Clone Name | bastl50b07 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y3444_MYCBO (P65171) Hypothetical protein Mb3444c | 29 | 3.1 | 2 | Y3410_MYCTU (P65170) Hypothetical protein Rv3410c/MT3518 | 29 | 3.1 | 3 | Y388_MYCLE (Q49721) Hypothetical protein ML0388 | 28 | 4.1 | 4 | SY61_DISOM (P24505) Synaptotagmin A (Synaptic vesicle protein O-... | 28 | 7.0 |
---|
>Y3444_MYCBO (P65171) Hypothetical protein Mb3444c| Length = 375 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 345 VTHAINLFPHRRQLVSPVIVATEASAAAVQGGII--HQAAAELQPL 214 VT A+ + P Q ++PV+VA +QG I+ + A++ +PL Sbjct: 135 VTTAVRVSPQNAQWLTPVLVAAGIDLLVIQGTIVSAERVASDGEPL 180
>Y3410_MYCTU (P65170) Hypothetical protein Rv3410c/MT3518| Length = 375 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 345 VTHAINLFPHRRQLVSPVIVATEASAAAVQGGII--HQAAAELQPL 214 VT A+ + P Q ++PV+VA +QG I+ + A++ +PL Sbjct: 135 VTTAVRVSPQNAQWLTPVLVAAGIDLLVIQGTIVSAERVASDGEPL 180
>Y388_MYCLE (Q49721) Hypothetical protein ML0388| Length = 375 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -1 Query: 345 VTHAINLFPHRRQLVSPVIVATEASAAAVQGGII 244 VT A+ + P Q+++PV++A VQG I+ Sbjct: 135 VTTAVRVSPQNAQVLTPVLLAAGIDLLVVQGSIV 168
>SY61_DISOM (P24505) Synaptotagmin A (Synaptic vesicle protein O-p65-A)| Length = 427 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +2 Query: 248 MPPWTAAAEASVATMTGLTSCLLWGKRLI 334 +PPW A A VA + GLT C K+ + Sbjct: 60 LPPWALVAIAIVAIILGLTCCFCICKKCL 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,595,182 Number of Sequences: 219361 Number of extensions: 299004 Number of successful extensions: 926 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 924 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 926 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)