP + C M+ + + FV+F + A A+ Sbjct: 6 PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAG--NDPYCFVEFHEHRHAAAAL 63 Query: 374 QQKNGFAVAGRKIRVKLA 427 NG + G++++V A Sbjct: 64 AAMNGRKIMGKEVKVNWA 81
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 53.5 bits (127), Expect = 3e-07 Identities = 29/80 (36%), Positives = 42/80 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VFV +L + D++ F+ G + +V + SKG+GFV F DAE AIQQ Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 383 NGFAVAGRKIRVKLAIQRAP 442 G + GR+IR A ++ P Sbjct: 168 GGQWLGGRQIRTNWATRKPP 187 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/78 (26%), Positives = 40/78 (51%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P T++V NL + + +FS++GP + C M+ + + FV+F + A A+ Sbjct: 6 PKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAG--NDPYCFVEFHEHRHAAAAL 63 Query: 374 QQKNGFAVAGRKIRVKLA 427 NG + G++++V A Sbjct: 64 AAMNGRKIMGKEVKVNWA 81
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 53.1 bits (126), Expect = 4e-07 Identities = 29/79 (36%), Positives = 45/79 (56%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S TV+V NLP + ++E +FS+ GPV + K G+ FV+F +DAE A Sbjct: 5 SSRTVYVGNLPGDIREREVEDLFSKYGPV---VQIDLKVPPRPPGYAFVEFDDARDAEDA 61 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I ++G+ G ++RV+LA Sbjct: 62 IHGRDGYDFDGHRLRVELA 80
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 53.1 bits (126), Expect = 4e-07 Identities = 24/75 (32%), Positives = 42/75 (56%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+PY + +F++VGPV+ +V + + KG+GF +F + A++ Sbjct: 7 NVVFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVR 66 Query: 377 QKNGFAVAGRKIRVK 421 + N + RKIRV+ Sbjct: 67 KLNNSELGPRKIRVE 81
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 53.1 bits (126), Expect = 4e-07 Identities = 26/80 (32%), Positives = 44/80 (55%) Frame = +2 Query: 188 HSPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAER 367 +S + + V+ LP + +L ++F +GP+ C ++ + S G+GFV F + DA R Sbjct: 75 NSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALR 134 Query: 368 AIQQKNGFAVAGRKIRVKLA 427 AI NG V ++I+V A Sbjct: 135 AINNLNGITVRNKRIKVSFA 154
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 52.8 bits (125), Expect = 6e-07 Identities = 27/75 (36%), Positives = 42/75 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ L + LE F++ G + +V + ++ S+GFGFV F V DA+ A+ Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 383 NGFAVAGRKIRVKLA 427 NG +V GR+IRV A Sbjct: 67 NGKSVDGRQIRVDQA 81
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/81 (30%), Positives = 43/81 (53%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P ++V +L + L +F G + ++ + SKG+GF+ F+ + A RA+ Sbjct: 262 PMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 321 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 +Q NGF +AGR +RV +R Sbjct: 322 EQLNGFELAGRPMRVGHVTER 342 Score = 42.4 bits (98), Expect = 8e-04 Identities = 22/58 (37%), Positives = 30/58 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 TVF L + DLE FS VG VR +++ + S SKG +V+F +Q AI Sbjct: 167 TVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 224
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 52.0 bits (123), Expect = 9e-07 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP +L+++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLRLQTKTIKVSYA 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 185 GLNGQKPPGATEPITVKFA 203 Score = 37.7 bits (86), Expect = 0.019 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 383 NGFAVAGRKIRV 418 NG+ + R ++V Sbjct: 339 NGYRLGDRVLQV 350
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 52.0 bits (123), Expect = 9e-07 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP +L+++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLRLQTKTIKVSYA 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 185 GLNGQKPPGATEPITVKFA 203 Score = 37.7 bits (86), Expect = 0.019 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 383 NGFAVAGRKIRV 418 NG+ + R ++V Sbjct: 338 NGYRLGDRVLQV 349
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 52.0 bits (123), Expect = 9e-07 Identities = 25/79 (31%), Positives = 43/79 (54%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP +L+++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 37 SKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLRLQTKTIKVSYA 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 185 GLNGQKPPGATEPITVKFA 203 Score = 37.7 bits (86), Expect = 0.019 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 383 NGFAVAGRKIRV 418 NG+ + R ++V Sbjct: 338 NGYRLGDRVLQV 349
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 51.6 bits (122), Expect = 1e-06 Identities = 28/75 (37%), Positives = 42/75 (56%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++FV NL Y DL FS++G V R ++ S+G +G G V+F D +RAI+ Sbjct: 136 NSIFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSRGHH--RGMGTVEFTNSDDVDRAIR 193 Query: 377 QKNGFAVAGRKIRVK 421 Q +G RKI V+ Sbjct: 194 QYDGAFFMDRKIFVR 208 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/73 (35%), Positives = 37/73 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V V NLP + L+ +F E G V V G S G G V F ++D RAI++ Sbjct: 238 VIVKNLPASVNWQALKDIFKECGNVAHAD-VELDGDGVSTGSGTVSFYDIKDLHRAIEKY 296 Query: 383 NGFAVAGRKIRVK 421 NG+++ G + VK Sbjct: 297 NGYSIEGNVLDVK 309 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRC-FMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 ++ SNLP++ SDL +F +G V SKG+ T G V++ V DA+ I++ Sbjct: 353 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDSKGAPT--GIAVVEYDNVDDADVCIER 410 Query: 380 KNGFAVAGRKIRVKLA 427 N + G + + A Sbjct: 411 LNNYNYGGCDLDISYA 426
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 51.2 bits (121), Expect = 2e-06 Identities = 24/81 (29%), Positives = 44/81 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+T+FV L ++ L+ F +G V ++ +G++ S+G+G+V F AE+AI Sbjct: 167 PATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAI 226 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 Q+ G + GR I ++ + Sbjct: 227 QEMQGKEIDGRPINCDMSTSK 247 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/79 (27%), Positives = 42/79 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+F+ NL + + +F++ G V + +E KGFG+VQF+ ++DA++A+ Sbjct: 268 TLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDA 327 Query: 380 KNGFAVAGRKIRVKLAIQR 436 G + R +R+ + R Sbjct: 328 LQGEYIDNRPVRLDFSSPR 346
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/72 (34%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE FS GP+ +V + ++ S+GFGF+ F + A A++ Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 383 NGFAVAGRKIRV 418 NG ++ GR+IRV Sbjct: 68 NGESLDGRQIRV 79
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/73 (35%), Positives = 41/73 (56%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV N+PY L+ +FSEVG V +V + + KG+GF ++ + A A++ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 380 KNGFAVAGRKIRV 418 NG +GR +RV Sbjct: 77 LNGREFSGRALRV 89
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 50.8 bits (120), Expect = 2e-06 Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 4/92 (4%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL + LE F+ G + ++ ++ + SKGFGFV F+T ++A +AI +K Sbjct: 323 LFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGK-SKGFGFVCFSTPEEATKAITEK 381 Query: 383 NGFAVAGRKIRVKLA----IQRAPLKERLQKK 466 N VAG+ + V +A ++R+ L +++Q + Sbjct: 382 NQQIVAGKPLYVAIAQRKDVRRSQLAQQIQAR 413 Score = 40.4 bits (93), Expect = 0.003 Identities = 27/90 (30%), Positives = 43/90 (47%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + L FS G + +A+ + SKGFGFV F A+ AI Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSS-KIATDENGKSKGFGFVHFEEEGAAKEAIDAL 185 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 NG + G++I V + R +L++ +A Sbjct: 186 NGMLLNGQEIYVAPHLSRKERDSQLEETKA 215 Score = 35.4 bits (80), Expect = 0.092 Identities = 21/90 (23%), Positives = 43/90 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V N+ + +F++ GP+ + + KGFGFV + +DA +A++ Sbjct: 218 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVE 276 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 N + G K+ V A ++ L+K+ Sbjct: 277 ALNDSELNGEKLYVGRAQKKNERMHVLKKQ 306
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/87 (32%), Positives = 44/87 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VFV +L + D+++ F+ G + +V + SKG+GFV F DAE AI Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQK 463 G + GR+IR A ++ P + Q+ Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQE 185 Score = 42.4 bits (98), Expect = 8e-04 Identities = 23/78 (29%), Positives = 41/78 (52%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P T++V NL + +FS++GP + C M+ S + + FV+F +DA A+ Sbjct: 8 PRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAAL 65 Query: 374 QQKNGFAVAGRKIRVKLA 427 NG + G++++V A Sbjct: 66 AAMNGRKILGKEVKVNWA 83 Score = 29.3 bits (64), Expect = 6.6 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 320 KGFGFVQFATVQDAERAIQQKNGFAVAGRKIR 415 KG+ FV+F+T + A AI NG + G ++ Sbjct: 240 KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 271
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 50.8 bits (120), Expect = 2e-06 Identities = 25/72 (34%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + LE FS GP+ +V + ++ S+GFGF+ F + A A++ Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 383 NGFAVAGRKIRV 418 NG ++ GR+IRV Sbjct: 68 NGESLDGRQIRV 79
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/73 (35%), Positives = 41/73 (56%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV N+PY L+ +FSEVG V +V + + KG+GF ++ + A A++ Sbjct: 17 SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 76 Query: 380 KNGFAVAGRKIRV 418 NG +GR +RV Sbjct: 77 LNGREFSGRALRV 89
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/90 (31%), Positives = 45/90 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV NLPY + S +E F + G + +V K + KGFG+V F A++ Sbjct: 288 SVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKL 347 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + GRK+RV ++ + K++ R Sbjct: 348 NNS-ELMGRKLRVMRSVNKEKFKQQNSNPR 376 Score = 30.4 bits (67), Expect = 3.0 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 17/102 (16%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVG---PVRRCFMVASKGSETSKGF-------------- 328 TVFV NLP T L++ F E G VR ++ ++G+ + K Sbjct: 186 TVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNIN 245 Query: 329 GFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAIQRAPLKER 454 +V F A +A+++ G +IRV LA + + +R Sbjct: 246 AYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKR 287
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 50.8 bits (120), Expect = 2e-06 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 12/101 (11%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL Y K S+LE VFS G + + TSKGF +VQ+A A A + Sbjct: 297 LFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRNL 356 Query: 383 NGFAVAGRKIRVKLAIQ------------RAPLKERLQKKR 469 +G GR + + A Q + PLK++ Q KR Sbjct: 357 DGKIFQGRLLHILPASQKKTYKLDEHELSKLPLKKQKQIKR 397 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + + NLP+ D+ ++F G +R V K +++GFGF F + ++AE A+ Sbjct: 699 IIIKNLPFQATKKDVRSLFGAYGQLRSV-RVPKKFDRSARGFGFADFVSAREAENAMDAL 757 Query: 383 NGFAVAGRKIRVKLAIQRA-PLKERLQK 463 + GR++ ++ A + A +E +Q+ Sbjct: 758 KNTHLLGRRLVLEFANEEAIDAEEEIQR 785 Score = 30.4 bits (67), Expect = 3.0 Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 5/95 (5%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEV-----GPVRRCFMVASKGSETSKGFGFVQFATVQDA 361 +T+F+ NL ++ + L F + ++ + G S GFGF F T A Sbjct: 592 ATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQA 651 Query: 362 ERAIQQKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + A+ NG+ + + V+ + + E +K+ Sbjct: 652 QAALAVMNGYTLDRHTLVVRASHKGMDAAEERRKE 686
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/87 (32%), Positives = 44/87 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VFV +L + D+++ F+ G + +V + SKG+GFV F DAE AI Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQK 463 G + GR+IR A ++ P + Q+ Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPKSTQE 202 Score = 40.0 bits (92), Expect = 0.004 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 15/93 (16%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVA----SKGSETSKGFG---------- 331 P T++V NL + +FS++GP + C M+ S+ +S GF Sbjct: 8 PRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPY 67 Query: 332 -FVQFATVQDAERAIQQKNGFAVAGRKIRVKLA 427 FV+F +DA A+ NG + G++++V A Sbjct: 68 CFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 100 Score = 29.3 bits (64), Expect = 6.6 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 320 KGFGFVQFATVQDAERAIQQKNGFAVAGRKIR 415 KG+ FV+F+T + A AI NG + G ++ Sbjct: 257 KGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 288
>RALY_MOUSE (Q64012) RNA-binding protein Raly (hnRNP associated with lethal| yellow protein) (Maternally expressed hnRNP C-related protein) Length = 312 Score = 50.4 bits (119), Expect = 3e-06 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Frame = +2 Query: 197 STVFVSNL-PYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 S VF+ NL K SD+ET+FS+ G V C KG+ FVQ+A + A A+ Sbjct: 21 SRVFIGNLNTAVVKKSDVETIFSKYGRVAGC--------SVHKGYAFVQYANERHARAAV 72 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 +NG +AG+ + + +A + P + + K+ A Sbjct: 73 LGENGRVLAGQTLDINMAGEPKPNRPKGLKRAA 105
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 50.4 bits (119), Expect = 3e-06 Identities = 25/81 (30%), Positives = 44/81 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+ +FV + + SDL FS+ G V+ +V + SKG+GFV F T +DA++ + Sbjct: 32 PNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAG-VSKGYGFVTFETQEDAQKIL 90 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 Q+ +K+ + AI++ Sbjct: 91 QEAEKLNYKDKKLNIGPAIRK 111
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 50.4 bits (119), Expect = 3e-06 Identities = 25/81 (30%), Positives = 44/81 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+ +FV + + SDL FS+ G V+ +V + SKG+GFV F T +DA++ + Sbjct: 32 PNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAG-VSKGYGFVTFETQEDAQKIL 90 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 Q+ +K+ + AI++ Sbjct: 91 QEAEKLNYKDKKLNIGPAIRK 111
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 4e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C +V + SKG+GFV F T + AERAI++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/90 (27%), Positives = 48/90 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +F + GP ++ + + SKGFGFV F +DA++A+ Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVD 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG + G++I V A ++ + L++K Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRK 279 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 35.4 bits (80), Expect = 0.092 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ +R+ + QR P Sbjct: 71 TMNFDVIKGKPVRIMWS-QRDP 91
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 4e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C +V + SKG+GFV F T + AERAI++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/90 (27%), Positives = 48/90 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +F + GP ++ + + SKGFGFV F +DA++A+ Sbjct: 191 TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVD 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG + G++I V A ++ + L++K Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRK 279 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 35.4 bits (80), Expect = 0.092 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ +R+ + QR P Sbjct: 71 TMNFDVIKGKPVRIMWS-QRDP 91
