Clone Name | bastl50c04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like p... | 30 | 3.1 | 2 | BCTN5_BOVIN (P19660) Bactenecin-5 precursor (Bac5) (Cathelicidin... | 29 | 5.2 | 3 | RS3_SYMTH (Q67JU9) 30S ribosomal protein S3 | 28 | 8.9 |
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>KI13B_HUMAN (Q9NQT8) Kinesin-like protein KIF13B (Kinesin-like protein GAKIN)| Length = 1826 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 467 GSVRRXSTGAEAGRPERSWQATVPASTVNL 378 G VRR STG G PE AT+ S NL Sbjct: 1772 GPVRRRSTGLRLGAPEARRSATLSGSATNL 1801
>BCTN5_BOVIN (P19660) Bactenecin-5 precursor (Bac5) (Cathelicidin-2) (PR-42)| Length = 176 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 3/34 (8%) Frame = +3 Query: 27 RPPIQLTIFSPLHP---PSVLPHFREPLHAPLSP 119 RPPI+ + P P P + P R P PL P Sbjct: 138 RPPIRPPFYPPFRPPIRPPIFPPIRPPFRPPLGP 171
>RS3_SYMTH (Q67JU9) 30S ribosomal protein S3| Length = 267 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = -3 Query: 443 GAEAGRPERSWQATVPASTV 384 GAE R ER+W+ TVP T+ Sbjct: 159 GAEIARSERAWEGTVPLHTL 178 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,486,986 Number of Sequences: 219361 Number of extensions: 443907 Number of successful extensions: 1656 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1602 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1655 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)