ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl50b03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full insert sequence Length = 3325 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 5 acattccagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcg 64 |||||||| || |||||||| ||||||| || | ||||| ||||| || || |||||| Sbjct: 2774 acattccaatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcg 2833 Query: 65 ctaaatatggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaac 124 || ||||||||||||| | | || | ||| |||||| || |||||| | ||||||| | Sbjct: 2834 ttatatatggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagc 2893 Query: 125 aaaagccatgggaaatg 141 | ||||||||||||||| Sbjct: 2894 agaagccatgggaaatg 2910
>dbj|AK063754.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-A04, full insert sequence Length = 577 Score = 58.0 bits (29), Expect = 2e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 5 acattccagtcccttggtcagtctcaaaaccaaaccatgcggtctgaatctgcggcctcg 64 |||||||| || |||||||| ||||||| || | ||||| ||||| || || |||||| Sbjct: 349 acattccaatctcttggtcaagctcaaaatcatgctatgcgatctgattccgcagcctcg 408 Query: 65 ctaaatatggatgatcaagcagcttcaaactgcaagctggcgagaaggacttcagtgaac 124 || ||||||||||||| | | || | ||| |||||| || |||||| | ||||||| | Sbjct: 409 ttatatatggatgatcatgtaactcctaaccacaagctcgccagaagggcatcagtgagc 468 Query: 125 aaaagccatgggaaatg 141 | ||||||||||||||| Sbjct: 469 agaagccatgggaaatg 485
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 97 caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 141 |||||| || |||||| | ||||||| || ||||||||||||||| Sbjct: 32288283 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 32288239
>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17, complete sequence Length = 103614 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 70944 cagtgattttactgtctttat 70924
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 97 caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 141 |||||| || |||||| | ||||||| || ||||||||||||||| Sbjct: 22050 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 22006
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gaagaaaacaagttaataatc 324 ||||||||||||||||||||| Sbjct: 38402 gaagaaaacaagttaataatc 38382
>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17 Contains the 3' part of a novel gene similar to KIAA0953, a novel gene similar to POMC (propiomelanocortin), a novel gene similar to FCN2 (ficolin 2), a novel gene similar to SNX9 (sorting nexin 9) and a CpG island, complete sequence Length = 167272 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 61172 cagtgattttactgtctttat 61152
>emb|AL645809.8| Mouse DNA sequence from clone RP23-402D13 on chromosome 11 Contains the 5' end of the Tisp78 gene for transcript increased in spermiogenesis 78, the Epn3 gene for epsin 3, the Mycbpap gene for mycbp associated protein, the gene for a novel protein (B430319G23Rik), the 5' end of the gene for a novel protein (9330162N21Rik) and the Chad gene for chondroadherin, complete sequence Length = 106815 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cagtcccttggtcagtctcaa 31 ||||||||||||||||||||| Sbjct: 66685 cagtcccttggtcagtctcaa 66705
>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8, complete sequence Length = 3967 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 3054 cagtgattttactgtctttat 3034
>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14, complete sequence Length = 160419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 142321 cagtgattttactgtctttat 142341
>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24, complete sequence Length = 75984 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 70209 cagtgattttactgtctttat 70189
>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2, complete sequence Length = 173100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 19058 cagtgattttactgtctttat 19038
>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5, complete sequence Length = 81891 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 26235 cagtgattttactgtctttat 26255
>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8, complete sequence Length = 216373 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 1141 cagtgattttactgtctttat 1121
>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence Length = 135717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 2990 cagtgattttactgtctttat 3010
>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3, complete sequence Length = 103014 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 49569 cagtgattttactgtctttat 49549
>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19, complete sequence Length = 230267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 224457 cagtgattttactgtctttat 224437
>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence Length = 161452 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 atttacatgcagtgctgctgc 262 ||||||||||||||||||||| Sbjct: 144602 atttacatgcagtgctgctgc 144622
>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10, complete sequence Length = 179798 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 32657 cagtgattttactgtctttat 32637
>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence Length = 122102 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 242 atttacatgcagtgctgctgc 262 ||||||||||||||||||||| Sbjct: 47251 atttacatgcagtgctgctgc 47231