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 4e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C +V + SKG+GFV F T + AERAI++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/90 (27%), Positives = 48/90 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +F + GP ++ + + SKGFGFV F +DA++A+ Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVD 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG + G++I V A ++ + L++K Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRK 279 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 35.4 bits (80), Expect = 0.092 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ +R+ + QR P Sbjct: 71 TMNFDVIKGKPVRIMWS-QRDP 91
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 50.1 bits (118), Expect = 4e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C +V + SKG+GFV F T + AERAI++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/90 (27%), Positives = 48/90 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +F + GP ++ + + SKGFGFV F +DA++A+ Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVD 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG + G++I V A ++ + L++K Sbjct: 250 EMNGKELNGKQIYVGRAQKKVERQTELKRK 279 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 35.4 bits (80), Expect = 0.092 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ +R+ + QR P Sbjct: 71 TMNFDVIKGKPVRIMWS-QRDP 91
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 50.1 bits (118), Expect = 4e-06 Identities = 26/79 (32%), Positives = 40/79 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 TVFV NL + DL T F G ++ + S KGFG+V F+ + A++ ++ Sbjct: 367 TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVEM 426 Query: 380 KNGFAVAGRKIRVKLAIQR 436 NG +AGR R+ + R Sbjct: 427 -NGHFIAGRPCRLDFSTPR 444 Score = 40.0 bits (92), Expect = 0.004 Identities = 25/91 (27%), Positives = 41/91 (45%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 TVFV L + L F E G + ++ S SKG+G+V F T + A+ A+ Sbjct: 264 TVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAA 323 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 + GR + + L+ R + ++RA Sbjct: 324 NGTKEIDGRMVNLDLSNPRPANPQPYAQQRA 354
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 50.1 bits (118), Expect = 4e-06 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP + ++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 37 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLRLQTKTIKVSYA 115 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG +G I VK A Sbjct: 185 GLNGQKPSGATEPITVKFA 203 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/79 (29%), Positives = 34/79 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + R ++V +A Sbjct: 352 NGYRLGDRVLQVSFKTNKA 370
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 50.1 bits (118), Expect = 4e-06 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP + ++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 44 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 103 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 104 INTLNGLRLQTKTIKVSYA 122 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 132 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 191 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG +G I VK A Sbjct: 192 GLNGQKPSGATEPITVKFA 210 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/79 (29%), Positives = 34/79 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + R ++V +A Sbjct: 359 NGYRLGDRVLQVSFKTNKA 377
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 50.1 bits (118), Expect = 4e-06 Identities = 24/79 (30%), Positives = 41/79 (51%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP + ++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 49 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 108 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 109 INTLNGLRLQTKTIKVSYA 127 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 137 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 196 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG +G I VK A Sbjct: 197 GLNGQKPSGATEPITVKFA 215 Score = 39.7 bits (91), Expect = 0.005 Identities = 23/79 (29%), Positives = 34/79 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + R ++V +A Sbjct: 364 NGYRLGDRVLQVSFKTNKA 382
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 50.1 bits (118), Expect = 4e-06 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL + + L S G + C +V + SKG+GFV F T + AERAI++ Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG--SKGYGFVHFETHEAAERAIKKM 158 Query: 383 NGFAVAGRKIRV 418 NG + GRK+ V Sbjct: 159 NGMLLNGRKVFV 170 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/87 (27%), Positives = 46/87 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V++ N L+ +F + GP ++ + + SKGFGFV F +DA++A+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEM 251 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQK 463 NG + G++I V A ++ + L++ Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKR 278 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 32.3 bits (72), Expect = 0.78 Identities = 20/82 (24%), Positives = 38/82 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S + +V F +DAE A+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ +R+ + QR P Sbjct: 71 TMNFDVIKGKPVRIMWS-QRDP 91
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 50.1 bits (118), Expect = 4e-06 Identities = 24/65 (36%), Positives = 39/65 (60%) Frame = +2 Query: 242 DLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVK 421 DL VFS GP+ +V + + S+GF FV F + D++ A+++ NG + GR+IRV Sbjct: 134 DLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 193 Query: 422 LAIQR 436 +I + Sbjct: 194 YSITK 198
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 50.1 bits (118), Expect = 4e-06 Identities = 24/65 (36%), Positives = 39/65 (60%) Frame = +2 Query: 242 DLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVK 421 DL VFS GP+ +V + + S+GF FV F + D++ A+++ NG + GR+IRV Sbjct: 132 DLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 191 Query: 422 LAIQR 436 +I + Sbjct: 192 YSITK 196
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 50.1 bits (118), Expect = 4e-06 Identities = 22/73 (30%), Positives = 41/73 (56%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FVS L Y S ++ F GP++R +V + + KG+ F+++ +D + A +Q Sbjct: 139 TLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQ 198 Query: 380 KNGFAVAGRKIRV 418 +G + GR++ V Sbjct: 199 ADGQKIDGRRVLV 211
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 49.7 bits (117), Expect = 5e-06 Identities = 29/91 (31%), Positives = 48/91 (52%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S +++F+ NLP D+ FSEVGP++ ++ S ++ + FV + D+E+A Sbjct: 301 SQNSIFIKNLPTITTRDDILNFFSEVGPIKSIYL--SNATKVKYLWAFVTYKNSSDSEKA 358 Query: 371 IQQKNGFAVAGRKIRVKLAIQRAPLKERLQK 463 I++ N F G+ KL + RA KE K Sbjct: 359 IKRYNNFYFRGK----KLLVTRAQDKEERAK 385
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 49.7 bits (117), Expect = 5e-06 Identities = 29/101 (28%), Positives = 48/101 (47%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NLP+ ++ F G V++ + K ++ SKG FV F+ A A + K Sbjct: 316 LFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAK 375 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRACS**LRAKMKR 505 +G GR + + A+ + L E KK A RA+ K+ Sbjct: 376 DGSTFQGRLLHLLPAVNKDALAETGSKKTATLKQARAEQKK 416 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/90 (23%), Positives = 51/90 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + + NLP+ D+ +FS G ++ + K T++GFGFV+++TV++A+ A++ Sbjct: 721 ILIKNLPFEATKRDIRDLFSSQGQLKSV-RLPKKFDNTTRGFGFVEYSTVREAQSAMEAL 779 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 + GR + ++ + + ++++ +R+ Sbjct: 780 KHTHLLGRHLVLQWSHLASSTQQQVDMQRS 809
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 49.7 bits (117), Expect = 5e-06 Identities = 23/79 (29%), Positives = 42/79 (53%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP + +++F +G + C +V K + S G+GFV ++ DA++A Sbjct: 37 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLKLQTKTIKVSYA 115 Score = 42.7 bits (99), Expect = 6e-04 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T ++E +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 185 GLNGQKPLGAAEPITVKFA 203 Score = 36.6 bits (83), Expect = 0.041 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 383 NGFAVAGRKIRV 418 NG+ + R ++V Sbjct: 346 NGYRLGERVLQV 357
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 49.7 bits (117), Expect = 5e-06 Identities = 23/79 (29%), Positives = 42/79 (53%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP + +++F +G + C +V K + S G+GFV ++ DA++A Sbjct: 37 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLKLQTKTIKVSYA 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T ++E +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 185 GLNGQKPLGAAEPITVKFA 203 Score = 36.6 bits (83), Expect = 0.041 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 383 NGFAVAGRKIRV 418 NG+ + R ++V Sbjct: 346 NGYRLGERVLQV 357
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 49.3 bits (116), Expect = 6e-06 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C +V + SKG+GFV F T + AERAI + Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 39.3 bits (90), Expect = 0.006 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L F+ G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/90 (25%), Positives = 43/90 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ F + G ++ + S+GFGFV F +DA++A+ Sbjct: 191 TNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGK-SRGFGFVSFERHEDAQKAVD 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 NG + G+ I V A ++ + L++K Sbjct: 250 DMNGKDLNGKAIFVGRAQKKVERQTELKRK 279 Score = 35.4 bits (80), Expect = 0.092 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ +R+ + QR P Sbjct: 71 TMNFDVIKGKPVRIMWS-QRDP 91
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 49.3 bits (116), Expect = 6e-06 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C +V + SKG+GFV F T + AERAI + Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIDKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/90 (26%), Positives = 46/90 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +F + GP ++ + SKGFGFV F +DA++A+ Sbjct: 191 TNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK-SKGFGFVSFERHEDAQKAVD 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG + G+ + V A ++ + L++K Sbjct: 250 EMNGKDMNGKSMFVGRAQKKVERQTELKRK 279 Score = 38.1 bits (87), Expect = 0.014 Identities = 24/75 (32%), Positives = 38/75 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L F G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLA 427 NG VA + + V LA Sbjct: 354 NGRIVATKPLYVALA 368 Score = 37.4 bits (85), Expect = 0.024 Identities = 23/82 (28%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + GR +R+ + QR P Sbjct: 71 TMNFDVIKGRPVRIMWS-QRDP 91
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/81 (28%), Positives = 44/81 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P ++V +L + L +F G + ++ + SKG+GF+ F+ + A++A+ Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 +Q NGF +AGR ++V +R Sbjct: 309 EQLNGFELAGRPMKVGHVTER 329 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/58 (37%), Positives = 29/58 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 TVF L + DLE FS VG VR M++ + S S+G +V+F V AI Sbjct: 154 TVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAI 211
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/81 (28%), Positives = 44/81 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P ++V +L + L +F G + ++ + SKG+GF+ F+ + A++A+ Sbjct: 249 PMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKAL 308 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 +Q NGF +AGR ++V +R Sbjct: 309 EQLNGFELAGRPMKVGHVTER 329 Score = 42.4 bits (98), Expect = 8e-04 Identities = 23/58 (39%), Positives = 29/58 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 TVF L + DLE FS VG VR M++ + S SKG +V+F V AI Sbjct: 154 TVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAI 211
>PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-binding protein| crp79) (Poly(A)-binding protein) (PABP) (Meiotic expression up-regulated protein 5) Length = 710 Score = 49.3 bits (116), Expect = 6e-06 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Frame = +2 Query: 194 PSTVFVSNLPYTYKS--SDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAER 367 PS ++V NL T + S LE +FS G + + S SKG+GFV F ++ A R Sbjct: 381 PSNLYVKNLDDTVITCKSQLEDLFSPFGSILSSMLACYPNSGISKGYGFVAFRQIEAAVR 440 Query: 368 AIQQKNGFAVAGRKIRVKLAIQRAPLKERLQ 460 A NG V ++I V A +++ RLQ Sbjct: 441 AKDTLNGMMVGKKRIFVCFAERKSDRIRRLQ 471 Score = 32.3 bits (72), Expect = 0.78 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 12/90 (13%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCF---MVASKGSETSKGF---------GFVQ 340 ST++V N+ ++ FS+ G V F + + E +K F GFV+ Sbjct: 17 STIYVGNIDSRLSDEEIIKHFSKYGQVESIFRRLLDSFYPKEKAKPFKPPKNGVQYGFVK 76 Query: 341 FATVQDAERAIQQKNGFAVAGRKIRVKLAI 430 F + E ++ G + RK+ +K + Sbjct: 77 FVNAESIEEVLKDAKGMTLGQRKLTIKARV 106
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + + V+ LP +L +F +GP+ C ++ + S G+ FV FA D++RAI+ Sbjct: 110 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 169 Query: 377 QKNGFAVAGRKIRVKLA 427 NG V ++++V A Sbjct: 170 SLNGITVRNKRLKVSYA 186 Score = 39.3 bits (90), Expect = 0.006 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V+NLP T L+T+F + G + + ++ K + +G FV+F ++A+ AI Sbjct: 196 TNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAIS 255 Query: 377 QKNGFAVAG--RKIRVKLAIQRAPLK 448 N G + + V+LA + K Sbjct: 256 ALNNVIPEGASQPLTVRLAEEHGKAK 281
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/79 (30%), Positives = 42/79 (53%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + + LP +L+++F +G + C +V K + S G+GFV + +DAE+A Sbjct: 37 SKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 96 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I NG + + I+V A Sbjct: 97 INTLNGLRLQTKTIKVSYA 115 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++VS LP T +LE +FS+ G + ++ + + S+G GF++F +AE AI+ Sbjct: 125 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 184 Query: 377 QKNGFAVAG--RKIRVKLA 427 NG G I VK A Sbjct: 185 GLNGQKPPGATEPITVKFA 203 Score = 37.7 bits (86), Expect = 0.019 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NL S L +F G V ++ + KGFGFV +A AI Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 383 NGFAVAGRKIRV 418 NG+ + R ++V Sbjct: 338 NGYRLGDRVLQV 349
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/69 (37%), Positives = 41/69 (59%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV NLPY +++ VF VR ++ +GS SKG +++F T +AE+A+++ Sbjct: 372 TLFVKNLPYRVTEDEMKNVFENALEVR--LVLNKEGS--SKGMAYIEFKTEAEAEKALEE 427 Query: 380 KNGFAVAGR 406 K G V GR Sbjct: 428 KQGTEVDGR 436 Score = 42.7 bits (99), Expect = 6e-04 Identities = 21/76 (27%), Positives = 38/76 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ V+NL Y L+ +F + ++ + KG+ FV+F T +DA+ A+ Sbjct: 462 TLIVNNLSYAASEETLQELFKKATSIK----MPQNNQGRPKGYAFVEFPTAEDAKEALNS 517 Query: 380 KNGFAVAGRKIRVKLA 427 N + GR IR++ + Sbjct: 518 CNNTEIEGRAIRLEFS 533 Score = 33.5 bits (75), Expect = 0.35 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +2 Query: 290 MVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVKLA 427 +V + + +SKGFGFV F++ +DA+ A + + G K+ + A Sbjct: 581 IVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFA 626
