ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl50b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
2dbj|AK072195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
3dbj|AK070157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
4dbj|AK102498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
5dbj|AK067500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
6ref|NM_191402.1| Oryza sativa (japonica cultivar-group), predic... 200 3e-48
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
8dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
9dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
11dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
12dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic D... 123 5e-25
13dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 46 0.10
14gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.40
15gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.40
16emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M1... 42 1.6
17emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
18gb|AC113935.2| Homo sapiens chromosome 1 clone RP4-706A16, compl... 42 1.6
19dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.6
20gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, com... 42 1.6
21dbj|AK025277.1| Homo sapiens cDNA: FLJ21624 fis, clone COL08006 42 1.6
22gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 40 6.2
23gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete... 40 6.2
24gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, co... 40 6.2
25gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
26gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
27gb|AC113305.7| Mus musculus chromosome 10, clone RP23-433H22, co... 40 6.2
28gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, co... 40 6.2
29gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.2
30gb|AC158948.3| Mus musculus chromosome 1, clone RP24-263I3, comp... 40 6.2
31gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, com... 40 6.2
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33gb|AF541963.1| Glycine max cv Williams 82 BAC clone Gm_ISb001_09... 40 6.2
34ref|XM_315632.2| Anopheles gambiae str. PEST ENSANGP00000007272 ... 40 6.2
35gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, comple... 40 6.2 
>dbj|AK100439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089F03, full
           insert sequence
          Length = 3369

 Score =  347 bits (175), Expect = 2e-92
 Identities = 292/331 (88%)
 Strand = Plus / Plus

                                                                       
Query: 105 ccgctgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacg 164
           |||| |||| || |||||| || ||||||||||||||||||||||||||||| |  || |
Sbjct: 227 ccgccgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagg 286

                                                                       
Query: 165 ggctcgagctaggttgcttggaggtcgacggcggccatggcaatggcggcggattcagcg 224
           | ||||||||  ||||||||||||  | ||||||  ||||||||||||| ||||||||||
Sbjct: 287 gactcgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcg 346

                                                                       
Query: 225 gggcagaaaatgggctgtaccgtctctcttcggttggagaagagattgacaatctaagta 284
           || ||||| ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 347 ggccagaagatgggctgtaccggctctcttctgttggagaagagattgataatctgagta 406

                                                                       
Query: 285 acttgtcggacgtcgatgatcttgcgagcacttttgctaagttgaaccgaaccgttagtg 344
           ||||||| ||  | ||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 407 acttgtcagaaattgatgatcttgcgagcacttttgcaaagttgaaccgaagcattagtg 466

                                                                       
Query: 345 gagcacggaatcctggtgttattggtgacagacgatccatttcaagaggaagttctttaa 404
           || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 467 gaacacggaatcctggtgttattggtgacagaagatccatctcaagaggaagttctctaa 526

                                          
Query: 405 ctgttgattggactgaggatgtagagtttcc 435
           ||||||||||| |||| ||||  ||||||||
Sbjct: 527 ctgttgattgggctgaagatgctgagtttcc 557
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>dbj|AK072195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151K20, full
           insert sequence
          Length = 3262

 Score =  347 bits (175), Expect = 2e-92
 Identities = 292/331 (88%)
 Strand = Plus / Plus

                                                                       
Query: 105 ccgctgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacg 164
           |||| |||| || |||||| || ||||||||||||||||||||||||||||| |  || |
Sbjct: 228 ccgccgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagg 287

                                                                       
Query: 165 ggctcgagctaggttgcttggaggtcgacggcggccatggcaatggcggcggattcagcg 224
           | ||||||||  ||||||||||||  | ||||||  ||||||||||||| ||||||||||
Sbjct: 288 gactcgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcg 347

                                                                       
Query: 225 gggcagaaaatgggctgtaccgtctctcttcggttggagaagagattgacaatctaagta 284
           || ||||| ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 348 ggccagaagatgggctgtaccggctctcttctgttggagaagagattgataatctgagta 407

                                                                       
Query: 285 acttgtcggacgtcgatgatcttgcgagcacttttgctaagttgaaccgaaccgttagtg 344
           ||||||| ||  | ||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 408 acttgtcagaaattgatgatcttgcgagcacttttgcaaagttgaaccgaagcattagtg 467