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 97 caagctggcgagaaggacttcagtgaacaaaagccatgggaaatg 141 |||||| || |||||| | ||||||| || ||||||||||||||| Sbjct: 32378793 caagctcgccagaagggcatcagtgagcagaagccatgggaaatg 32378749
>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1, complete sequence Length = 171618 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 153933 cagtgattttactgtctttat 153913
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 gaagaaaacaagttaataatc 324 ||||||||||||||||||||| Sbjct: 40191 gaagaaaacaagttaataatc 40171
>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete sequence Length = 169530 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 116704 cagtgattttactgtctttat 116724
>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14, complete sequence Length = 195499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 117952 cagtgattttactgtctttat 117972
>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17, complete sequence Length = 187548 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 5771 cagtgattttactgtctttat 5751
>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete sequence Length = 190793 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 181360 cagtgattttactgtctttat 181340
>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence Length = 231581 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 4737 cagtgattttactgtctttat 4717
>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence Length = 72631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 11866 cagtgattttactgtctttat 11886
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence Length = 203360 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 155642 cagtgattttactgtctttat 155662
>gb|AC124180.5| Mus musculus BAC clone RP23-200I16 from 16, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 gaacaaaagccatgggaaatg 141 ||||||||||||||||||||| Sbjct: 70617 gaacaaaagccatgggaaatg 70597
>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence Length = 69315 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtctttat 415 ||||||||||||||||||||| Sbjct: 30457 cagtgattttactgtctttat 30437
>gb|AC167240.5| Mus musculus BAC clone RP24-548A13 from chromosome 7, complete sequence Length = 218177 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gccaagttctccagattggc 227 |||||||||||||||||||| Sbjct: 181023 gccaagttctccagattggc 181004
>gb|AC123060.4| Mus musculus chromosome 6 clone RP23-214M22, complete sequence Length = 210248 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 32773 ccacctgcttcccaaacatg 32754
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 190645 ccacctgcttcccaaacatg 190626
>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome Length = 110907 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 ttccagtgattttactgtctttat 415 |||||||||||||||| ||||||| Sbjct: 46466 ttccagtgattttactctctttat 46489
>ref|NM_133927.1| Mus musculus integrin alpha FG-GAP repeat containing 2 (Itfg2), mRNA Length = 2314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 2095 ccacctgcttcccaaacatg 2114
>emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 in linkage group 11, complete sequence Length = 88152 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 25126 cagtgattttactgtcttta 25107
>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21, complete sequence Length = 131428 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 61125 agtgattttactgtctttat 61144
>gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome 8, complete sequence Length = 189469 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 397 gtgattttactgtctttatatccgaaga 424 ||||||||||||| |||||||| ||||| Sbjct: 40839 gtgattttactgtgtttatatcagaaga 40812
>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14, complete sequence Length = 160671 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 123596 cagtgattttactgtcttta 123615
>emb|X74443.2|RVNUCPROA Peste-des-petits-ruminants virus complete genome Length = 15948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tgatacattccagtcccttg 20 |||||||||||||||||||| Sbjct: 1855 tgatacattccagtcccttg 1836
>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13, complete sequence Length = 206656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 87225 agtgattttactgtctttat 87206
>emb|Z97629.1|HS128N22 Human DNA sequence from clone RP1-128N22 on chromosome Xq25-26.3, complete sequence Length = 98902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 aaggacttcagtgaacaaaa 128 |||||||||||||||||||| Sbjct: 87979 aaggacttcagtgaacaaaa 87998
>gb|BC025492.1| Mus musculus integrin alpha FG-GAP repeat containing 2, mRNA (cDNA clone MGC:36400 IMAGE:5309950), complete cds Length = 2312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 2102 ccacctgcttcccaaacatg 2121
>gb|BC014833.1| Mus musculus integrin alpha FG-GAP repeat containing 2, mRNA (cDNA clone MGC:25499 IMAGE:4507661), complete cds Length = 2314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 2095 ccacctgcttcccaaacatg 2114
>emb|AL354920.21| Human DNA sequence from clone RP11-522I20 on chromosome 9 Contains a novel gene, the UBQLN1 gene for ubiquilin 1 (DA41, DSK2, XDRP1, PLIC-1), the 3' UTR of the gene for protein kinase anchoring protein GKAP42 (FKSG21) and two CpG islands, complete sequence Length = 168804 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcagtctcaaaaccaaacca 41 |||||||||||||||||||| Sbjct: 147754 tcagtctcaaaaccaaacca 147735
>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14, complete sequence Length = 110290 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 33502 agtgattttactgtctttat 33521