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 48.9 bits (115), Expect = 8e-06 Identities = 23/81 (28%), Positives = 44/81 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+ +FV + + +DL FS+ G V+ +V + SKG+GF+ F T +DA++ + Sbjct: 32 PNRIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDRAG-VSKGYGFITFETQEDAQKIL 90 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 Q+ +K+ + AI++ Sbjct: 91 QEAEKLNYKDKKLNIGPAIRK 111
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/80 (31%), Positives = 44/80 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FVS + + +L+ +FS+ G V ++ ++ S+GFGF+ F+TV++A AI Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162 Query: 383 NGFAVAGRKIRVKLAIQRAP 442 N GR + V+ A + P Sbjct: 163 NSQEFYGRVLNVQKAKRSRP 182
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 48.9 bits (115), Expect = 8e-06 Identities = 22/76 (28%), Positives = 41/76 (53%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V+++ D+++VF GP+ C + T KG+GF+++A Q + AI Sbjct: 229 IYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASM 288 Query: 383 NGFAVAGRKIRVKLAI 430 N F + G+ +RV +I Sbjct: 289 NLFDLGGQLLRVGRSI 304 Score = 47.0 bits (110), Expect = 3e-05 Identities = 21/72 (29%), Positives = 39/72 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V ++ + K + F+ GP++ M ++ KGF FV++ + A+ A++Q Sbjct: 132 VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 191 Query: 383 NGFAVAGRKIRV 418 NG + GR I+V Sbjct: 192 NGALMGGRNIKV 203
>RALY_HUMAN (Q9UKM9) RNA-binding protein Raly (hnRNP associated with lethal| yellow homolog) (Autoantigen p542) Length = 306 Score = 48.5 bits (114), Expect = 1e-05 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 1/93 (1%) Frame = +2 Query: 197 STVFVSNLPYTY-KSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 S VF+ NL K SD+ET+FS+ G V C KG+ FVQ++ + A A+ Sbjct: 21 SRVFIGNLNTALVKKSDVETIFSKYGRVAGC--------SVHKGYAFVQYSNERHARAAV 72 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 +NG +AG+ + + +A + P + + K+ A Sbjct: 73 LGENGRVLAGQTLDINMAGEPKPDRPKGLKRAA 105
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 48.5 bits (114), Expect = 1e-05 Identities = 23/79 (29%), Positives = 42/79 (53%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP +L +F +GP+ C ++ + S G+ FV F + D++RA Sbjct: 125 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 184 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I+ NG V ++++V A Sbjct: 185 IKVLNGITVRNKRLKVSYA 203 Score = 38.5 bits (88), Expect = 0.011 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V+NLP T L+T+F + G + + ++ K + +G FV++ ++A+ AI Sbjct: 213 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 272 Query: 377 QKNGFAVAG--RKIRVKLAIQRAPLK 448 N G + + V+LA + K Sbjct: 273 ALNNVIPEGGSQPLSVRLAQEHGKAK 298
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 48.5 bits (114), Expect = 1e-05 Identities = 23/79 (29%), Positives = 42/79 (53%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + + V+ LP +L +F +GP+ C ++ + S G+ FV F + D++RA Sbjct: 123 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRA 182 Query: 371 IQQKNGFAVAGRKIRVKLA 427 I+ NG V ++++V A Sbjct: 183 IKVLNGITVRNKRLKVSYA 201 Score = 38.5 bits (88), Expect = 0.011 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V+NLP T L+T+F + G + + ++ K + +G FV++ ++A+ AI Sbjct: 211 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 270 Query: 377 QKNGFAVAG--RKIRVKLAIQRAPLK 448 N G + + V+LA + K Sbjct: 271 ALNNVIPEGGSQPLSVRLAEEHGKAK 296
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V NL Y L VF + G V ++ + ++ S+GF FV+F +DAE A+ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 389 FAVAGRKIRVKLA 427 + GR++RV++A Sbjct: 77 AVLDGRELRVQMA 89
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V NL Y L VF + G V ++ + ++ S+GF FV+F +DAE A+ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 389 FAVAGRKIRVKLA 427 + GR++RV++A Sbjct: 77 AVLDGRELRVQMA 89
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V NL Y L VF + G V ++ + ++ S+GF FV+F +DAE A+ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 389 FAVAGRKIRVKLA 427 + GR++RV++A Sbjct: 77 AVLDGRELRVQMA 89
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V NL Y L VF + G V ++ + ++ S+GF FV+F +DAE A+ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 389 FAVAGRKIRVKLA 427 + GR++RV++A Sbjct: 77 AVLDGRELRVQMA 89
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/64 (39%), Positives = 33/64 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V+V NL + DL+ F E G + +V G SKGFGFV F DA RA++ Sbjct: 215 TNVYVKNLAESTTDDDLKNAFGEYGKITSA-VVMKDGEGKSKGFGFVNFENADDAARAVE 273 Query: 377 QKNG 388 NG Sbjct: 274 SLNG 277 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/78 (33%), Positives = 43/78 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + L FS G + C VA S SKG+GFVQ+A + A++AI++ Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSC-KVAVDSSGQSKGYGFVQYANEESAQKAIEKL 184 Query: 383 NGFAVAGRKIRVKLAIQR 436 NG + +++ V ++R Sbjct: 185 NGMLLNDKQVYVGPFLRR 202 Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/88 (31%), Positives = 46/88 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S ++V NL + L+ +FS G V ++ TSKG GFV FAT ++A A+ Sbjct: 318 SNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNG-TSKGSGFVAFATPEEATEAMS 376 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQ 460 Q +G + + + V +A ++ + RLQ Sbjct: 377 QLSGKMIESKPLYVAIAQRKEDRRVRLQ 404 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/74 (32%), Positives = 39/74 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + S L F ++G V + + S G+G+V F QDA RAIQ Sbjct: 36 TSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95 Query: 377 QKNGFAVAGRKIRV 418 + N + G+ IRV Sbjct: 96 ELNYIPLYGKPIRV 109
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V NL Y L VF + G V ++ + ++ S+GF FV+F +DAE A+ +G Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77 Query: 389 FAVAGRKIRVKLA 427 + GR++RV++A Sbjct: 78 AVLDGRELRVQMA 90
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/85 (32%), Positives = 45/85 (52%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV NLPY + S LE F + G + +V + + +GFG+V F DA + Sbjct: 292 SVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENT-DAVHLALK 350 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKER 454 N + GRK+RV ++ + LK++ Sbjct: 351 LNNSELMGRKLRVMRSVNKEKLKQQ 375 Score = 34.3 bits (77), Expect = 0.20 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 17/102 (16%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVG---PVRRCFMVASKGSETSKGF-------------- 328 TVFV NLP T L++ F E G VR ++ ++G+ T K Sbjct: 190 TVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSIN 249 Query: 329 GFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAIQRAPLKER 454 +V F A +A+Q+ G +IRV LA + A +R Sbjct: 250 AYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASRDKR 291
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 48.1 bits (113), Expect = 1e-05 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V+V N + L+ F G + + V SK SKGFGFV F T + AE A+Q Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPYGKITS-YKVMSKEDGKSKGFGFVAFETTEAAEAAVQ 241 Query: 377 QKNGFAVA-GRKIRVKLAIQRAPLKERLQKK 466 NG + G+ + V A ++A ++ L++K Sbjct: 242 ALNGKDMGEGKSLYVARAQKKAERQQELKRK 272 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/88 (32%), Positives = 44/88 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + + FS G + C VA+ SKG+GFV F T + A +I + Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSC-KVATDEKGNSKGYGFVHFETEEAANTSIDKV 150 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKK 466 NG + G+K+ V I R ++ L +K Sbjct: 151 NGMLLNGKKVYVGKFIPRKEREKELGEK 178 Score = 40.4 bits (93), Expect = 0.003 Identities = 27/86 (31%), Positives = 40/86 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +LP S L FS GPV + + S G+ +V F DAERA+ Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 61 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKER 454 N V + IR+ + QR P R Sbjct: 62 TMNFDLVRNKPIRIMWS-QRDPSLRR 86 Score = 40.0 bits (92), Expect = 0.004 Identities = 26/85 (30%), Positives = 39/85 (45%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL T L FS G + ++ + SKGFGFV F +A A+ + Sbjct: 289 LYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGR-SKGFGFVCFNAASEATCAVTEL 347 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERL 457 NG V + + V LA ++ K L Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHL 372
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +++V NL Y +DL VF+E G V+R + + + +GFGFV+ + AI+ Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 380 KNGFAVAGRKIRVKLAIQR 436 +G GR ++V A R Sbjct: 62 LDGAEWMGRDLKVNKAKPR 80
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV LPY D+ VFS+ G + +V K + SKGF F+ + + A+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 383 NGFAVAGRKIRV-KLAIQRAP 442 NG + GR IRV ++ RAP Sbjct: 98 NGIKIKGRTIRVDHVSNYRAP 118
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ NLPY +L+ VF + +R +V+ G SKG +++F T DAE+ ++ Sbjct: 393 TLLAKNLPYKVTQDELKEVFEDAAEIR---LVSKDGK--SKGIAYIEFKTEADAEKTFEE 447 Query: 380 KNGFAVAGRKI 412 K G + GR I Sbjct: 448 KQGTEIDGRSI 458 Score = 45.8 bits (107), Expect = 7e-05 Identities = 27/90 (30%), Positives = 46/90 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ +SNL Y+ L+ VF + ++ V + SKG+ F++FA+ +DA+ A+ Sbjct: 486 TLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAKEALNS 541 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + GR IR++L R R Q + Sbjct: 542 CNKREIEGRAIRLELQGPRGSPNARSQPSK 571 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F G VR +V + + +SKGFGFV F + +DA+ A + Sbjct: 572 TLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 628 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 629 MEDGEIDGNKVTLDWA 644
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ NLPY +L+ VF + +R +V+ G SKG +++F T DAE+ ++ Sbjct: 394 TLLAKNLPYKVTQDELKEVFEDAAEIR---LVSKDGK--SKGIAYIEFKTEADAEKTFEE 448 Query: 380 KNGFAVAGRKI 412 K G + GR I Sbjct: 449 KQGTEIDGRSI 459 Score = 45.8 bits (107), Expect = 7e-05 Identities = 27/90 (30%), Positives = 46/90 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ +SNL Y+ L+ VF + ++ V + SKG+ F++FA+ +DA+ A+ Sbjct: 487 TLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAKEALNS 542 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + GR IR++L R R Q + Sbjct: 543 CNKREIEGRAIRLELQGPRGSPNARSQPSK 572 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F G VR +V + + +SKGFGFV F + +DA+ A + Sbjct: 573 TLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 629 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 630 MEDGEIDGNKVTLDWA 645
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 47.8 bits (112), Expect = 2e-05 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 12/93 (12%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVAS-----------KGSET-SKGFGFV 337 P++++VS L T + L+ +F P R V S +G + +GFGFV Sbjct: 204 PNSIYVSGLSVTLTNEGLKEMFDAYNPTRARIAVRSLPPYIIRRIKLRGEQRRGRGFGFV 263 Query: 338 QFATVQDAERAIQQKNGFAVAGRKIRVKLAIQR 436 FA +D RAI++ NG V + VK A+ R Sbjct: 264 SFANAEDQSRAIEEMNGKQVGDLTLVVKSAVFR 296
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ NLPY +L+ VF + +R +V+ G SKG +++F T DAE+ ++ Sbjct: 395 TLLAKNLPYKVTQDELKEVFEDAAEIR---LVSKDGK--SKGIAYIEFKTEADAEKTFEE 449 Query: 380 KNGFAVAGRKI 412 K G + GR I Sbjct: 450 KQGTEIDGRSI 460 Score = 45.8 bits (107), Expect = 7e-05 Identities = 27/90 (30%), Positives = 46/90 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ +SNL Y+ L+ VF + ++ V + SKG+ F++FA+ +DA+ A+ Sbjct: 488 TLVLSNLSYSATEETLQEVFEKATFIK----VPQNQNGKSKGYAFIEFASFEDAKEALNS 543 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + GR IR++L R R Q + Sbjct: 544 CNKREIEGRAIRLELQGPRGSPNARSQPSK 573 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F G VR +V + + +SKGFGFV F + +DA+ A + Sbjct: 574 TLFVKGLSEDTTEETLKESFD--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 630 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 631 MEDGEIDGNKVTLDWA 646
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/73 (31%), Positives = 39/73 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV+ + Y S L F GP++R MV SK S +G+ F+++ +D A + Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 Query: 380 KNGFAVAGRKIRV 418 +G + GR++ V Sbjct: 164 ADGKKIDGRRVLV 176
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/85 (32%), Positives = 44/85 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 +VFV NLPY S LE F + G + +V + + +GFG+V F DA + Sbjct: 286 SVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENT-DAVHLALK 344 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKER 454 N + GRK+RV ++ + LK++ Sbjct: 345 LNNSELMGRKLRVMRSVNKEKLKQQ 369 Score = 33.5 bits (75), Expect = 0.35 Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 17/102 (16%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVR----RCFM-----VASKGSETSKGF-------- 328 TVFV NLP T L++ F E G V R M ++ K + + F Sbjct: 184 TVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSIN 243 Query: 329 GFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAIQRAPLKER 454 +V F + A +A+Q+ G +IRV LA + A +R Sbjct: 244 AYVVFKEERAAAKALQRNGAQIAEGFRIRVDLASETASRDKR 285
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +T+ V+NL + +DL+ +F G + R ++ K + SKGF F+ F +DA RAI Sbjct: 239 ATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298 Query: 377 QKNGF 391 +GF Sbjct: 299 GVSGF 303
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +T+ V+NL + +DL+ +F G + R ++ K + SKGF F+ F +DA RAI Sbjct: 239 ATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIA 298 Query: 377 QKNGF 391 +GF Sbjct: 299 GVSGF 303
>PM14_ARATH (Q9FMP4) Pre-mRNA branch site p14-like protein| Length = 124 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/90 (27%), Positives = 49/90 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP+ S ++ +F + G +R+ + K + KG FV + + DA+ A+ Sbjct: 21 LYVRNLPFNITSEEMYDIFGKYGAIRQIRIGCDKAT---KGTAFVVYEDIYDAKNAVDHL 77 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 +GF VA R + + L Q A + ++ +K++ Sbjct: 78 SGFNVANRYL-IVLYYQHAKMSKKFDQKKS 106
>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)| Length = 261 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++F+ N+ + DL F GP+ ++ + +GF +VQF V+DAE A+ Sbjct: 10 TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALY 69 Query: 377 QKNGFAVAGRKIRVKLA--IQRAPLKERLQKKRACS 478 N V GR+I ++ A ++ P + + +++ CS Sbjct: 70 NLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHPCS 105
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/73 (31%), Positives = 39/73 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV+ + Y S L F GP++R MV SK S +G+ F+++ +D A + Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 Query: 380 KNGFAVAGRKIRV 418 +G + GR++ V Sbjct: 164 ADGKKIDGRRVLV 176
>HNRPC_XENLA (P19600) Heterogeneous nuclear ribonucleoprotein C (hnRNP core| protein C) Length = 282 Score = 47.0 bits (110), Expect = 3e-05 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +2 Query: 197 STVFVSNL-PYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 S VF+ NL K +D+E +FS+ G + C KGF FVQF+ + A A+ Sbjct: 17 SRVFIGNLNTLVVKKTDVEAIFSKYGKIVGC--------SVHKGFAFVQFSNERTARTAV 68 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 ++G +AG+ + + LA + + + KR+ + Sbjct: 69 AGEDGRMIAGQVLDINLAAEPKANRSKTGVKRSAA 103