                                                                       
Query: 345 gagcacggaatcctggtgttattggtgacagacgatccatttcaagaggaagttctttaa 404
           || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 468 gaacacggaatcctggtgttattggtgacagaagatccatctcaagaggaagttctctaa 527

                                          
Query: 405 ctgttgattggactgaggatgtagagtttcc 435
           ||||||||||| |||| ||||  ||||||||
Sbjct: 528 ctgttgattgggctgaagatgctgagtttcc 558
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>dbj|AK070157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023046D01, full
           insert sequence
          Length = 3981

 Score =  347 bits (175), Expect = 2e-92
 Identities = 292/331 (88%)
 Strand = Plus / Plus

                                                                       
Query: 105 ccgctgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacg 164
           |||| |||| || |||||| || ||||||||||||||||||||||||||||| |  || |
Sbjct: 226 ccgccgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagg 285

                                                                       
Query: 165 ggctcgagctaggttgcttggaggtcgacggcggccatggcaatggcggcggattcagcg 224
           | ||||||||  ||||||||||||  | ||||||  ||||||||||||| ||||||||||
Sbjct: 286 gactcgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcg 345

                                                                       
Query: 225 gggcagaaaatgggctgtaccgtctctcttcggttggagaagagattgacaatctaagta 284
           || ||||| ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||
Sbjct: 346 ggccagaagatgggctgtaccggctctcttctgttggagaagagattgataatctgagta 405

                                                                       
Query: 285 acttgtcggacgtcgatgatcttgcgagcacttttgctaagttgaaccgaaccgttagtg 344
           ||||||| ||  | ||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 406 acttgtcagaaattgatgatcttgcgagcacttttgcaaagttgaaccgaagcattagtg 465

                                                                       
Query: 345 gagcacggaatcctggtgttattggtgacagacgatccatttcaagaggaagttctttaa 404
           || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 466 gaacacggaatcctggtgttattggtgacagaagatccatctcaagaggaagttctctaa 525

                                          
Query: 405 ctgttgattggactgaggatgtagagtttcc 435
           ||||||||||| |||| ||||  ||||||||
Sbjct: 526 ctgttgattgggctgaagatgctgagtttcc 556
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>dbj|AK102498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095B10, full
           insert sequence
          Length = 3458

 Score =  264 bits (133), Expect = 2e-67
 Identities = 190/209 (90%)
 Strand = Plus / Plus

                                                                       
Query: 227 gcagaaaatgggctgtaccgtctctcttcggttggagaagagattgacaatctaagtaac 286
           |||||| | ||||||||||| ||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 355 gcagaagaagggctgtaccggctctcctctgttggagaagagattgataatctgagtaac 414

                                                                       
Query: 287 ttgtcggacgtcgatgatcttgcgagcacttttgctaagttgaaccgaaccgttagtgga 346
           ||||| ||  | ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 415 ttgtccgatattgatgatcttgcgagcacttttgcaaagttgaaccgaaccattagtgga 474

                                                                       
Query: 347 gcacggaatcctggtgttattggtgacagacgatccatttcaagaggaagttctttaact 406
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 475 acacggaatcctggtgttattggtgacagacgatccatctcaagaggaagttctctaact 534

                                        
Query: 407 gttgattggactgaggatgtagagtttcc 435
           ||||||||| |||| |||||||| |||||
Sbjct: 535 gttgattgggctgaagatgtagaatttcc 563



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 105 ccgctgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacg 164
           ||||| |||||| ||| || |||| ||||||| ||||||||||||||||||| |  || |
Sbjct: 221 ccgctccagataatttcgatgccgcgcagtactccttcttcgggaaggagccactggagg 280

                                   
Query: 165 ggctcgagctaggttgcttggagg 188
           ||||||||||  ||||||||||||
Sbjct: 281 ggctcgagctcagttgcttggagg 304
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>dbj|AK067500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111P10, full
           insert sequence
          Length = 3286

 Score =  264 bits (133), Expect = 2e-67
 Identities = 190/209 (90%)
 Strand = Plus / Plus

                                                                       
Query: 227 gcagaaaatgggctgtaccgtctctcttcggttggagaagagattgacaatctaagtaac 286
           |||||| | ||||||||||| ||||| || ||||||||||||||||| ||||| ||||||
Sbjct: 363 gcagaagaagggctgtaccggctctcctctgttggagaagagattgataatctgagtaac 422

