ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 315 7e-83
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 315 7e-83
3dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 7e-83
4dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for ... 315 7e-83
5emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like pr... 299 4e-78
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.10
7gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.10
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
9gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC... 42 1.6
10emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chro... 42 1.6
11emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
12gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, com... 40 6.2
13gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genom... 40 6.2
14gb|BC061828.1| Rattus norvegicus cDNA clone IMAGE:5599715, parti... 40 6.2
15gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Can... 40 6.2
16emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chr... 40 6.2
17emb|BX070094.1|CNS09Q8Y Single read from an extremity of a full-... 40 6.2
18emb|BX066998.1|CNS09NUY Single read from an extremity of a full-... 40 6.2
19emb|BX063629.1|CNS09L9D Single read from an extremity of a full-... 40 6.2
20emb|BX034964.1|CNS08Z54 Single read from an extremity of a full-... 40 6.2
21gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, comple... 40 6.2
22gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 40 6.2
23gb|AC159329.8| Mus musculus 10 BAC RP23-205H9 (Roswell Park Canc... 40 6.2
24dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
25gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete... 40 6.2
26emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-1... 40 6.2
27emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on ch... 40 6.2
28gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
29emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chr... 40 6.2
30emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chr... 40 6.2 
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score =  315 bits (159), Expect = 7e-83
 Identities = 330/387 (85%)
 Strand = Plus / Plus

                                                                         
Query: 68    acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 127
             |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 61880 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 61939

                                                                         
Query: 128   tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 187
               || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 61940 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 61999

                                                                         
Query: 188   tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 247
             |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 62000 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 62059

                                                                         
Query: 248   attatccttaagaattcactggacgcaaaagattctgcaaggaaggtgctgctgattcag 307
             |||||||||||||| ||  |||| ||||| ||||||||||  ||||  || |||||||||
Sbjct: 62060 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 62119

                                                                         
Query: 308   caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataaca 367
             |||||||||||| ||||||  || ||||||  | |||| |||||||| ||||||||||| 
Sbjct: 62120 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 62179

                                                                         
Query: 368   ctaggatcttcggtgggtgatgcccggcagacgtcatcacaagtcattgcaaagattgca 427
             |||||||||||||||  ||||||  |||| || ||||||||||||||||| ||| |||||
Sbjct: 62180 ctaggatcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgca 62239

                                        
Query: 428   tccattgagataccccgtcgggaatgg 454
             ||||||||||| ||||| || ||||||
Sbjct: 62240 tccattgagatcccccggcgtgaatgg 62266
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  315 bits (159), Expect = 7e-83
 Identities = 330/387 (85%)
 Strand = Plus / Plus

                                                                            
Query: 68       acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 127
                |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 16563141 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 16563200

                                                                            
Query: 128      tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 187
                  || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 16563201 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 16563260

                                                                            
Query: 188      tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 247
                |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 16563261 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 16563320

                                                                            
Query: 248      attatccttaagaattcactggacgcaaaagattctgcaaggaaggtgctgctgattcag 307
                |||||||||||||| ||  |||| ||||| ||||||||||  ||||  || |||||||||
Sbjct: 16563321 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 16563380

                                                                            
Query: 308      caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataaca 367
                |||||||||||| ||||||  || ||||||  | |||| |||||||| ||||||||||| 
Sbjct: 16563381 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 16563440

                                                                            
Query: 368      ctaggatcttcggtgggtgatgcccggcagacgtcatcacaagtcattgcaaagattgca 427
                |||||||||||||||  ||||||  |||| || ||||||||||||||||| ||| |||||
Sbjct: 16563441 ctaggatcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgca 16563500

                                           
Query: 428      tccattgagataccccgtcgggaatgg 454
                ||||||||||| ||||| || ||||||
Sbjct: 16563501 tccattgagatcccccggcgtgaatgg 16563527
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>dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029L11, full
           insert sequence
          Length = 3150

 Score =  315 bits (159), Expect = 7e-83
 Identities = 330/387 (85%)
 Strand = Plus / Plus

                                                                       
Query: 68  acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 127
           |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 288 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 347