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP+ + L+ F+E G V + G SKG G V+F + + AERA + Sbjct: 654 IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGK--SKGCGVVKFESPEVAERACRMM 711 Query: 383 NGFAVAGRKIRVKL 424 NG ++GR+I V++ Sbjct: 712 NGMKLSGREIDVRI 725 Score = 43.1 bits (100), Expect = 4e-04 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 STVFV+NL Y L+ VFS G V R ++ K + S+G G V F +A +AI Sbjct: 203 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGK-SRGIGTVTFEQSIEAVQAIS 261 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 NG + R + VK+ + P Sbjct: 262 MFNGQLLFDRPMHVKMDERALP 283 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSE-VGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 F++N+P+ K L+ + E VG V ++ + S+G V+F + ++A + Sbjct: 73 FITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGK-SRGCAVVEFKMEESMKKAAEVL 131 Query: 383 NGFAVAGRKIRVK 421 N +++GR ++VK Sbjct: 132 NKHSLSGRPLKVK 144
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP+ + L+ F+E G V + G SKG G V+F + + AERA + Sbjct: 653 IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGK--SKGCGVVKFESPEVAERACRMM 710 Query: 383 NGFAVAGRKIRVKL 424 NG ++GR+I V++ Sbjct: 711 NGMKLSGREIDVRI 724 Score = 43.9 bits (102), Expect = 3e-04 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 STVFV+NL Y L+ VFS G V R ++ K + S+G G V F +A +AI Sbjct: 202 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGK-SRGIGIVTFEQSIEAVQAIS 260 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 NG + R + VK+ + P Sbjct: 261 MFNGQLLFDRPMHVKMDERALP 282 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSE-VGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 F++N+P+ K L+ + E VG V ++ + S+G V+F + ++A + Sbjct: 72 FITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGK-SRGCAVVEFKMEESMKKAAEVL 130 Query: 383 NGFAVAGRKIRVK 421 N +++GR ++VK Sbjct: 131 NKHSLSGRPLKVK 143
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP+ + L+ F+E G V + G SKG G V+F + + AERA + Sbjct: 614 IFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGK--SKGCGVVKFESPEVAERACRMM 671 Query: 383 NGFAVAGRKIRVKL 424 NG ++GR+I V++ Sbjct: 672 NGMKLSGREIDVRI 685 Score = 43.1 bits (100), Expect = 4e-04 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 STVFV+NL Y L+ VFS G V R ++ K + S+G G V F +A +AI Sbjct: 163 STVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGK-SRGIGTVTFEQSIEAVQAIS 221 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 NG + R + VK+ + P Sbjct: 222 MFNGQLLFDRPMHVKMDERALP 243 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSE-VGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 F++N+P+ K L+ + E VG V ++ + S+G V+F + ++A + Sbjct: 72 FITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGK-SRGCAVVEFKMEESMKKAAEVL 130 Query: 383 NGFAVAGRKIRVK 421 N +++GR ++VK Sbjct: 131 NKHSLSGRPLKVK 143
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + + L FS G + C +V + S+G+GFV F T + A RAIQ Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/90 (28%), Positives = 43/90 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L +FS G V + S+GFGFV + ++A++A+ Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSV-KVMMDDTGRSRGFGFVNYGNHEEAQKAVS 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG V GR I V A +R + L++K Sbjct: 250 EMNGKEVNGRMIYVGRAQKRIERQGELKRK 279 Score = 40.0 bits (92), Expect = 0.004 Identities = 25/82 (30%), Positives = 42/82 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGH--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLAIQRAPLK 448 NG V+ + + V LA ++ K Sbjct: 354 NGRIVSTKPLYVALAQRKEERK 375 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/82 (28%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GP+ + + S G+ ++ F DAERA+ Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + GR IR+ + QR P Sbjct: 71 TMNFEVIKGRPIRIMWS-QRDP 91
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 47.0 bits (110), Expect = 3e-05 Identities = 23/73 (31%), Positives = 43/73 (58%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NLP + ++E +F + G ++ + + +G F FV+F +DAE A++ + Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGP----AFAFVEFEDHRDAEDAVRAR 66 Query: 383 NGFAVAGRKIRVK 421 +G+ GR+IRV+ Sbjct: 67 DGYEFDGRRIRVE 79
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 47.0 bits (110), Expect = 3e-05 Identities = 26/83 (31%), Positives = 42/83 (50%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+ +FV + +DL VFS G V+ ++ + SKG+GFV F T Q+A+R Sbjct: 32 PNRIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDRAG-VSKGYGFVTFETEQEAQRLQ 90 Query: 374 QQKNGFAVAGRKIRVKLAIQRAP 442 + RK+ + AI++ P Sbjct: 91 ADGECVVLRDRKLNIAPAIKKQP 113
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP+ L+ FS+ G V + G SKG G V+F + + AE+A + Sbjct: 516 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK--SKGCGTVRFESAESAEKACRIM 573 Query: 383 NGFAVAGRKIRVKL 424 NG ++GR+I V+L Sbjct: 574 NGIKISGREIDVRL 587 Score = 42.7 bits (99), Expect = 6e-04 Identities = 28/82 (34%), Positives = 42/82 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ST+FV+NL + L+ VFS G V+R + K + S+G G V F +A +AI Sbjct: 224 STIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGK-SRGMGTVTFEQAIEAVQAIS 282 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 NG + R + VK+ + P Sbjct: 283 MFNGQFLFDRPMHVKMDDKSVP 304 Score = 37.4 bits (85), Expect = 0.024 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSE-VGPVRRCFMVASKGSE-TSKGFGFVQFATVQDAERAIQ 376 VF+SN+PY K ++ + E VG V ++ K +E S+G G V+F + ++A++ Sbjct: 93 VFISNIPYDMKWQAIKDLMREKVGEVT--YVELFKDAEGKSRGCGVVEFKDEEFVKKALE 150 Query: 377 QKNGFAVAGRKIRVK 421 N + ++GR + +K Sbjct: 151 TMNKYDLSGRPLNIK 165
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/90 (30%), Positives = 45/90 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ +SNL Y+ L+ VF + ++ V SKG+ F++FA+ +DA+ A+ Sbjct: 486 TLVLSNLSYSATEETLQEVFEKATFIK----VPQNQQGKSKGYAFIEFASFEDAKEALNS 541 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + GR IR++L R R Q + Sbjct: 542 CNKMEIEGRTIRLELQGPRGSPNARSQPSK 571 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/93 (25%), Positives = 46/93 (49%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ NL + +L+ VF + +R +V+ G SKG +++F + DAE+ +++ Sbjct: 394 TLLAKNLSFNITEDELKEVFEDALEIR---LVSQDGK--SKGIAYIEFKSEADAEKNLEE 448 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 K G + GR + + ++ +ER K S Sbjct: 449 KQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWS 481 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F G VR +V + + +SKGFGFV F + +DA+ A + Sbjct: 572 TLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 628 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 629 MEDGEIDGNKVTLDWA 644
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/76 (31%), Positives = 40/76 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +F+ +LP + DL +F G V + K + SK FGFV + A+ AIQ Sbjct: 401 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ 460 Query: 377 QKNGFAVAGRKIRVKL 424 NGF + ++++V+L Sbjct: 461 SMNGFQIGMKRLKVQL 476
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/76 (31%), Positives = 40/76 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +F+ +LP + DL +F G V + K + SK FGFV + A+ AIQ Sbjct: 401 ANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQ 460 Query: 377 QKNGFAVAGRKIRVKL 424 NGF + ++++V+L Sbjct: 461 SMNGFQIGMKRLKVQL 476
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETS---KGFGFVQFATVQDAERA 370 T+FV+ + Y S L F GP++R +V +KGSE S +G+ F+++ +D A Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYAFIEYEHERDMHSA 163 Query: 371 IQQKNGFAVAGRKIRV 418 + +G + GR++ V Sbjct: 164 YKHADGKKIDGRRVLV 179
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSET-SKGFGFVQFATVQDAERAIQQKN 385 VSN+ + D++ +F G + F+ + + SKGFG++Q+ A A+++ N Sbjct: 344 VSNIHFNLTDEDVKAIFEPFGDIE--FVHLQRDDQNRSKGFGYIQYRNPISARNALEKMN 401 Query: 386 GFAVAGRKIRVKL 424 GF +AGR +RV L Sbjct: 402 GFDLAGRNMRVCL 414 Score = 41.2 bits (95), Expect = 0.002 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 TVFVS L S +L F + GPVR +V K S SKG +V+F +D+ +A Sbjct: 241 TVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCH-EDSVQAAIA 299 Query: 380 KNGFAVAGRKIRVKL--AIQRAPLKERLQKKRACS 478 +G + G + V+L A + +E + RA S Sbjct: 300 LSGKRLLGLPVIVQLTEAEKNRKAREAAELARAAS 334
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + + L FS G + C +V + S+G+GFV F T + A RAIQ Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/90 (28%), Positives = 44/90 (48%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +FS G V S S+GFGFV + ++A++A+ Sbjct: 191 TNVYIKNFGEDMDDKRLKEIFSAFGNTLSV-KVMMDNSGRSRGFGFVNYGNHEEAQKAVT 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG V GR + V A +R + L++K Sbjct: 250 EMNGKEVNGRMVYVGRAQKRIERQGELKRK 279 Score = 39.7 bits (91), Expect = 0.005 Identities = 25/82 (30%), Positives = 42/82 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGH--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLAIQRAPLK 448 NG V+ + + V LA ++ K Sbjct: 354 NGRIVSTKPLYVALAQRKEERK 375 Score = 37.4 bits (85), Expect = 0.024 Identities = 22/82 (26%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++++ +L + L FS GP+ + + S G+ ++ F DAERA+ Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + GR IR+ + QR P Sbjct: 71 TMNFEVIKGRPIRIMWS-QRDP 91
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + + L FS G + C +V + S+G+GFV F T + A RAIQ Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 43.9 bits (102), Expect = 3e-04 Identities = 27/90 (30%), Positives = 43/90 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L +FS G V S S+GFGFV + ++A++A+ Sbjct: 191 TNVYIKNFGEDMDDKRLREIFSAFGNTLSV-KVMMDDSGRSRGFGFVNYGNHEEAQKAVS 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG V GR I V A +R + L++K Sbjct: 250 EMNGKEVNGRMIYVGRAQKRIERQSELKRK 279 Score = 37.7 bits (86), Expect = 0.019 Identities = 24/82 (29%), Positives = 41/82 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NL L F G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGH--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLAIQRAPLK 448 NG V+ + + V LA ++ K Sbjct: 354 NGRIVSTKPLYVALAQRKEERK 375 Score = 35.0 bits (79), Expect = 0.12 Identities = 21/82 (25%), Positives = 38/82 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++++ +L + L FS GP+ + + S + ++ F DAERA+ Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + GR IR+ + QR P Sbjct: 71 TMNFEVIKGRPIRIMWS-QRDP 91
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ LPY D+ VFS+ G + +V K + SKGF F+ + + A+ Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97 Query: 383 NGFAVAGRKIRV-KLAIQRAP 442 NG + GR IRV ++ RAP Sbjct: 98 NGIKIKGRTIRVDHVSNYRAP 118
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 46.6 bits (109), Expect = 4e-05 Identities = 20/89 (22%), Positives = 50/89 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++VS LP+ + +L F++ G ++ + +K + S+ +GF++F +DA A + Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + + G ++V++ + A +++ + K+ Sbjct: 153 NNYLLMGHLLQVRVLPKGAKIEKLYKYKK 181
>SFRS7_MOUSE (Q8BL97) Splicing factor, arginine/serine-rich 7| Length = 267 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/79 (32%), Positives = 43/79 (54%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S + V+V NL +LE FS GP+R ++ + GF FV+F +DAE A Sbjct: 38 SETKVYVGNLGTGAGKGELERAFSYYGPLRTVWI-----ARNPPGFAFVEFEDPRDAEDA 92 Query: 371 IQQKNGFAVAGRKIRVKLA 427 ++ +G + G ++RV+L+ Sbjct: 93 VRGLDGKVICGSRVRVELS 111
>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6| (RNA-binding protein srp-1) (CeSRp20) Length = 179 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/75 (32%), Positives = 42/75 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V LP S +LE +F G +R+ ++ + GF FV++ V+DAE A++ Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRAL 59 Query: 383 NGFAVAGRKIRVKLA 427 +G + G + RV+L+ Sbjct: 60 DGSRICGVRARVELS 74
>HNRPC_MOUSE (Q9Z204) Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 /| hnRNP C2) Length = 313 Score = 46.2 bits (108), Expect = 5e-05 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +2 Query: 197 STVFVSNL-PYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 S VF+ NL K SD+E +FS+ G + C KGF FVQ+ ++A A+ Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGC--------SVHKGFAFVQYVNERNARAAV 67 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 ++G +AG+ + + LA + + + KR+ + Sbjct: 68 AGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAA 102
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/90 (30%), Positives = 45/90 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ +SNL Y+ L+ VF + ++ V SKG+ F++FA+ +DA+ A+ Sbjct: 489 TLVLSNLSYSATEETLQEVFEKATFIK----VPQNPHGKSKGYAFIEFASFEDAKEALNS 544 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 N + GR IR++L R R Q + Sbjct: 545 CNKMEIEGRTIRLELQGPRGSPNARSQPSK 574 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/93 (25%), Positives = 46/93 (49%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ NL + +L+ VF + +R +V+ G SKG +++F + DAE+ +++ Sbjct: 397 TLLAKNLSFNITEDELKEVFEDAVEIR---LVSQDGR--SKGIAYIEFKSEADAEKNLEE 451 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 K G + GR + + ++ +ER K S Sbjct: 452 KQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWS 484 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F G VR +V + + +SKGFGFV F + +DA+ A + Sbjct: 575 TLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 631 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 632 MEDGEIDGNKVTLDWA 647
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/79 (30%), Positives = 44/79 (55%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S + + NLP+ DL +F G ++ V K ++++GF FV+F +++AE A+ Sbjct: 717 SKIIIKNLPFEATRKDLLELFGAFGQLKSV-RVPKKFDQSARGFAFVEFNLMKEAETAMS 775 Query: 377 QKNGFAVAGRKIRVKLAIQ 433 Q G + GR++ ++ A Q Sbjct: 776 QLEGVHLLGRRLVMQYAEQ 794 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 12/101 (11%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ N+ Y D ++FS+ G + + + SKGF +VQF +DA RA + Sbjct: 312 LFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRSL 371 Query: 383 NGFAVAGRKIRV------------KLAIQRAPLKERLQKKR 469 + GR + + + ++ PLK++ + K+ Sbjct: 372 DKQIFQGRLLHILPADKKKDHRLDEFDLKNLPLKKQRELKK 412 Score = 39.3 bits (90), Expect = 0.006 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 5/80 (6%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSE-----VGPVRRCFMVASKGSETSKGFGFVQFATVQDAER 367 VFV NL + L +F V V+ + G S GFGFV+F T + A Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 368 AIQQKNGFAVAGRKIRVKLA 427 AI +G + G K+++KL+ Sbjct: 679 AISTLDGHVLDGHKLQLKLS 698 Score = 35.4 bits (80), Expect = 0.092 Identities = 22/77 (28%), Positives = 36/77 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S + V LP Y L FS+ G V ++ + E+ K F F+ + + AERA++ Sbjct: 2 SRLIVKGLPKYYTEEKLREFFSKQGDVTDVKLMKKRNGESRK-FAFIGYKSADAAERAVK 60 Query: 377 QKNGFAVAGRKIRVKLA 427 N + +I V+ A Sbjct: 61 YFNKSFIDTARIEVEFA 77
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/73 (30%), Positives = 39/73 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV+ + Y S L F GP++R MV +K S +G+ F+++ +D A + Sbjct: 104 TLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKH 163 Query: 380 KNGFAVAGRKIRV 418 +G + GR++ V Sbjct: 164 ADGKKIDGRRVLV 176