                                                                       
Query: 287 ttgtcggacgtcgatgatcttgcgagcacttttgctaagttgaaccgaaccgttagtgga 346
           ||||| ||  | ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 423 ttgtccgatattgatgatcttgcgagcacttttgcaaagttgaaccgaaccattagtgga 482

                                                                       
Query: 347 gcacggaatcctggtgttattggtgacagacgatccatttcaagaggaagttctttaact 406
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 483 acacggaatcctggtgttattggtgacagacgatccatctcaagaggaagttctctaact 542

                                        
Query: 407 gttgattggactgaggatgtagagtttcc 435
           ||||||||| |||| |||||||| |||||
Sbjct: 543 gttgattgggctgaagatgtagaatttcc 571



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 111 cagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggctcg 170
           |||||| ||| || |||| ||||||| ||||||||||||||||||| |  || |||||||
Sbjct: 235 cagataatttcgatgccgcgcagtaccccttcttcgggaaggagccactggaggggctcg 294

                             
Query: 171 agctaggttgcttggagg 188
           ||||  ||||||||||||
Sbjct: 295 agctcagttgcttggagg 312
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>ref|NM_191402.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2292

 Score =  200 bits (101), Expect = 3e-48
 Identities = 152/169 (89%)
 Strand = Plus / Plus

                                                                       
Query: 267 agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgctaagt 326
           ||||||| ||||| ||||||||||| ||  | ||||||||||||||||||||||| ||||
Sbjct: 8   agattgataatctgagtaacttgtcagaaattgatgatcttgcgagcacttttgcaaagt 67

                                                                       
Query: 327 tgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatccattt 386
           ||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||| |
Sbjct: 68  tgaaccgaagcattagtggaacacggaatcctggtgttattggtgacagaagatccatct 127

                                                            
Query: 387 caagaggaagttctttaactgttgattggactgaggatgtagagtttcc 435
           |||||||||||||| |||||||||||||| |||| ||||  ||||||||
Sbjct: 128 caagaggaagttctctaactgttgattgggctgaagatgctgagtttcc 176
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  151 bits (76), Expect = 2e-33
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                            
Query: 109      tgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggct 168
                ||||| || |||||| || ||||||||||||||||||||||||||||| |  || || ||
Sbjct: 32427008 tgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagggact 32427067

                                                                            
Query: 169      cgagctaggttgcttggaggtcgacggcggccatggcaatggcggcggattcagcggggc 228
                ||||||  ||||||||||||  | ||||||  ||||||||||||| |||||||||||| |
Sbjct: 32427068 cgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcgggcc 32427127

                                                        
Query: 229      agaaaatgggctgtaccgtctctcttcggttggagaagag 268
                |||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 32427128 agaagatgggctgtaccggctctcttctgttggagaagag 32427167



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                            
Query: 324      agttgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatcca 383
                |||||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 32429347 agttgaaccgaagcattagtggaacacggaatcctggtgttattggtgacagaagatcca 32429406

                              
Query: 384      tttcaagaggaagt 397
                | ||||||||||||
Sbjct: 32429407 tctcaagaggaagt 32429420



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 267      agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgc 321
                ||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||||
Sbjct: 32428468 agattgataatctgagtaacttgtcagaaattgatgatcttgcgagcacttttgc 32428522



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 396      gttctttaactgttgattggactgaggatgtagagtttcc 435
                ||||| |||||||||||||| |||| ||||  ||||||||
Sbjct: 32429951 gttctctaactgttgattgggctgaagatgctgagtttcc 32429990
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>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0665A11
          Length = 166421

 Score =  151 bits (76), Expect = 2e-33
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                         
Query: 109   tgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggct 168
             ||||| || |||||| || ||||||||||||||||||||||||||||| |  || || ||
Sbjct: 14529 tgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagggact 14588

                                                                         
Query: 169   cgagctaggttgcttggaggtcgacggcggccatggcaatggcggcggattcagcggggc 228
             ||||||  ||||||||||||  | ||||||  ||||||||||||| |||||||||||| |
Sbjct: 14589 cgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcgggcc 14648

                                                     
Query: 229   agaaaatgggctgtaccgtctctcttcggttggagaagag 268
             |||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 14649 agaagatgggctgtaccggctctcttctgttggagaagag 14688