                                                                       
Query: 128 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 187
             || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 348 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 407

                                                                       
Query: 188 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 247
           |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 408 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 467

                                                                       
Query: 248 attatccttaagaattcactggacgcaaaagattctgcaaggaaggtgctgctgattcag 307
           |||||||||||||| ||  |||| ||||| ||||||||||  ||||  || |||||||||
Sbjct: 468 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 527

                                                                       
Query: 308 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataaca 367
           |||||||||||| ||||||  || ||||||  | |||| |||||||| ||||||||||| 
Sbjct: 528 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 587

                                                                       
Query: 368 ctaggatcttcggtgggtgatgcccggcagacgtcatcacaagtcattgcaaagattgca 427
           |||||||||||||||  ||||||  |||| || ||||||||||||||||| ||| |||||
Sbjct: 588 ctaggatcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgca 647

                                      
Query: 428 tccattgagataccccgtcgggaatgg 454
           ||||||||||| ||||| || ||||||
Sbjct: 648 tccattgagatcccccggcgtgaatgg 674
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>dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta1,
           complete cds
          Length = 3115

 Score =  315 bits (159), Expect = 7e-83
 Identities = 330/387 (85%)
 Strand = Plus / Plus

                                                                       
Query: 68  acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 127
           |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| 
Sbjct: 248 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 307

                                                                       
Query: 128 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 187
             || ||||||||  ||| ||||||||||||||||||||||||||||||||||||| || 
Sbjct: 308 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 367

                                                                       
Query: 188 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 247
           |||||||| |||||  | ||| || ||||||  ||||||||||||||| |||||||||||
Sbjct: 368 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 427

                                                                       
Query: 248 attatccttaagaattcactggacgcaaaagattctgcaaggaaggtgctgctgattcag 307
           |||||||||||||| ||  |||| ||||| ||||||||||  ||||  || |||||||||
Sbjct: 428 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 487

                                                                       
Query: 308 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgataaca 367
           |||||||||||| ||||||  || ||||||  | |||| |||||||| ||||||||||| 
Sbjct: 488 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 547

                                                                       
Query: 368 ctaggatcttcggtgggtgatgcccggcagacgtcatcacaagtcattgcaaagattgca 427
           |||||||||||||||  ||||||  |||| || ||||||||||||||||| ||| |||||
Sbjct: 548 ctaggatcttcggtgcatgatgctaggcatacctcatcacaagtcattgccaaggttgca 607

                                      
Query: 428 tccattgagataccccgtcgggaatgg 454
           ||||||||||| ||||| || ||||||
Sbjct: 608 tccattgagatcccccggcgtgaatgg 634
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>emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like protein Imb2
          Length = 2838

 Score =  299 bits (151), Expect = 4e-78
 Identities = 310/363 (85%)
 Strand = Plus / Plus

                                                                       
Query: 92  ctgctagctgctcagtctccagatggtaaccttcgctcagcagcagaagccaacatcaag 151
           |||||| | ||||| ||| ||||||||||||||||   || ||||||||  ||| |||||
Sbjct: 8   ctgctatcagctcaatctgcagatggtaaccttcgggtagtagcagaagggaacctcaag 67

                                                                       
Query: 152 cagttccaggagcagaatcttcccaacttcctcctatccttgtcggtggagttatcgaat 211
           |||||||||||||||||||||||||||||||| || |||||||| |||||  | ||| ||
Sbjct: 68  cagttccaggagcagaatcttcccaacttccttctctccttgtcagtggaactttcggat 127

                                                                       
Query: 212 gatgaaaggccaccagagtctagaagacttgctggtattatccttaagaattcactggac 271
            ||||||  ||||||||||||||| ||||||||||||||||||||||||| ||  |||| 
Sbjct: 128 aatgaaaaaccaccagagtctagacgacttgctggtattatccttaagaactccttggat 187

                                                                       
Query: 272 gcaaaagattctgcaaggaaggtgctgctgattcagcaatgggtcagcttggatcactcg 331
           ||||| ||||||||||  ||||  || ||||||||||||||||||||| ||||||  || 
Sbjct: 188 gcaaaggattctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatca 247