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/77 (29%), Positives = 40/77 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + + V+ LP +L +F GP+ C ++ + S G+ FV FA+ DA+ AI+ Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 161 Query: 377 QKNGFAVAGRKIRVKLA 427 NG V ++++V A Sbjct: 162 TVNGITVRNKRLKVSYA 178
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 46.2 bits (108), Expect = 5e-05 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VFV NLP + ++ L+ +F + G + C VA+ S+G+GFVQF A AIQ Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSC-KVATLEDGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 383 NGFAVAGRKIRV 418 N VA ++I V Sbjct: 173 NSTIVADKEIYV 184 Score = 42.4 bits (98), Expect = 8e-04 Identities = 25/88 (28%), Positives = 47/88 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S ++V N+ +L FS+ G + ++ + + SKGFGFV F+T ++A A++ Sbjct: 304 SNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGK-SKGFGFVCFSTPEEAIDAVK 362 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQ 460 +G G+ + V +A ++ K +LQ Sbjct: 363 TFHGQMFHGKPLYVAIAQKKEDRKMQLQ 390 Score = 35.4 bits (80), Expect = 0.092 Identities = 23/82 (28%), Positives = 41/82 (50%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L F+E + + S S +G+ F + QDA AI+ Sbjct: 24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIE 83 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 +KN + G+ IRV ++ RAP Sbjct: 84 KKNNSLLNGKMIRVMWSV-RAP 104
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/77 (29%), Positives = 40/77 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + + V+ LP +L +F GP+ C ++ + S G+ FV FA+ DA+ AI+ Sbjct: 85 TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIK 144 Query: 377 QKNGFAVAGRKIRVKLA 427 NG V ++++V A Sbjct: 145 SLNGVTVRNKRLKVSYA 161
>MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing protein 1| Length = 769 Score = 46.2 bits (108), Expect = 5e-05 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK------GSETSKGFGFVQFATVQD 358 ST+F+ L +T + L+TV S + P V K G + S G+GFV F T + Sbjct: 535 STLFLKGLNFTTTTPHLQTVLSHI-PGFSFARVQMKPDPKRPGEKLSMGYGFVGFKTKEA 593 Query: 359 AERAIQQKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 A +A++ GF + G+ + VK A QR +R KK Sbjct: 594 ATKALKALEGFEIDGKSLEVKFA-QRGAEDDRETKK 628 Score = 38.1 bits (87), Expect = 0.014 Identities = 23/76 (30%), Positives = 35/76 (46%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S S +FV NL + S L + FS G + C + S+ + G F+QF +DA A Sbjct: 219 STSRLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGTAFLQFHNAEDALAA 278 Query: 371 IQQKNGFAVAGRKIRV 418 + + GR + V Sbjct: 279 YKALDKTIFQGRLLHV 294
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + V NLP+ D+ +FS G ++ V K ++++GF FV+F +AE A+ Q Sbjct: 714 IIVKNLPFEATRKDVFELFSSFGQLKSV-RVPKKFDKSARGFAFVEFLLPSEAENAMDQL 772 Query: 383 NGFAVAGRKIRVKLAIQRA-PLKERLQK 463 G + GR++ ++ A Q + ++E++ K Sbjct: 773 QGVHLLGRRLVMQYAEQESDDVEEQISK 800
>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1| Length = 833 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASK-----GSETSKGFGFVQFATVQDA 361 +T++V NL ++ K + + VF + + A G S GFGFV+F A Sbjct: 619 ATIYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASA 678 Query: 362 ERAIQQKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 A+ NGF + G K+ +KL+ Q ++K+ Sbjct: 679 VAAMHAMNGFVLDGHKLEIKLSHQGVDAAAEVRKQ 713 Score = 33.5 bits (75), Expect = 0.35 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFM---VASKGSETSKGFGFVQFATVQDAER 367 S + + N+P Y L T + + VA S+ F F+ F +DA++ Sbjct: 2 SRIIIKNIPRYYDKEKLSTYLKSLPQLDAEITDVSVAKTKEGVSRRFAFIGFKNEEDADK 61 Query: 368 AIQQKNGFAVAGRKIRVKLAIQRAPLKERLQ 460 AI+ N V +I V A+ E+L+ Sbjct: 62 AIRYLNKSYVETSRIEVHRALDYRSANEKLR 92
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/75 (33%), Positives = 39/75 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +T V+NLP +L +F ++G V R F+ K + KGF FV F + DA RAI Sbjct: 176 NTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235 Query: 377 QKNGFAVAGRKIRVK 421 + N + ++V+ Sbjct: 236 ELNDIRMYHMVLKVE 250
>NUCL_XENLA (P20397) Nucleolin (Protein C23)| Length = 650 Score = 46.2 bits (108), Expect = 5e-05 Identities = 21/73 (28%), Positives = 41/73 (56%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV N+PY+ +L+ +F +R + + ++KG +V+F+ +A +A+++ Sbjct: 325 TLFVKNIPYSTTVEELQEIFENAKDIR----IPTGKDGSNKGIAYVEFSNEDEANKALEE 380 Query: 380 KNGFAVAGRKIRV 418 K G + GR I V Sbjct: 381 KQGAEIEGRSIFV 393 Score = 41.6 bits (96), Expect = 0.001 Identities = 21/73 (28%), Positives = 38/73 (52%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V+NL Y+ L VF + +R + +KGF F++F++ +DA+ A+ N Sbjct: 418 VNNLSYSATEDSLREVFEKATSIR-----IPQNQGRAKGFAFIEFSSAEDAKDAMDSCNN 472 Query: 389 FAVAGRKIRVKLA 427 + GR IR++ + Sbjct: 473 TEIEGRSIRLEFS 485 Score = 36.6 bits (83), Expect = 0.041 Identities = 23/76 (30%), Positives = 35/76 (46%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F R +V + + SKGFGFV F+T +DA+ A + Sbjct: 503 TLFVRGLSEDTTEETLKEAFDGSVNAR---IVTDRDTGASKGFGFVDFSTAEDAKAAKEA 559 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 560 MEDGEIDGNKVTLDFA 575
>HNRPC_HUMAN (P07910) Heterogeneous nuclear ribonucleoproteins C1/C2 (hnRNP C1 /| hnRNP C2) Length = 306 Score = 46.2 bits (108), Expect = 5e-05 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +2 Query: 197 STVFVSNL-PYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 S VF+ NL K SD+E +FS+ G + C KGF FVQ+ ++A A+ Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIVGC--------SVHKGFAFVQYVNERNARAAV 67 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 ++G +AG+ + + LA + + + KR+ + Sbjct: 68 AGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAA 102
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +2 Query: 254 VFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAI- 430 +F++ GP+ R MV ++ S+GF F+ F + DA A +G V GR+IRV +I Sbjct: 116 LFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSIT 175 Query: 431 QRA 439 QRA Sbjct: 176 QRA 178
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 45.8 bits (107), Expect = 7e-05 Identities = 27/90 (30%), Positives = 44/90 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + L FS G + C VA +KG+GFV F +V+ A AI+ Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSC-KVAVDELGNAKGYGFVHFDSVESANAAIEHV 228 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 NG + +K+ V + R + +++ +A Sbjct: 229 NGMLLNDKKVYVGHHVSRRERQSKVEALKA 258 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 4/92 (4%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL L+ FS G + ++ + + SKGFGFV + T ++A +A+ + Sbjct: 366 LFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGK-SKGFGFVCYTTPEEANKAVTEM 424 Query: 383 NGFAVAGRKIRVKLA----IQRAPLKERLQKK 466 N +AG+ + V LA ++R+ L+ ++Q + Sbjct: 425 NQRMLAGKPLYVALAQRKEVRRSQLEAQIQAR 456 Score = 42.7 bits (99), Expect = 6e-04 Identities = 22/90 (24%), Positives = 47/90 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ NL + +F + G + +V + ++ +GFGFV +A + A++A+ Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVD 319 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + N G+K+ V A ++ +E L+K+ Sbjct: 320 ELNDKEYKGKKLYVGRAQKKHEREEELRKR 349
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 45.8 bits (107), Expect = 7e-05 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + V NLP+ D+ +F+ G ++ V K ++++GF FV+F ++AE A+ Q Sbjct: 740 IIVKNLPFEATRKDVFELFNSFGQLKSV-RVPKKFDKSARGFAFVEFVLPKEAENAMDQL 798 Query: 383 NGFAVAGRKIRVKLAIQRAPLK----ERLQKK 466 G + GR++ ++ A Q A ER+ KK Sbjct: 799 QGVHLLGRRLVMQPAEQEAANAEEELERMTKK 830 Score = 39.7 bits (91), Expect = 0.005 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 5/94 (5%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSE-----VGPVRRCFMVASKGSETSKGFGFVQFATVQDAE 364 ++F+ NL + S L F V V+ K S GFGFV+F T + A Sbjct: 641 SIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQAT 700 Query: 365 RAIQQKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 I +G + G KI++KL+ ++ + +KK Sbjct: 701 AVISAMDGTVIDGHKIQLKLSHRQGNAGSQEKKK 734
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 45.8 bits (107), Expect = 7e-05 Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRC-FMVASKGSETSKGFGFVQFATVQDAERAI 373 S +++ NL + L+ +FSE G V C M+ S+G S+GFGFV ++ ++A A+ Sbjct: 328 SNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQG--LSRGFGFVAYSNPEEALLAM 385 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKERLQ 460 ++ NG + + + V LA ++ + LQ Sbjct: 386 KEMNGKMIGRKPLYVALAQRKEERQAHLQ 414 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/90 (26%), Positives = 48/90 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V+V NLP +L+ F + G + ++ + S S+ FGFV F + + A A++ Sbjct: 225 TNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVE 283 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG ++ + V A +++ +E L++K Sbjct: 284 KMNGISLGEDVLYVGRAQKKSDREEELRRK 313 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/80 (31%), Positives = 42/80 (52%) Frame = +2 Query: 188 HSPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAER 367 H S+++V +L + S L +F++V PV V + S G+ +V FA +DA R Sbjct: 42 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHN-LRVCRDLTHRSLGYAYVNFANPEDASR 100 Query: 368 AIQQKNGFAVAGRKIRVKLA 427 A++ N + R IR+ L+ Sbjct: 101 AMESLNYAPIRDRPIRIMLS 120 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/78 (33%), Positives = 40/78 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + + L FS G + C VA SKG+GFVQF + A+ AI + Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSC-KVAMDVVGRSKGYGFVQFEKEETAQAAIDKL 192 Query: 383 NGFAVAGRKIRVKLAIQR 436 NG + +++ V ++R Sbjct: 193 NGMLLNDKQVFVGHFVRR 210
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 45.8 bits (107), Expect = 7e-05 Identities = 27/74 (36%), Positives = 41/74 (55%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV NLP+ L+ FS+ G V + G SKG G V+F + + AE+A + Sbjct: 525 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMENGK--SKGCGTVRFDSPESAEKACRIM 582 Query: 383 NGFAVAGRKIRVKL 424 NG ++GR+I V+L Sbjct: 583 NGIKISGREIDVRL 596 Score = 43.9 bits (102), Expect = 3e-04 Identities = 29/85 (34%), Positives = 44/85 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ST+FV+NL + L+ VFS G V+R + K + S+G G V F +A +AI Sbjct: 233 STIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGK-SRGMGTVTFEQAIEAVQAIS 291 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKE 451 NG + R + VK+ + P +E Sbjct: 292 MFNGQFLFDRPMHVKMDDKSVPHEE 316 Score = 37.4 bits (85), Expect = 0.024 Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSE-VGPVRRCFMVASKGSE-TSKGFGFVQFATVQDAERAIQ 376 VF+SN+PY K ++ + E VG V ++ K +E S+G G V+F + ++A++ Sbjct: 102 VFISNIPYDMKWQAIKDLMREKVGEVT--YVELFKDAEGKSRGCGVVEFKDEEFVKKALE 159 Query: 377 QKNGFAVAGRKIRVK 421 N + ++GR + +K Sbjct: 160 TMNKYDLSGRPLNIK 174
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/72 (34%), Positives = 39/72 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NL + + L FS G + C +V + SKG+ FV F T + A++AI++ Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKM 158 Query: 383 NGFAVAGRKIRV 418 NG + RK+ V Sbjct: 159 NGMLLNDRKVFV 170 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/85 (30%), Positives = 43/85 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +++ NL T L FS G + ++ G SKGFGFV F++ ++A +A+ + Sbjct: 296 LYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGR--SKGFGFVCFSSPEEATKAVTEM 353 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERL 457 NG V + + V LA ++ K L Sbjct: 354 NGRIVGSKPLYVALAQRKEERKAHL 378 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/90 (26%), Positives = 47/90 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V++ N L+ +FS+ G ++ + SKGFGFV + +DA +A++ Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK-SKGFGFVSYEKHEDANKAVE 249 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG ++G+ I V A ++ + L++K Sbjct: 250 EMNGKEISGKIIFVGRAQKKVERQAELKRK 279 Score = 36.6 bits (83), Expect = 0.041 Identities = 24/82 (29%), Positives = 39/82 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 ++++V +L + L FS GPV + + S G+ +V F DAERA+ Sbjct: 11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70 Query: 377 QKNGFAVAGRKIRVKLAIQRAP 442 N + G+ IR+ + QR P Sbjct: 71 TMNFDVIKGKPIRIMWS-QRDP 91
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 45.4 bits (106), Expect = 9e-05 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = +2 Query: 188 HSPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAER 367 H P +F+ L + L FS+ G +R C ++ ++ S+GFGFV FA ++ Sbjct: 18 HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77 Query: 368 AIQQ 379 + Q Sbjct: 78 VLGQ 81 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +FV L D++ F + G V ++ K + +GFGFV F E+ + Sbjct: 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor| 9G8) Length = 238 Score = 45.4 bits (106), Expect = 9e-05 Identities = 25/75 (33%), Positives = 41/75 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NL +LE FS GP+R ++ + GF FV+F +DAE A++ Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWI-----ARNPPGFAFVEFEDPRDAEDAVRGL 67 Query: 383 NGFAVAGRKIRVKLA 427 +G + G ++RV+L+ Sbjct: 68 DGKVICGSRVRVELS 82
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 45.4 bits (106), Expect = 9e-05 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = +2 Query: 188 HSPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAER 367 H P +F+ L + L FS+ G +R C ++ ++ S+GFGFV FA ++ Sbjct: 18 HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77 Query: 368 AIQQ 379 + Q Sbjct: 78 VLGQ 81 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +FV L D++ F + G V ++ K + +GFGFV F E+ + Sbjct: 112 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 45.4 bits (106), Expect = 9e-05 Identities = 27/77 (35%), Positives = 38/77 (49%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + DL+ FS+ G V ++ + S S+GFGFV F + AI++ N Sbjct: 9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 69 GKELDGRVITVNEAQSR 85
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++FV N+ +S DL F GP+ ++ + +GF +VQF V+DAE A+ Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69 Query: 377 QKNGFAVAGRKIRVKLA 427 + + GR+I ++ A Sbjct: 70 NLDRKWICGRQIEIQFA 86
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++FV N+ +S DL F GP+ ++ + +GF +VQF V+DAE A+ Sbjct: 10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69 Query: 377 QKNGFAVAGRKIRVKLA 427 + + GR+I ++ A Sbjct: 70 NLDRKWICGRQIEIQFA 86
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/78 (29%), Positives = 40/78 (51%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P +F+ L LE VF + G + ++ + + S+GF FV F + DA+ A Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66 Query: 374 QQKNGFAVAGRKIRVKLA 427 + NG ++ G+ I+V+ A Sbjct: 67 RDMNGKSLDGKAIKVEQA 84
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + + LE F+ G V ++ + + S+GFGFV F++ Q AI+ N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 71 GKELDGRNITVNQAQSR 87
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 45.1 bits (105), Expect = 1e-04 Identities = 25/75 (33%), Positives = 36/75 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV LPY + L F G + ++ + + S+G+GFV A AERA + Sbjct: 13 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 72 Query: 383 NGFAVAGRKIRVKLA 427 N + GRK V LA Sbjct: 73 NPI-IDGRKANVNLA 86