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                         
Query: 324   agttgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatcca 383
             |||||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 16868 agttgaaccgaagcattagtggaacacggaatcctggtgttattggtgacagaagatcca 16927

                           
Query: 384   tttcaagaggaagt 397
             | ||||||||||||
Sbjct: 16928 tctcaagaggaagt 16941



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 267   agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgc 321
             ||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||||
Sbjct: 15989 agattgataatctgagtaacttgtcagaaattgatgatcttgcgagcacttttgc 16043



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 396   gttctttaactgttgattggactgaggatgtagagtttcc 435
             ||||| |||||||||||||| |||| ||||  ||||||||
Sbjct: 17472 gttctctaactgttgattgggctgaagatgctgagtttcc 17511
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>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1143G03
          Length = 137770

 Score =  151 bits (76), Expect = 2e-33
 Identities = 139/160 (86%)
 Strand = Plus / Plus

                                                                          
Query: 109    tgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggct 168
              ||||| || |||||| || ||||||||||||||||||||||||||||| |  || || ||
Sbjct: 106505 tgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagggact 106564

                                                                          
Query: 169    cgagctaggttgcttggaggtcgacggcggccatggcaatggcggcggattcagcggggc 228
              ||||||  ||||||||||||  | ||||||  ||||||||||||| |||||||||||| |
Sbjct: 106565 cgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcgggcc 106624

                                                      
Query: 229    agaaaatgggctgtaccgtctctcttcggttggagaagag 268
              |||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 106625 agaagatgggctgtaccggctctcttctgttggagaagag 106664



 Score =  107 bits (54), Expect = 3e-20
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                          
Query: 324    agttgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatcca 383
              |||||||||||| | |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 108844 agttgaaccgaagcattagtggaacacggaatcctggtgttattggtgacagaagatcca 108903

                            
Query: 384    tttcaagaggaagt 397
              | ||||||||||||
Sbjct: 108904 tctcaagaggaagt 108917



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 267    agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgc 321
              ||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||||
Sbjct: 107965 agattgataatctgagtaacttgtcagaaattgatgatcttgcgagcacttttgc 108019



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 396    gttctttaactgttgattggactgaggatgtagagtttcc 435
              ||||| |||||||||||||| |||| ||||  ||||||||
Sbjct: 109448 gttctctaactgttgattgggctgaagatgctgagtttcc 109487
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  123 bits (62), Expect = 5e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                            
Query: 324      agttgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatcca 383
                |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18808266 agttgaaccgaaccattagtggaacacggaatcctggtgttattggtgacagacgatcca 18808325

                              
Query: 384      tttcaagaggaagt 397
                | ||||||||||||
Sbjct: 18808326 tctcaagaggaagt 18808339



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                            
Query: 109      tgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggct 168
                |||||||| ||| || |||| ||||||| ||||||||||||||||||| |  || |||||
Sbjct: 18805957 tgcagataatttcgatgccgcgcagtactccttcttcgggaaggagccactggaggggct 18806016

                                    
Query: 169      cgagctaggttgcttggagg 188
                ||||||  ||||||||||||
Sbjct: 18806017 cgagctcagttgcttggagg 18806036



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 267      agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgc 321
                ||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||||
Sbjct: 18807457 agattgataatctgagtaacttgtccgatattgatgatcttgcgagcacttttgc 18807511



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 396      gttctttaactgttgattggactgaggatgtagagtttcc 435
                ||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 18808915 gttctctaactgttgattgggctgaagatgtagaatttcc 18808954



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 227      gcagaaaatgggctgtaccgtctctcttcggttggagaagag 268
                |||||| | ||||||||||| ||||| || ||||||||||||
Sbjct: 18806087 gcagaagaagggctgtaccggctctcctctgttggagaagag 18806128
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>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0071O21
          Length = 158410

 Score =  123 bits (62), Expect = 5e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                          
Query: 324    agttgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatcca 383
              |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 151018 agttgaaccgaaccattagtggaacacggaatcctggtgttattggtgacagacgatcca 151077

                            
Query: 384    tttcaagaggaagt 397
              | ||||||||||||
Sbjct: 151078 tctcaagaggaagt 151091