                                                                       
Query: 332 atcaaatcgcagattaaggagtcattgctgataacactaggatcttcggtgggtgatgcc 391
           ||||||  | |||| |||||||| ||||||||||| |||||||||||||||  |||||| 
Sbjct: 248 atcaaacagaagataaaggagtccttgctgataacgctaggatcttcggtgcatgatgct 307

                                                                       
Query: 392 cggcagacgtcatcacaagtcattgcaaagattgcatccattgagataccccgtcgggaa 451
            |||| || ||||||||||||||||| ||| |||||||||||||||| ||||| || |||
Sbjct: 308 aggcatacctcatcacaagtcattgccaaggttgcatccattgagatcccccggcgtgaa 367

              
Query: 452 tgg 454
           |||
Sbjct: 368 tgg 370
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 74       atggatatcactcagattctgctagctgctcagtc 108
                ||||||||||| ||| ||||||||||||| |||||
Sbjct: 10255004 atggatatcacacaggttctgctagctgcgcagtc 10254970



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 234      gaagacttgctggtattatccttaagaattcactggacgcaaaaga 279
                |||| |||||||||||| | |||||||||||  |||| ||||||||
Sbjct: 10254844 gaaggcttgctggtattttgcttaagaattccttggatgcaaaaga 10254799



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        caggcgagcgagcgtgcgcg 27
                ||||||||||||||||||||
Sbjct: 19047081 caggcgagcgagcgtgcgcg 19047062
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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 74     atggatatcactcagattctgctagctgctcagtc 108
              ||||||||||| ||| ||||||||||||| |||||
Sbjct: 116417 atggatatcacacaggttctgctagctgcgcagtc 116383



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 234    gaagacttgctggtattatccttaagaattcactggacgcaaaaga 279
              |||| |||||||||||| | |||||||||||  |||| ||||||||
Sbjct: 116257 gaaggcttgctggtattttgcttaagaattccttggatgcaaaaga 116212
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 74       atggatatcactcagattctgctagctgctcagtc 108
                ||||||||||| ||| ||||||||||||| |||||
Sbjct: 10253105 atggatatcacacaggttctgctagctgcgcagtc 10253071



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 234      gaagacttgctggtattatccttaagaattcactggacgcaaaaga 279
                |||| |||||||||||| | |||||||||||  |||| ||||||||
Sbjct: 10252945 gaaggcttgctggtattttgcttaagaattccttggatgcaaaaga 10252900



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        caggcgagcgagcgtgcgcg 27
                ||||||||||||||||||||
Sbjct: 19041122 caggcgagcgagcgtgcgcg 19041103
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>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence,
             complete sequence
          Length = 80381

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 257   aagaattcactggacgcaaaagattctgc 285
             |||||||| |||||||| |||||||||||
Sbjct: 34823 aagaattctctggacgccaaagattctgc 34851



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 257   aagaattcactggacgcaaaagattctgc 285
             |||||||| |||||||| |||||||||||
Sbjct: 32349 aagaattctctggacgccaaagattctgc 32321
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>emb|AL513487.3| Human DNA sequence from clone RP13-63I15 on chromosome Xq24-26.2,
             complete sequence
          Length = 144177

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 405   cacaagtcattgcaaagattgcatc 429
             |||||||||| ||||||||||||||
Sbjct: 13183 cacaagtcatagcaaagattgcatc 13159
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>emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH64ZE06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2944

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 257 aagaattcactggacgcaaaagattctgc 285
           |||||||| |||||||| |||||||||||
Sbjct: 352 aagaattctctggacgccaaagattctgc 380
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>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence
          Length = 210003

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aggcgggcaggcgagcgagc 20
             ||||||||||||||||||||
Sbjct: 82017 aggcgggcaggcgagcgagc 81998
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>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete
              sequence
          Length = 171437

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      caggcgagcgagcgtgcgcg 27
              ||||||||||||||||||||
Sbjct: 110496 caggcgagcgagcgtgcgcg 110515
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>gb|BC061828.1| Rattus norvegicus cDNA clone IMAGE:5599715, partial cds
          Length = 3356