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 45.1 bits (105), Expect = 1e-04 Identities = 23/78 (29%), Positives = 41/78 (52%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P +F+ L L+ VF + GP+ ++ + S+ S+GF F+ F DA+ A Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSK-SRGFAFITFENPADAKNAA 65 Query: 374 QQKNGFAVAGRKIRVKLA 427 + NG ++ G+ I+V+ A Sbjct: 66 KDMNGKSLHGKAIKVEQA 83
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+ L+ +F E GP ++ S SKGFGFV++ T + A++A+ Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVL 257 Query: 377 QKNGFAVAGRKI---RVKLAIQR-APLKERLQKKR 469 +G ++ G+ + R + I+R A L+ R ++ R Sbjct: 258 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR 292 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +FS G + C +V SKG+ +V F ++ A RAI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG--SKGYAYVHFDSLAAANRAIWHM 165 Query: 383 NGFAVAGRKIRV 418 NG + R++ V Sbjct: 166 NGVRLNNRQVYV 177 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V +L L F GP+R + + + G+G+V F DAE A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 377 QKNGFAVAGRKIRV 418 N + G+ R+ Sbjct: 78 TMNFDLINGKPFRL 91
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+ L+ +F E GP ++ S SKGFGFV++ T + A++A+ Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVL 257 Query: 377 QKNGFAVAGRKI---RVKLAIQR-APLKERLQKKR 469 +G ++ G+ + R + I+R A L+ R ++ R Sbjct: 258 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR 292 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +FS G + C +V SKG+ +V F ++ A RAI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG--SKGYAYVHFDSLAAANRAIWHM 165 Query: 383 NGFAVAGRKIRV 418 NG + R++ V Sbjct: 166 NGVRLNNRQVYV 177 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V +L L F GP+R + + + G+G+V F DAE A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 377 QKNGFAVAGRKIRV 418 N + G+ R+ Sbjct: 78 TMNFDLINGKPFRL 91
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+ L+ +F E GP ++ S SKGFGFV++ T + A++A+ Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVL 257 Query: 377 QKNGFAVAGRKI---RVKLAIQR-APLKERLQKKR 469 +G ++ G+ + R + I+R A L+ R ++ R Sbjct: 258 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR 292 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +FS G + C +V SKG+ +V F ++ A RAI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG--SKGYAYVHFDSLAAANRAIWHM 165 Query: 383 NGFAVAGRKIRV 418 NG + R++ V Sbjct: 166 NGVRLNNRQVYV 177 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V +L L F GP+R + + + G+G+V F DAE A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 377 QKNGFAVAGRKIRV 418 N + G+ R+ Sbjct: 78 TMNFDLINGKPFRL 91
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+ L+ +F E GP ++ S SKGFGFV++ T + A++A+ Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVL 257 Query: 377 QKNGFAVAGRKI---RVKLAIQR-APLKERLQKKR 469 +G ++ G+ + R + I+R A L+ R ++ R Sbjct: 258 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR 292 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +FS G + C +V SKG+ +V F ++ A RAI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG--SKGYAYVHFDSLAAANRAIWHM 165 Query: 383 NGFAVAGRKIRV 418 NG + R++ V Sbjct: 166 NGVRLNNRQVYV 177 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V +L L F GP+R + + + G+G+V F DAE A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 377 QKNGFAVAGRKIRV 418 N + G+ R+ Sbjct: 78 TMNFDLINGKPFRL 91
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+ L+ +F E GP ++ S SKGFGFV++ T + A++A+ Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVL 257 Query: 377 QKNGFAVAGRKI---RVKLAIQR-APLKERLQKKR 469 +G ++ G+ + R + I+R A L+ R ++ R Sbjct: 258 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR 292 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +FS G + C +V SKG+ +V F ++ A RAI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG--SKGYAYVHFDSLAAANRAIWHM 165 Query: 383 NGFAVAGRKIRV 418 NG + R++ V Sbjct: 166 NGVRLNNRQVYV 177 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V +L L F GP+R + + + G+G+V F DAE A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 377 QKNGFAVAGRKIRV 418 N + G+ R+ Sbjct: 78 TMNFDLINGKPFRL 91
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 44.7 bits (104), Expect = 2e-04 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + VFV N+ L+ +F E GP ++ S SKGFGFV++ T + A++A+ Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVL 257 Query: 377 QKNGFAVAGRKI---RVKLAIQR-APLKERLQKKR 469 +G ++ G+ + R + I+R A L+ R ++ R Sbjct: 258 DLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLR 292 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +FS G + C +V SKG+ +V F ++ A RAI Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG--SKGYAYVHFDSLAAANRAIWHM 165 Query: 383 NGFAVAGRKIRV 418 NG + R++ V Sbjct: 166 NGVRLNNRQVYV 177 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + ++V +L L F GP+R + + + G+G+V F DAE A+ Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 77 Query: 377 QKNGFAVAGRKIRV 418 N + G+ R+ Sbjct: 78 TMNFDLINGKPFRL 91
>SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1| Length = 256 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 17 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYGR 73 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 74 DGYDYDGYRLRVE 86
>SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1| Length = 247 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 17 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYGR 73 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 74 DGYDYDGYRLRVE 86
>SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1| Length = 247 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 17 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYGR 73 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 74 DGYDYDGYRLRVE 86
>SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing| factor SF2, P33 subunit) (Alternative splicing factor ASF-1) Length = 247 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 17 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYGR 73 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 74 DGYDYDGYRLRVE 86
>SF1L1_BRARE (Q7SXP4) Splicing factor, arginine/serine-rich 1-like protein 1| Length = 245 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYAR 73 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 74 DGYDYDGYRLRVE 86
>SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1| Length = 267 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 18 IYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYGR 74 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 75 DGYDYDGYRLRVE 87
>NUCL_MOUSE (P09405) Nucleolin (Protein C23)| Length = 706 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/75 (32%), Positives = 40/75 (53%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ +SNL Y+ LE VF + ++ V KG+ F++FA+ +DA+ A+ Sbjct: 487 TLVLSNLSYSATKETLEEVFEKATFIK----VPQNPHGKPKGYAFIEFASFEDAKEALNS 542 Query: 380 KNGFAVAGRKIRVKL 424 N + GR IR++L Sbjct: 543 CNKMEIEGRTIRLEL 557 Score = 43.1 bits (100), Expect = 4e-04 Identities = 23/88 (26%), Positives = 45/88 (51%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+ NL + +L+ VF + +R +V+ G SKG +++F + DAE+ +++ Sbjct: 395 TLLAKNLSFNITEDELKEVFEDAMEIR---LVSQDGK--SKGIAYIEFKSEADAEKNLEE 449 Query: 380 KNGFAVAGRKIRVKLAIQRAPLKERLQK 463 K G + GR + + ++ +ER K Sbjct: 450 KQGAEIDGRSVSLYYTGEKGQRQERTGK 477 Score = 33.5 bits (75), Expect = 0.35 Identities = 24/76 (31%), Positives = 37/76 (48%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV L L+ F G VR +V + + +SKGFGFV F + +DA+ A + Sbjct: 569 TLFVKGLSEDTTEETLKESFE--GSVR-ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEA 625 Query: 380 KNGFAVAGRKIRVKLA 427 + G K+ + A Sbjct: 626 MEDGEIDGNKVTLDWA 641
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/77 (29%), Positives = 42/77 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + V NLP+ D+ +FS G ++ V K ++++GF FV+F ++AE A+ Q Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSV-RVPKKFDKSARGFAFVEFLLPKEAENAMDQL 812 Query: 383 NGFAVAGRKIRVKLAIQ 433 G + GR++ ++ Q Sbjct: 813 QGVHLLGRRLVMEFVEQ 829
>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +FV L DLE +FS GP+R C ++ + S + F++F +D E+A Sbjct: 240 NVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFF 299 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLK 448 + + + R+I V + A +K Sbjct: 300 KMDNVLIDDRRIHVDFSQSVAKVK 323
>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/84 (27%), Positives = 41/84 (48%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +FV L DLE +FS GP+R C ++ + S + F++F +D E+A Sbjct: 240 NVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFF 299 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLK 448 + + + R+I V + A +K Sbjct: 300 KMDNVLIDDRRIHVDFSQSVAKVK 323
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 44.3 bits (103), Expect = 2e-04 Identities = 28/73 (38%), Positives = 38/73 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF+ NLPY+ L+ +F E G V R V + S+GFG V + T + RAI Sbjct: 221 VFIINLPYSMNWQSLKDMFKECGHVLRAD-VELDFNGFSRGFGSVIYPTEDEMIRAIDTF 279 Query: 383 NGFAVAGRKIRVK 421 NG V GR + V+ Sbjct: 280 NGMEVEGRVLEVR 292 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +++FV NL + DL+ +F VG V ++ SKG +G G V+F + + AI Sbjct: 122 NSIFVRNLTFDCTPEDLKELFGTVGEVVEADIITSKGHH--RGMGTVEFTKNESVQDAIS 179 Query: 377 QKNGFAVAGRKIRVK 421 + +G RK+ V+ Sbjct: 180 KFDGALFMDRKLMVR 194 Score = 37.7 bits (86), Expect = 0.019 Identities = 18/75 (24%), Positives = 38/75 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++ SNLP++ SDL +F +G + + + + + G V++ + DA+ IQ+ Sbjct: 351 IYCSNLPFSTARSDLFDLFGPIGKINNAELKPQENGQPT-GVAVVEYENLVDADFCIQKL 409 Query: 383 NGFAVAGRKIRVKLA 427 N + G +++ A Sbjct: 410 NNYNYGGCSLQISYA 424
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 44.3 bits (103), Expect = 2e-04 Identities = 27/77 (35%), Positives = 38/77 (49%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + LET FS+ G V ++ + + S+GFGFV F + + AI+ N Sbjct: 11 FVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 71 GQDLDGRSITVNEAQSR 87
>YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 in chromosome I| Length = 576 Score = 44.3 bits (103), Expect = 2e-04 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 5/98 (5%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+ + + N+P++ K L VF+ + R + +G F F + ++A+ + Sbjct: 231 PTAIVIKNIPFSLKKEVLFKVFTALDIPRPYAFNYHFDNGVFRGLAFANFHSPEEAKTVV 290 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPL-KERL----QKKRA 472 Q NG+ + GR++RV+ Q P +ER+ Q+KRA Sbjct: 291 QVLNGYEITGRRLRVEWKRQLPPAERERVERGKQEKRA 328
>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of| deformed) (52-kDa bracketing protein) (B52 protein) Length = 375 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/77 (32%), Positives = 38/77 (49%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S V+V LPY + DLE F G R + G+GFV+F +DA+ A+ Sbjct: 3 SRVYVGGLPYGVRERDLERFFKGYGRTRDILI--------KNGYGFVEFEDYRDADDAVY 54 Query: 377 QKNGFAVAGRKIRVKLA 427 + NG + G ++ V+ A Sbjct: 55 ELNGKELLGERVVVEPA 71
>SFRS1_BRARE (Q6NYA0) Splicing factor, arginine/serine-rich 1| Length = 245 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/73 (31%), Positives = 41/73 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP ++ D+E VF + G +R + +G F FV+F +DAE A+ + Sbjct: 17 IYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPP---FAFVEFEDPRDAEDAVYGR 73 Query: 383 NGFAVAGRKIRVK 421 +G+ G ++RV+ Sbjct: 74 DGYDYDGYRLRVE 86
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/77 (33%), Positives = 39/77 (50%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + ++LE FS+ G V ++ + + S+GFGFV F + + AI + N Sbjct: 9 FVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMN 68 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 69 GKELDGRTITVNEAQSR 85
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 44.3 bits (103), Expect = 2e-04 Identities = 28/89 (31%), Positives = 42/89 (47%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L +S DLE +FS G + C ++ K + S + F++F DAERA + Sbjct: 264 LFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKM 323 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 V R+I V + + L KKR Sbjct: 324 QNVLVDDRRIWVDFSQSVSRLHGDWVKKR 352
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/79 (29%), Positives = 45/79 (56%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + V NLP+ D+ +F+ G ++ V K ++++GF FV+F ++AE A+ Q Sbjct: 765 IIVKNLPFEATRKDVFELFNSFGQLKSV-RVPKKFDKSARGFAFVEFLLPKEAENAMDQL 823 Query: 383 NGFAVAGRKIRVKLAIQRA 439 +G + GR++ ++ A + A Sbjct: 824 HGVHLLGRRLVMQYAEEDA 842 Score = 40.8 bits (94), Expect = 0.002 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVAS---------KGSETSKGFGFVQFATV 352 ++F+ NL ++ + +L F V F+VA +G S GFGFV+F T Sbjct: 664 SIFIKNLNFSTTNQNLTDRFK----VFTGFVVAQVKTKPDPKHQGKTLSMGFGFVEFRTK 719 Query: 353 QDAERAIQQKNGFAVAGRKIRVKLAIQRA 439 + A I +G + G KI++KL+ ++A Sbjct: 720 EQANAVIAAMDGTVIDGHKIQLKLSHRQA 748
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/79 (30%), Positives = 39/79 (49%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T+FV ++P L FS P++ +V ++ S+GFGFV FA D + A+ + Sbjct: 27 TLFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKDT-NKRSRGFGFVSFAVEDDTKEALAK 85 Query: 380 KNGFAVAGRKIRVKLAIQR 436 G +RV +A +R Sbjct: 86 ARKTKFNGHILRVDIAKRR 104 Score = 34.7 bits (78), Expect = 0.16 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQF 343 +VFV N+PY L FS+ G V+ V K + +KG FV F Sbjct: 291 SVFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAF 338 Score = 31.6 bits (70), Expect = 1.3 Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSS-DLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 + + N+P++ + L+ +F G V + + + GF FV + + A++ Sbjct: 149 LIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLC-GFAFVTMKKISNCRIALEN 207 Query: 380 KNGFAVAGRKIRVKLAIQR 436 + GRK+ V A+Q+ Sbjct: 208 TKDLKIDGRKVAVDFAVQK 226
>RBP1_DROME (Q02427) RNA-binding protein 1| Length = 144 Score = 43.9 bits (102), Expect = 3e-04 Identities = 25/84 (29%), Positives = 45/84 (53%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NL + ++E F++ GP+R ++ + GF FV+F +DAE A + Sbjct: 13 VYVGNLGSSASKHEIEGAFAKYGPLRNVWV-----ARNPPGFAFVEFEDRRDAEDATRAL 67 Query: 383 NGFAVAGRKIRVKLAIQRAPLKER 454 +G G +IRV+++ R+ + R Sbjct: 68 DGTRCCGTRIRVEMSSGRSRDRRR 91
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/78 (28%), Positives = 41/78 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ L + L + F + G + C ++ ++ S+GFGFV +ATV++ + A+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 383 NGFAVAGRKIRVKLAIQR 436 V GR + K A+ R Sbjct: 75 -PHKVDGRVVEPKRAVSR 91 Score = 32.0 bits (71), Expect = 1.0 Identities = 19/89 (21%), Positives = 36/89 (40%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV + + L F + G + ++ +GS +GF FV F ++ + QK Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKR 469 V G V+ A+ + + +R Sbjct: 166 Y-HTVNGHNCEVRKALSKQEMASASSSQR 193
>IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein homolog) Length = 247 Score = 43.9 bits (102), Expect = 3e-04 Identities = 23/78 (29%), Positives = 42/78 (53%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P T +V NLP+ D++ +F ++ +R +V K ++ KGF +V+F V + A+ Sbjct: 40 PYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEAL 98 Query: 374 QQKNGFAVAGRKIRVKLA 427 +G + R +RV +A Sbjct: 99 TY-DGALLGDRSLRVDIA 115
>IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H (eIF-4H)| (Williams-Beuren syndrome chromosome region 1 protein) Length = 247 Score = 43.9 bits (102), Expect = 3e-04 Identities = 23/78 (29%), Positives = 42/78 (53%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P T +V NLP+ D++ +F ++ +R +V K ++ KGF +V+F V + A+ Sbjct: 40 PYTAYVGNLPFNTVQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEAL 98 Query: 374 QQKNGFAVAGRKIRVKLA 427 +G + R +RV +A Sbjct: 99 TY-DGALLGDRSLRVDIA 115
>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 459 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/85 (25%), Positives = 41/85 (48%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +FV L + DL+ +FS GP+ C ++ K + S + F++F +D E+A Sbjct: 248 NVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYF 307 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKE 451 + G + +I V + + L E Sbjct: 308 KMQGVLIDDHRIHVDFSQSVSKLSE 332
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/78 (33%), Positives = 41/78 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L FS G + C VA + SKG+GFVQF + A+ AI + Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSC-KVAMDVTGRSKGYGFVQFEKEESAQAAIDKL 196 Query: 383 NGFAVAGRKIRVKLAIQR 436 NG + +++ V I+R Sbjct: 197 NGMLMNDKQVFVGHFIRR 214 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/90 (26%), Positives = 46/90 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + V+V NLP +L F + G + ++ + S S+ FGFV F + A A++ Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVE 287 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + NG ++ + V A +++ +E L++K Sbjct: 288 KMNGISLGDDVLYVGRAQKKSEREEELRRK 317 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/88 (26%), Positives = 47/88 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +++ NL + L+ +FSE G V ++ + S+GFGFV ++ ++A RA+ Sbjct: 332 ANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQG-MSRGFGFVAYSNPEEALRALS 390 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKERLQ 460 + NG + + + + LA ++ + LQ Sbjct: 391 EMNGKMIGRKPLYIALAQRKEDRRAHLQ 418
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/78 (28%), Positives = 41/78 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ L + L + F + G + C ++ ++ S+GFGFV +ATV++ + A+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 383 NGFAVAGRKIRVKLAIQR 436 V GR + K A+ R Sbjct: 75 -PHKVDGRVVEPKRAVSR 91 Score = 31.2 bits (69), Expect = 1.7 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV + + L F + G + ++ +GS +GF FV F ++ + QK Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165 Query: 383 ----NGFAVAGRKIRVKLAIQRAPLKER 454 NG RK K + A +R Sbjct: 166 YHTVNGHNCEVRKALCKQEMASASSSQR 193
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/78 (28%), Positives = 41/78 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ L + L + F + G + C ++ ++ S+GFGFV +ATV++ + A+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 383 NGFAVAGRKIRVKLAIQR 436 V GR + K A+ R Sbjct: 75 -PHKVDGRVVEPKRAVSR 91 Score = 32.3 bits (72), Expect = 0.78 Identities = 20/92 (21%), Positives = 37/92 (40%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV + + L F + G + ++ +GS +GF FV F ++ + QK Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 V G V+ A+ + + +R S Sbjct: 166 Y-HTVNGHNCEVRKALSKQEMASASSSQRGRS 196
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + + LE F+ G + ++ + + S+GFGFV F++ AI+ N Sbjct: 11 FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMN 70 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 71 GKELDGRNITVNQAQSR 87
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/78 (28%), Positives = 41/78 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ L + L + F + G + C ++ ++ S+GFGFV +ATV++ + A+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 74 Query: 383 NGFAVAGRKIRVKLAIQR 436 V GR + K A+ R Sbjct: 75 -PHKVDGRVVEPKRAVSR 91 Score = 32.3 bits (72), Expect = 0.78 Identities = 20/92 (21%), Positives = 37/92 (40%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV + + L F + G + ++ +GS +GF FV F ++ + QK Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 V G V+ A+ + + +R S Sbjct: 166 Y-HTVNGHNCEVRKALSKQEMASASSSQRGRS 196
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P +F+ L LE VF + G + ++ + + S+GF FV F + DA+ Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVA 66 Query: 374 QQKNGFAVAGRKIRVKLA 427 + NG ++ G+ I+V+ A Sbjct: 67 RDMNGKSLDGKAIKVEQA 84
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/75 (32%), Positives = 36/75 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV LPY + L F G + ++ + + S+G+GFV A A+RA + Sbjct: 34 IFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDP 93 Query: 383 NGFAVAGRKIRVKLA 427 N + GRK V LA Sbjct: 94 NPI-IDGRKANVNLA 107
>NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) Length = 156 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T++V NL + + +FS+ G +++ M K +T+ GF FV++ + DAE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 380 KNGFAVAGRKIR 415 NG + R IR Sbjct: 101 INGTRLDDRIIR 112
>NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1) (Cell proliferation-inducing gene 55 protein) Length = 156 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T++V NL + + +FS+ G +++ M K +T+ GF FV++ + DAE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 380 KNGFAVAGRKIR 415 NG + R IR Sbjct: 101 INGTRLDDRIIR 112
>NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2| Length = 156 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T++V NL + + +FS+ G +++ M K +T+ GF FV++ + DAE A++ Sbjct: 41 TLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 Query: 380 KNGFAVAGRKIR 415 NG + R IR Sbjct: 101 INGTRLDDRIIR 112
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 43.5 bits (101), Expect = 3e-04 Identities = 21/73 (28%), Positives = 41/73 (56%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 ++FV N+ +E F + G ++R ++ + + T KG+G+++F + E+A+ Q Sbjct: 65 SIFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL-Q 123 Query: 380 KNGFAVAGRKIRV 418 NG + G+KI V Sbjct: 124 LNGGELKGKKIAV 136
>HNRCL_HUMAN (O60812) Heterogeneous nuclear ribonucleoprotein C-like 1 (hnRNP| core protein C-like 1) Length = 293 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +2 Query: 197 STVFVSNL-PYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 S VF+ NL K SD+E +FS+ G + C KGF FVQ+ ++A A+ Sbjct: 16 SRVFIGNLNTLVVKKSDVEAIFSKYGKIAGC--------SVHKGFAFVQYDKEKNARAAV 67 Query: 374 QQKNGFAVAGRKIRVKLAIQ 433 ++G +A + + + LA + Sbjct: 68 AGEDGRMIASQVVDINLAAE 87
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + LE FS+ G + ++ + + S+GFGFV F + AI+ N Sbjct: 9 FVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMN 68 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 69 GQELDGRNITVNEAQSR 85
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + LET FS+ G + ++ + + S+GFGFV F + + AI+ N Sbjct: 11 FVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMN 70 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 71 GQDLDGRSITVNEAQSR 87
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 43.1 bits (100), Expect = 4e-04 Identities = 25/77 (32%), Positives = 40/77 (51%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +TV+V L L +F + GPV M + + +G+GFV+F + +DA+ AI+ Sbjct: 13 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIK 72 Query: 377 QKNGFAVAGRKIRVKLA 427 N + G+ IRV A Sbjct: 73 IMNMIKLYGKPIRVNKA 89
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSET-SKGFGFVQFATVQDAERAI 373 + ++VS LP T +LE +F+ G + ++ + G++T +KG GF++F ++A RAI Sbjct: 284 ANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAI 343 Query: 374 QQKNG 388 NG Sbjct: 344 IALNG 348 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSE-------------TSKGFGFV 337 + + V+ LP T ++ ++FS VG + ++ K S G+GFV Sbjct: 185 TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFV 244 Query: 338 QFATVQDAERAIQQKNGFAVAGRKIRVKLA 427 + QDAE+A+ NG + + I+V A Sbjct: 245 NYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 274 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/79 (26%), Positives = 37/79 (46%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +F G V+ +V + KG+GFV +A AI+ Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + R ++V +A Sbjct: 500 NGYTMGNRVLQVSFKTNKA 518
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/60 (33%), Positives = 34/60 (56%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S +FV NL + +DL+ F +VG +RR ++ + + KGFGFV F + +A++ Sbjct: 228 SILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P +F+ L LE VF + G + ++ + + S+GF FV + DA+ A Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAA 66 Query: 374 QQKNGFAVAGRKIRVKLA 427 + NG ++ G+ I+V+ A Sbjct: 67 RDMNGKSLDGKAIKVEQA 84
>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing| factor SRP20) (X16 protein) Length = 164 Score = 43.1 bits (100), Expect = 4e-04 Identities = 23/75 (30%), Positives = 41/75 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NL ++LE F GP+R ++ + GF FV+F +DA A+++ Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWV-----ARNPPGFAFVEFEDPRDAADAVREL 66 Query: 383 NGFAVAGRKIRVKLA 427 +G + G ++RV+L+ Sbjct: 67 DGRTLCGCRVRVELS 81
>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing| factor SRP20) Length = 164 Score = 43.1 bits (100), Expect = 4e-04 Identities = 23/75 (30%), Positives = 41/75 (54%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NL ++LE F GP+R ++ + GF FV+F +DA A+++ Sbjct: 12 VYVGNLGNNGNKTELERAFGYYGPLRSVWV-----ARNPPGFAFVEFEDPRDAADAVREL 66 Query: 383 NGFAVAGRKIRVKLA 427 +G + G ++RV+L+ Sbjct: 67 DGRTLCGCRVRVELS 81
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSET-SKGFGFVQFATVQDAERAI 373 + ++VS LP T +LE +F+ G + ++ + G++T +KG GF++F ++A RAI Sbjct: 248 ANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAI 307 Query: 374 QQKNG 388 NG Sbjct: 308 IALNG 312 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 13/90 (14%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSE-------------TSKGFGFV 337 + + V+ LP T ++ ++FS VG + ++ K S G+GFV Sbjct: 149 TNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFV 208 Query: 338 QFATVQDAERAIQQKNGFAVAGRKIRVKLA 427 + QDAE+A+ NG + + I+V A Sbjct: 209 NYVRPQDAEQAVNVLNGLRLQNKTIKVSFA 238 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/79 (26%), Positives = 37/79 (46%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL + + L +F G V+ +V + KG+GFV +A AI+ Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 383 NGFAVAGRKIRVKLAIQRA 439 NG+ + R ++V +A Sbjct: 464 NGYTMGNRVLQVSFKTNKA 482
>SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9| Length = 222 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/73 (32%), Positives = 38/73 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP + DLE +F + G +R + K F FV+F +DAE AI + Sbjct: 17 IYVGNLPSDVREKDLEDLFYKYGRIRE---IELKNRHGLVPFAFVRFEDPRDAEDAIYGR 73 Query: 383 NGFAVAGRKIRVK 421 NG+ ++RV+ Sbjct: 74 NGYDYGQCRLRVE 86
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 42.7 bits (99), Expect = 6e-04 Identities = 20/77 (25%), Positives = 41/77 (53%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S + + NLP+ D++ +F G ++ V K + S+GF F ++ + ++AE A+ Sbjct: 703 SKILIKNLPFEATKKDVQKLFGAFGSLKTV-RVPKKFNSESRGFAFAEYVSAKEAEHAMS 761 Query: 377 QKNGFAVAGRKIRVKLA 427 G + GR++ ++ A Sbjct: 762 ALQGTHLLGRRLVLQYA 778 Score = 40.8 bits (94), Expect = 0.002 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 9/101 (8%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVA---------SKGSETSKGFGFVQFAT 349 ++VFV NL + S L F + F+VA +KG S GFGFV+F++ Sbjct: 605 TSVFVKNLNFKTTSRVLTDAFKALDG----FLVAQVKMKPDSKNKGKFLSMGFGFVEFSS 660 Query: 350 VQDAERAIQQKNGFAVAGRKIRVKLAIQRAPLKERLQKKRA 472 + AE A + +G + G K+++K++ R +E + K+A Sbjct: 661 KEAAEIAQKAMDGHVLDGHKLQLKIS-NRGQDEETTETKKA 700 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL YT K D +FS+ G + + + + KGF VQF ++A A + + Sbjct: 303 LFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEAQ 362 Query: 383 NGFAVAGRKIRV 418 +G GR + + Sbjct: 363 DGKIFQGRLLHI 374
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 42.7 bits (99), Expect = 6e-04 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = +2 Query: 254 VFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAI- 430 +F++ GP+ R MV + S+GF F+ F + DA A G V GR+IRV +I Sbjct: 124 LFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGMEVDGRRIRVDYSIT 183 Query: 431 QRA 439 QRA Sbjct: 184 QRA 186
>SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9| Length = 221 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/73 (32%), Positives = 38/73 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP + DLE +F + G +R + K F FV+F +DAE AI + Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIRE---IELKNRHGLVPFAFVRFEDPRDAEDAIYGR 72 Query: 383 NGFAVAGRKIRVK 421 NG+ ++RV+ Sbjct: 73 NGYDYGQCRLRVE 85
>SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pre-mRNA-splicing| factor SRp30C) Length = 221 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/73 (32%), Positives = 38/73 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 ++V NLP + DLE +F + G +R + K F FV+F +DAE AI + Sbjct: 16 IYVGNLPTDVREKDLEDLFYKYGRIRE---IELKNRHGLVPFAFVRFEDPRDAEDAIYGR 72 Query: 383 NGFAVAGRKIRVK 421 NG+ ++RV+ Sbjct: 73 NGYDYGQCRLRVE 85
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 42.7 bits (99), Expect = 6e-04 Identities = 22/78 (28%), Positives = 40/78 (51%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ L + L + F + G + C ++ ++ S+GFGFV +ATV+ + A+ + Sbjct: 15 LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNAR 74 Query: 383 NGFAVAGRKIRVKLAIQR 436 V GR + K A+ R Sbjct: 75 -PHKVDGRVVEPKRAVSR 91 Score = 32.3 bits (72), Expect = 0.78 Identities = 20/92 (21%), Positives = 37/92 (40%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV + + L F + G + ++ +GS +GF FV F ++ + QK Sbjct: 106 IFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQK 165 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRACS 478 V G V+ A+ + + +R S Sbjct: 166 Y-HTVNGHNCEVRKALSKQEMASASSSQRGRS 196
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 42.4 bits (98), Expect = 8e-04 Identities = 18/71 (25%), Positives = 38/71 (53%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V++ ++PY + + S VGPV M+ + SKG+ F++F ++ + A++ Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 383 NGFAVAGRKIR 415 NG+ + R ++ Sbjct: 80 NGYQLGSRFLK 90
>RAVR2_HUMAN (Q9HCJ3) Protein raver-2| Length = 691 Score = 42.4 bits (98), Expect = 8e-04 Identities = 18/54 (33%), Positives = 33/54 (61%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 ++N+P ++ S + E + G + RCF+V S+ + SKG+GFV++ A +A Sbjct: 146 ITNVPISFTSEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKA 199
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 42.4 bits (98), Expect = 8e-04 Identities = 26/104 (25%), Positives = 49/104 (47%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +++ NL D+ TVFSE G + + + S+GF ++++ + A+ Sbjct: 33 IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNL 92 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKKRACS**LRAKMKRDIL 514 NGF + GR +++ R K LQK ++ ++ RDI+ Sbjct: 93 NGFKIGGRALKIDHTFYRP--KRSLQKYYEA---VKEELDRDIV 131
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 42.4 bits (98), Expect = 8e-04 Identities = 22/85 (25%), Positives = 41/85 (48%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +FV L + DLE +FS G + C ++ K + S + F++F + +D E+A Sbjct: 248 NVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFESQKDCEQAYF 307 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKE 451 + G + +I V + + L E Sbjct: 308 KMQGVLIDDHRIHVDFSQSVSKLSE 332