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                          
Query: 109    tgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggct 168
              |||||||| ||| || |||| ||||||| ||||||||||||||||||| |  || |||||
Sbjct: 148709 tgcagataatttcgatgccgcgcagtactccttcttcgggaaggagccactggaggggct 148768

                                  
Query: 169    cgagctaggttgcttggagg 188
              ||||||  ||||||||||||
Sbjct: 148769 cgagctcagttgcttggagg 148788



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 267    agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgc 321
              ||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||||
Sbjct: 150209 agattgataatctgagtaacttgtccgatattgatgatcttgcgagcacttttgc 150263



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 396    gttctttaactgttgattggactgaggatgtagagtttcc 435
              ||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 151667 gttctctaactgttgattgggctgaagatgtagaatttcc 151706



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 227    gcagaaaatgggctgtaccgtctctcttcggttggagaagag 268
              |||||| | ||||||||||| ||||| || ||||||||||||
Sbjct: 148839 gcagaagaagggctgtaccggctctcctctgttggagaagag 148880
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>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0004O05
          Length = 140513

 Score =  123 bits (62), Expect = 5e-25
 Identities = 71/74 (95%)
 Strand = Plus / Plus

                                                                         
Query: 324   agttgaaccgaaccgttagtggagcacggaatcctggtgttattggtgacagacgatcca 383
             |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 53741 agttgaaccgaaccattagtggaacacggaatcctggtgttattggtgacagacgatcca 53800

                           
Query: 384   tttcaagaggaagt 397
             | ||||||||||||
Sbjct: 53801 tctcaagaggaagt 53814



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                         
Query: 109   tgcagatagttttgacgccgggcagtacgccttcttcgggaaggagccgcgtgacgggct 168
             |||||||| ||| || |||| ||||||| ||||||||||||||||||| |  || |||||
Sbjct: 51432 tgcagataatttcgatgccgcgcagtactccttcttcgggaaggagccactggaggggct 51491

                                 
Query: 169   cgagctaggttgcttggagg 188
             ||||||  ||||||||||||
Sbjct: 51492 cgagctcagttgcttggagg 51511



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 267   agattgacaatctaagtaacttgtcggacgtcgatgatcttgcgagcacttttgc 321
             ||||||| ||||| ||||||||||| ||  | |||||||||||||||||||||||
Sbjct: 52932 agattgataatctgagtaacttgtccgatattgatgatcttgcgagcacttttgc 52986



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 396   gttctttaactgttgattggactgaggatgtagagtttcc 435
             ||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 54390 gttctctaactgttgattgggctgaagatgtagaatttcc 54429



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 227   gcagaaaatgggctgtaccgtctctcttcggttggagaagag 268
             |||||| | ||||||||||| ||||| || ||||||||||||
Sbjct: 51562 gcagaagaagggctgtaccggctctcctctgttggagaagag 51603
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 194    ggcggccatggcaatggcggcgg 216
              |||||||||||||||||||||||
Sbjct: 869233 ggcggccatggcaatggcggcgg 869255
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 192     acggcggccatggcaatggcggcgga 217
               |||||||||||||||| |||||||||
Sbjct: 2340547 acggcggccatggcaacggcggcgga 2340572



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 192     acggcggccatggcaatggcggcgg 216
               |||||||||| ||||||||||||||
Sbjct: 2340637 acggcggccacggcaatggcggcgg 2340661
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 192     acggcggccatggcaatggcggcgga 217
               |||||||||||||||| |||||||||
Sbjct: 1155345 acggcggccatggcaacggcggcgga 1155320



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 192     acggcggccatggcaatggcggcgg 216
               |||||||||| ||||||||||||||
Sbjct: 1155255 acggcggccacggcaatggcggcgg 1155231
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>emb|AL035409.15|HS564M11 Human DNA sequence from clone RP4-564M11 on chromosome 1p31.1 Contains
             the 3' end of the SIAT7E gene for sialyltransferase 7
             ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,
             3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase)
             E, a novel gene and 3' end of the PIGK gene for
             phosphatidylinositol glycan class K, complete sequence
          Length = 138783

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 414   ggactgaggatgtagagtttc 434
             |||||||||||||||||||||
Sbjct: 31329 ggactgaggatgtagagtttc 31309
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 192     acggcggccatggcaatggcggcgg 216
               |||||||||| ||||||||||||||
Sbjct: 1037032 acggcggccacggcaatggcggcgg 1037008
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>gb|AC113935.2| Homo sapiens chromosome 1 clone RP4-706A16, complete sequence
          Length = 142422