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  gcagaatcttcccaacttcc 182
            ||||||||||||||||||||
Sbjct: 1730 gcagaatcttcccaacttcc 1749
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>gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 217393

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 162   agcagaatcttcccaacttcctcctatccttg 193
             |||| ||||||||||| ||| |||||||||||
Sbjct: 18245 agcacaatcttcccaagttcatcctatccttg 18276
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>emb|AL160278.24| Human DNA sequence from clone RP11-574G7 on chromosome 9 Contains the
             5' end of the GNAQ gene for guanine nucleotide binding
             protein (G protein) q polypeptide and a CpG island,
             complete sequence
          Length = 215399

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   aggtgctgctgattcagcaa 310
             ||||||||||||||||||||
Sbjct: 35916 aggtgctgctgattcagcaa 35935
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>emb|BX070094.1|CNS09Q8Y Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC7AA12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 684

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gccaacatcaagcagttcca 159
           ||||||||||||||||||||
Sbjct: 432 gccaacatcaagcagttcca 451
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>emb|BX066998.1|CNS09NUY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC50CA07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 869

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gccaacatcaagcagttcca 159
           ||||||||||||||||||||
Sbjct: 447 gccaacatcaagcagttcca 466
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>emb|BX063629.1|CNS09L9D Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC45CC12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 552

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gccaacatcaagcagttcca 159
           ||||||||||||||||||||
Sbjct: 442 gccaacatcaagcagttcca 461
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>emb|BX034964.1|CNS08Z54 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA6AD09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 gccaacatcaagcagttcca 159
           ||||||||||||||||||||
Sbjct: 430 gccaacatcaagcagttcca 449
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>gb|AC022446.6| Homo sapiens chromosome 5 clone RP11-5H13, complete sequence
          Length = 188534

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   tccttaagaattcactggac 271
             ||||||||||||||||||||
Sbjct: 64567 tccttaagaattcactggac 64586
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>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
              sequence
          Length = 165394

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      caggcgagcgagcgtgcgcg 27
              ||||||||||||||||||||
Sbjct: 117967 caggcgagcgagcgtgcgcg 117948
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>gb|AC159329.8| Mus musculus 10 BAC RP23-205H9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 213287

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 162    agcagaatcttcccaacttcctcctatccttg 193
              |||| ||||||||||| ||| |||||||||||
Sbjct: 188251 agcacaatcttcccaagttcatcctatccttg 188282
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        caggcgagcgagcgtgcgcg 27
                ||||||||||||||||||||
Sbjct: 19490101 caggcgagcgagcgtgcgcg 19490082
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>gb|AC150476.3| Dasypus novemcinctus clone VMRC5-421E14, complete sequence
          Length = 68689

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   cagagtctagaagacttgct 244
             ||||||||||||||||||||
Sbjct: 26460 cagagtctagaagacttgct 26479
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>emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-176H8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170919

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   tcgcagattaaggagtcatt 357
             ||||||||||||||||||||
Sbjct: 51487 tcgcagattaaggagtcatt 51506
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>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete
             sequence
          Length = 194065

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tgctagctgctcagtctcca 112
             ||||||||||||||||||||
Sbjct: 50998 tgctagctgctcagtctcca 50979
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 8        caggcgagcgagcgtgcgcg 27
                ||||||||||||||||||||
Sbjct: 19501377 caggcgagcgagcgtgcgcg 19501358
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>emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chromosome X, complete
              sequence
          Length = 130107

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 249    ttatccttaagaattcactggacgcaaa 276
              |||||| ||||||||||||||| |||||
Sbjct: 128123 ttatccataagaattcactggaagcaaa 128096
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>emb|AL845172.3| Mouse DNA sequence from clone RP23-285J17 on chromosome 2, complete
              sequence
          Length = 185138

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 162    agcagaatcttcccaacttcctcc 185
              ||||||| ||||||||||||||||
Sbjct: 133581 agcagaaacttcccaacttcctcc 133604


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,402,324
Number of Sequences: 3902068
Number of extensions: 3402324
Number of successful extensions: 63441
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63265
Number of HSP's gapped (non-prelim): 176
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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