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 42.4 bits (98), Expect = 8e-04 Identities = 23/66 (34%), Positives = 35/66 (53%) Frame = +2 Query: 239 SDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNGFAVAGRKIRV 418 + L + FS G V ++ + ++ S+GFGFV F+T + AI+ NG + GR I V Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60 Query: 419 KLAIQR 436 A R Sbjct: 61 NEAQSR 66
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 42.4 bits (98), Expect = 8e-04 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV +P+ ++L+ F+ G V M+ + +GFGF+ F Q ++A+ Sbjct: 116 IFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM- 174 Query: 383 NGFAVAGRKIRVKLAIQR 436 + + G+K+ VK A R Sbjct: 175 HFHDIMGKKVEVKRAEPR 192 Score = 37.4 bits (85), Expect = 0.024 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQF 343 +FV L ++ L + FS+ G V C ++ K + S+GFGFV+F Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/77 (33%), Positives = 38/77 (49%) Frame = +2 Query: 206 FVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKN 385 FV L + LET F++ G V ++ + + S+GFGFV F + + AI+ N Sbjct: 11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMN 70 Query: 386 GFAVAGRKIRVKLAIQR 436 G + GR I V A R Sbjct: 71 GQDLDGRSITVNEAQSR 87
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 42.0 bits (97), Expect = 0.001 Identities = 22/87 (25%), Positives = 40/87 (45%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P +FV + + +L +FS+ GP+ ++ K G+GF+ + A I Sbjct: 194 PGNIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCI 253 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKER 454 ++ NG V G + + ++R KER Sbjct: 254 KELNGRTVNGSTLFINYHVER---KER 277 Score = 33.9 bits (76), Expect = 0.27 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 19/87 (21%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSE-------------------TS 319 S ++V ++P ++ DL + G + ++ GS+ +S Sbjct: 540 SNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQSNDSSSDNDLPVGSS 599 Query: 320 KGFGFVQFATVQDAERAIQQKNGFAVA 400 +G+GFV F + DA +AI +G+ V+ Sbjct: 600 RGYGFVSFESPLDAAKAILNTDGYQVS 626 Score = 30.4 bits (67), Expect = 3.0 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 320 KGFGFVQFATVQDAERAIQQKNGFAVAGRKIRVKLAIQ 433 KG+GF++ + A AI+ NGF G ++ V A+Q Sbjct: 381 KGYGFIKLINHEQALAAIETFNGFMWHGNRLVVNKAVQ 418
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/78 (26%), Positives = 38/78 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV +P+ ++L F + G V M+ + +GFGF+ F Q ++A+ Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM- 173 Query: 383 NGFAVAGRKIRVKLAIQR 436 + + G+K+ VK A R Sbjct: 174 HFHDIMGKKVEVKRAEPR 191 Score = 38.5 bits (88), Expect = 0.011 Identities = 25/88 (28%), Positives = 39/88 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L ++ L + FS+ G V C ++ K + S+GFGFV+F + + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGTVLAS 70 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + GR I K R ER + K Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPK 98
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/78 (26%), Positives = 38/78 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV +P+ ++L F + G V M+ + +GFGF+ F Q ++A+ Sbjct: 115 IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM- 173 Query: 383 NGFAVAGRKIRVKLAIQR 436 + + G+K+ VK A R Sbjct: 174 HFHDIMGKKVEVKRAEPR 191 Score = 38.5 bits (88), Expect = 0.011 Identities = 25/88 (28%), Positives = 39/88 (44%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L ++ L + FS+ G V C ++ K + S+GFGFV+F + + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD-PNCVGTVLAS 70 Query: 383 NGFAVAGRKIRVKLAIQRAPLKERLQKK 466 + GR I K R ER + K Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPK 98
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/81 (24%), Positives = 46/81 (56%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+TVFV + +++ + F + G V+ ++ + + SKG+GFV F D ++ + Sbjct: 35 PNTVFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIV 93 Query: 374 QQKNGFAVAGRKIRVKLAIQR 436 + + +V G+++++ AI++ Sbjct: 94 ESQ--ISVHGKRLKLGPAIRK 112
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + DL+ F++ G V C + + S+GFGF+ F E+ + QK Sbjct: 70 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 129 Query: 383 NGFAVAGRKIRVK--LAIQRAPLKE 451 + GR I K +A+++ P+K+ Sbjct: 130 E-HRLDGRVIDPKKAMAMKKDPVKK 153
>RSP31_ARATH (P92964) Arginine/serine-rich splicing factor RSP31| Length = 264 Score = 41.6 bits (96), Expect = 0.001 Identities = 26/74 (35%), Positives = 36/74 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VFV N Y + SDLE +F + G V R M G+ FV F +DAE AI++ Sbjct: 4 VFVGNFEYETRQSDLERLFDKYGRVDRVDM--------KSGYAFVYFEDERDAEDAIRKL 55 Query: 383 NGFAVAGRKIRVKL 424 + F K R+ + Sbjct: 56 DNFPFGYEKRRLSV 69 Score = 33.9 bits (76), Expect = 0.27 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Frame = +2 Query: 200 TVFVSNL-PYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 T+FV N P K D+E F G V + F FVQF T +DA +A++ Sbjct: 94 TLFVINFDPIRTKEHDIEKHFEPYGKVTNV--------RIRRNFSFVQFETQEDATKALE 145 Query: 377 QKNGFAVAGRKIRVKLAIQ 433 + R + V+ A++ Sbjct: 146 ATQRSKILDRVVSVEYALK 164
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/84 (26%), Positives = 46/84 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+TVFV + +++ + F+ G V+ ++ + + SKG+GFV F D ++ + Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIV 97 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPL 445 + + F G+K+++ AI++ L Sbjct: 98 ESQINF--HGKKLKLGPAIRKQNL 119
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/84 (26%), Positives = 46/84 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+TVFV + +++ + F+ G V+ ++ + + SKG+GFV F D ++ + Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIV 97 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPL 445 + + F G+K+++ AI++ L Sbjct: 98 ESQINF--HGKKLKLGPAIRKQNL 119
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/84 (26%), Positives = 46/84 (54%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+TVFV + +++ + F+ G V+ ++ + + SKG+GFV F D ++ + Sbjct: 39 PNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIV 97 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPL 445 + + F G+K+++ AI++ L Sbjct: 98 ESQINF--HGKKLKLGPAIRKQNL 119
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 41.6 bits (96), Expect = 0.001 Identities = 23/75 (30%), Positives = 39/75 (52%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 SP ++V +LP L++ F + G V R + SK + SKG+GFV+F + A+ Sbjct: 43 SPGVLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIV 102 Query: 371 IQQKNGFAVAGRKIR 415 + N + + R I+ Sbjct: 103 AETMNNYLMGERIIK 117
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 41.6 bits (96), Expect = 0.001 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRC-FMVASKGSETSKGFGFVQFATVQDAERAI 373 + +FV NL L FS G + + ++ S TSKGF F+ FA+ + ++ A+ Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTAL 159 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPLKER 454 + NG + R I V A +R ER Sbjct: 160 EAMNGQFLCNRAITVSYAFKRDSKGER 186 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/77 (31%), Positives = 39/77 (50%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +T++V L S L + + GPV M + + +GFGFV+F +DA+ AI+ Sbjct: 13 ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIK 72 Query: 377 QKNGFAVAGRKIRVKLA 427 N + G+ I+V A Sbjct: 73 ILNMIKLYGKPIKVNKA 89
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/76 (31%), Positives = 34/76 (44%) Frame = +2 Query: 200 TVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQ 379 T++V L L F G + M A S+ +GF F+++ +DA AI Sbjct: 7 TIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDN 66 Query: 380 KNGFAVAGRKIRVKLA 427 N + GR IRV LA Sbjct: 67 MNDSELCGRTIRVNLA 82
>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing| factor SRP55) Length = 344 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/84 (27%), Positives = 42/84 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V++ L Y + D++ FS G + + G+GFV+F +DA+ A+ + Sbjct: 4 VYIGRLSYNVREKDIQRFFSGYGRLLEV--------DLKNGYGFVEFEDSRDADDAVYEL 55 Query: 383 NGFAVAGRKIRVKLAIQRAPLKER 454 NG + G ++ V+ A R P ++R Sbjct: 56 NGKELCGERVIVEHA--RGPRRDR 77
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 41.2 bits (95), Expect = 0.002 Identities = 26/86 (30%), Positives = 41/86 (47%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 + +FV NL L FS +G + + VA + SKG+GFV + + + A+ AI+ Sbjct: 99 ANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIE 158 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKER 454 N + + I V A +R ER Sbjct: 159 AMNNQFLMNKPITVSYAFKREGKGER 184 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/79 (31%), Positives = 37/79 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 +T+++ NL S L + + GPV + + + GFGF +F QD E A Q Sbjct: 11 ATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQ 70 Query: 377 QKNGFAVAGRKIRVKLAIQ 433 N + G+ IRV A Q Sbjct: 71 ILNQVKLFGKPIRVNRASQ 89
>RAVR2_MOUSE (Q7TPD6) Protein raver-2| Length = 673 Score = 41.2 bits (95), Expect = 0.002 Identities = 18/54 (33%), Positives = 32/54 (59%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 ++NLP ++ + E + G + RCF+V S+ + SKG+GFV++ A +A Sbjct: 135 ITNLPISFTLEEFEELVRAYGNIERCFLVYSEVTGHSKGYGFVEYMKKDFAAKA 188 Score = 29.3 bits (64), Expect = 6.6 Identities = 18/74 (24%), Positives = 37/74 (50%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 + V NLP S ++ + + ++ C++ + +K FV + A+ AIQ+ Sbjct: 60 ILVKNLPQDSSSQEVHELLQDY-ELKYCYV------DRNKRTAFVTLLNGEQAQSAIQRF 112 Query: 383 NGFAVAGRKIRVKL 424 + F+ GR++ V+L Sbjct: 113 HQFSFRGRELTVQL 126
>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1| Length = 827 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/73 (27%), Positives = 38/73 (52%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V NLP+ ++ T+FS G + + K +++S+GF F +F+T ++A A Sbjct: 708 VKNLPFEVTKKEVRTLFSAYGKLV-ALRIPKKFNQSSRGFAFAEFSTAKEALNAFNSLKD 766 Query: 389 FAVAGRKIRVKLA 427 + GR++ + A Sbjct: 767 THILGRRLVIDFA 779 Score = 33.1 bits (74), Expect = 0.46 Identities = 23/79 (29%), Positives = 36/79 (45%) Frame = +2 Query: 191 SPSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERA 370 S S +FV NLP T ++ FS G V ++ GFV + + +DA RA Sbjct: 3 SSSRIFVKNLPPTITEAEFRKHFSAEGR-----QVTDVKLIPARHIGFVGYKSAEDAARA 57 Query: 371 IQQKNGFAVAGRKIRVKLA 427 ++ N + +I V +A Sbjct: 58 VKYFNRSFIRMSRISVDIA 76
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 2/85 (2%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L + DL+ F++ G V C + + S+GFGF+ F E+ + QK Sbjct: 77 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 136 Query: 383 NGFAVAGRKIRVK--LAIQRAPLKE 451 + GR I K +A+++ P+K+ Sbjct: 137 E-HRLDGRVIDPKKAMAMKKDPVKK 160
>RAVR1_RAT (Q5XI28) Protein raver-1| Length = 748 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/70 (31%), Positives = 35/70 (50%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V+NLP + + E + G + RCF+V S+ + SKG+GF ++ A RA G Sbjct: 136 VANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLG 195 Query: 389 FAVAGRKIRV 418 + R + V Sbjct: 196 KPLGPRTLYV 205
>RAVR1_MOUSE (Q9CW46) Protein raver-1| Length = 748 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/70 (31%), Positives = 35/70 (50%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V+NLP + + E + G + RCF+V S+ + SKG+GF ++ A RA G Sbjct: 136 VANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAKSDLLG 195 Query: 389 FAVAGRKIRV 418 + R + V Sbjct: 196 KPLGPRTLYV 205
>RAVR1_HUMAN (Q8IY67) Protein raver-1| Length = 606 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/70 (31%), Positives = 34/70 (48%) Frame = +2 Query: 209 VSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQKNG 388 V+NLP + E + G + RCF+V S+ + SKG+GF ++ A RA G Sbjct: 136 VANLPPSLTQQQFEELVRPFGSLERCFLVYSERTGQSKGYGFAEYMKKDSAARAKSDLLG 195 Query: 389 FAVAGRKIRV 418 + R + V Sbjct: 196 KPLGPRTLYV 205
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 40.8 bits (94), Expect = 0.002 Identities = 25/78 (32%), Positives = 38/78 (48%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +FV L DL FS+ G V + ++A K S +GFGFV F A++A K Sbjct: 100 LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159 Query: 383 NGFAVAGRKIRVKLAIQR 436 + G ++ VK A+ + Sbjct: 160 -FHPIQGHRVEVKKAVPK 176
>RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protein Rox21)| Length = 197 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 V+V NL K DLE F++ G + ++ + GF FV+F DAE+A Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-----PGFAFVEFEHRDDAEKACDIL 63 Query: 383 NGFAVAGRKIRVKLA 427 NG + G ++RV+++ Sbjct: 64 NGSELLGSQLRVEIS 78
>RSP41_ARATH (P92966) Arginine/serine-rich splicing factor RSP41| Length = 356 Score = 40.8 bits (94), Expect = 0.002 Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 VF N Y + SDLE +F + G V R M A GF FV +DAE AI+ Sbjct: 4 VFCGNFEYDARESDLERLFRKYGKVERVDMKA--------GFAFVYMEDERDAEDAIRAL 55 Query: 383 NGFAV--AGRKIRVK 421 + F GR++RV+ Sbjct: 56 DRFEYGRTGRRLRVE 70 Score = 28.9 bits (63), Expect = 8.6 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Frame = +2 Query: 200 TVFVSNLP-YTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 T+FV N ++ DLE F G + + F F+Q+ +DA RA+ Sbjct: 97 TLFVINFDAQNTRTRDLERHFEPYGKIVNV--------RIRRNFAFIQYEAQEDATRALD 148 Query: 377 QKNGFAVAGRKIRVKLAIQ 433 N + + I V+ A++ Sbjct: 149 ATNSSKLMDKVISVEYAVK 167
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 40.4 bits (93), Expect = 0.003 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%) Frame = +2 Query: 203 VFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQQK 382 +F+ NL ++++L +F + G V C +V K +GFV T Q AIQ Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQNL 60 Query: 383 NGFAVAGRKIRVKLA-IQRAP 442 NG+ + I+V+ A +RAP Sbjct: 61 NGYTLNEFAIKVEAAKSRRAP 81
>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 471 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/86 (29%), Positives = 40/86 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S +FV NLP ++ +F + G F+ KGFGF++ T AE A Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI------HKDKGFGFIRLETRTLAEIAKV 127 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKER 454 + + + G+++RV+ A A L R Sbjct: 128 ELDNMPLRGKQLRVRFACHSASLTVR 153
>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO| protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit) Length = 471 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/86 (29%), Positives = 40/86 (46%) Frame = +2 Query: 197 STVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAIQ 376 S +FV NLP ++ +F + G F+ KGFGF++ T AE A Sbjct: 74 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVFI------HKDKGFGFIRLETRTLAEIAKV 127 Query: 377 QKNGFAVAGRKIRVKLAIQRAPLKER 454 + + + G+++RV+ A A L R Sbjct: 128 ELDNMPLRGKQLRVRFACHSASLTVR 153
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/84 (26%), Positives = 45/84 (53%) Frame = +2 Query: 194 PSTVFVSNLPYTYKSSDLETVFSEVGPVRRCFMVASKGSETSKGFGFVQFATVQDAERAI 373 P+TVFV + +++ F+ G V+ ++ + + SKG+GFV F D ++ + Sbjct: 39 PNTVFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIV 97 Query: 374 QQKNGFAVAGRKIRVKLAIQRAPL 445 + + F G+K+++ AI++ L Sbjct: 98 ESQINF--HGKKLKLGPAIRKQNL 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,126,927 Number of Sequences: 219361 Number of extensions: 757914 Number of successful extensions: 3222 Number of sequences better than 10.0: 400 Number of HSP's better than 10.0 without gapping: 2819 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3153 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