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 414  ggactgaggatgtagagtttc 434
            |||||||||||||||||||||
Sbjct: 3581 ggactgaggatgtagagtttc 3601
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 186     aggtcgacggcggccatggcaatggcggc 214
               |||||||||||| ||| ||||||||||||
Sbjct: 4875933 aggtcgacggcgcccagggcaatggcggc 4875905
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>gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, complete sequence
          Length = 219013

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     agatcctccgctgcagatagt 118
              |||||||||||||||||||||
Sbjct: 118677 agatcctccgctgcagatagt 118697
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>dbj|AK025277.1| Homo sapiens cDNA: FLJ21624 fis, clone COL08006
          Length = 2350

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 98   agatcctccgctgcagatagt 118
            |||||||||||||||||||||
Sbjct: 2331 agatcctccgctgcagatagt 2311
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     gggagagaagcagcactgga 56
              ||||||||||||||||||||
Sbjct: 179946 gggagagaagcagcactgga 179965
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>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence
          Length = 114178

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   cggcggccatggcaatggcggcgg 216
             |||||||||||||||| |||||||
Sbjct: 37561 cggcggccatggcaatcgcggcgg 37584
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>gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, complete sequence
          Length = 203423

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   ccaattatcaggatatattagaaa 457
             |||||| |||||||||||||||||
Sbjct: 72337 ccaattgtcaggatatattagaaa 72360
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>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 189   tcgacggcggccatggcaatggcg 212
             ||||||||||| ||||||||||||
Sbjct: 44574 tcgacggcggcgatggcaatggcg 44551
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07,
              complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 189    tcgacggcggccatggcaatggcg 212
              ||||||||||| ||||||||||||
Sbjct: 111475 tcgacggcggcgatggcaatggcg 111452
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>gb|AC113305.7| Mus musculus chromosome 10, clone RP23-433H22, complete sequence
          Length = 203296

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 436   aattatcaggatatattagaaatg 459
             ||||| ||||||||||||||||||
Sbjct: 64043 aattaacaggatatattagaaatg 64020
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>gb|AC105325.11| Mus musculus chromosome 1, clone RP24-455G23, complete sequence
          Length = 139801

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    gggagagaagcagcactgga 56
             ||||||||||||||||||||
Sbjct: 18133 gggagagaagcagcactgga 18152
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     tgttgattggactgaggatg 425
               ||||||||||||||||||||
Sbjct: 4607028 tgttgattggactgaggatg 4607047
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>gb|AC158948.3| Mus musculus chromosome 1, clone RP24-263I3, complete sequence
          Length = 201046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 434   ccaattatcaggatatattagaaa 457
             |||||| |||||||||||||||||
Sbjct: 89663 ccaattgtcaggatatattagaaa 89640
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>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence
          Length = 207283

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     tgggagagaagcagcactgg 55
              ||||||||||||||||||||
Sbjct: 124643 tgggagagaagcagcactgg 124624
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 189     tcgacggcggccatggcaatggcg 212
               ||||||||||| ||||||||||||
Sbjct: 6740313 tcgacggcggcgatggcaatggcg 6740290
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>gb|AF541963.1| Glycine max cv Williams 82 BAC clone Gm_ISb001_091_F11, complete
             sequence
          Length = 118773

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cggccatggcaatggcggcg 215
             ||||||||||||||||||||
Sbjct: 71753 cggccatggcaatggcggcg 71734
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>ref|XM_315632.2| Anopheles gambiae str. PEST ENSANGP00000007272
           (ENSANGG00000005486), partial mRNA
          Length = 1622

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 308 gcgagcacttttgctaagtt 327
           ||||||||||||||||||||
Sbjct: 315 gcgagcacttttgctaagtt 296
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>gb|AC139382.3| Mus musculus BAC clone RP23-30B24 from 12, complete sequence
          Length = 180698

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    tgattggactgaggatgtag 428
              ||||||||||||||||||||
Sbjct: 124734 tgattggactgaggatgtag 124715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,188,685
Number of Sequences: 3902068
Number of extensions: 3188685
Number of successful extensions: 69138
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68755
Number of HSP's gapped (non-prelim): 383
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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