>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete sequence Length = 185915 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 117960 cagtgattttactgtcttta 117941
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tgcagtgctgctgcctgctg 268 |||||||||||||||||||| Sbjct: 114332 tgcagtgctgctgcctgctg 114351
>emb|AJ298897.2|PDE298897 Peste-des-petits-ruminants virus mRNA for phosphoprotein (p gene) Length = 1655 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 tgatacattccagtcccttg 20 |||||||||||||||||||| Sbjct: 108 tgatacattccagtcccttg 89
>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13, complete sequence Length = 118999 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 64547 agtgattttactgtctttat 64528
>emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in linkage group 4, complete sequence Length = 138906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 110053 cagtgattttactgtcttta 110034
>emb|CR354535.11| Zebrafish DNA sequence from clone CH211-199M16 in linkage group 25, complete sequence Length = 225139 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cacctgcttcccaaacatgcatgg 201 ||||||||||||||||||| |||| Sbjct: 88395 cacctgcttcccaaacatggatgg 88372
>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5, complete sequence Length = 142808 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 58124 agtgattttactgtctttat 58143
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete sequence Length = 219065 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 140959 agtgattttactgtctttat 140978
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete sequence Length = 220671 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 161643 cagtgattttactgtcttta 161662
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19, complete sequence Length = 182432 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 3783 cagtgattttactgtcttta 3802
>emb|BX294110.8| Zebrafish DNA sequence from clone DKEYP-19H3 in linkage group 25, complete sequence Length = 176023 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cacctgcttcccaaacatgcatgg 201 ||||||||||||||||||| |||| Sbjct: 131018 cacctgcttcccaaacatggatgg 131041
>emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in linkage group 5, complete sequence Length = 186721 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 130009 agtgattttactgtctttat 130028
>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence Length = 244779 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 205227 agtgattttactgtctttat 205246
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 161131 agtgattttactgtctttat 161112
>emb|CR590856.1| full-length cDNA clone CS0DF019YB20 of Fetal brain of Homo sapiens (human) Length = 1576 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 94 ctgcaagctggcgagaaggacttcagtg 121 ||||||||||| ||||||| |||||||| Sbjct: 1200 ctgcaagctggggagaaggtcttcagtg 1173
>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16, complete sequence Length = 92059 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 3008 agtgattttactgtctttat 2989
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence Length = 177312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 96391 agtgattttactgtctttat 96372
>dbj|AK134630.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330505C02 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 2317 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 2114 ccacctgcttcccaaacatg 2133
>dbj|AK147728.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270009J17 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 2127 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 2096 ccacctgcttcccaaacatg 2115
>dbj|AK159637.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026L14 product:Uncharacterized hematopoietic stem/progenitor cells protein MDS028 homolog [Homo sapiens], full insert sequence Length = 3185 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ccacctgcttcccaaacatg 196 |||||||||||||||||||| Sbjct: 3070 ccacctgcttcccaaacatg 3089
>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11, complete sequence Length = 211986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 107515 agtgattttactgtctttat 107534
>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16, complete sequence Length = 256605 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 98586 cagtgattttactgtcttta 98567
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 57124 agtgattttactgtctttat 57143
>gb|AC159005.3| Mus musculus BAC clone RP23-67F4 from chromosome 7, complete sequence Length = 230018 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gccaagttctccagattggc 227 |||||||||||||||||||| Sbjct: 12693 gccaagttctccagattggc 12674
>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16, complete sequence Length = 191052 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 103848 cagtgattttactgtcttta 103829
>ref|XM_393050.2| PREDICTED: Apis mellifera similar to importin alpha S2 (LOC409543), mRNA Length = 1986 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 caagcagcttcaaactgcaa 99 |||||||||||||||||||| Sbjct: 564 caagcagcttcaaactgcaa 545
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 tgcagtgctgctgcctgctg 268 |||||||||||||||||||| Sbjct: 20867507 tgcagtgctgctgcctgctg 20867526
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 tgcagtgctgctgcctgctg 268 |||||||||||||||||||| Sbjct: 17439040 tgcagtgctgctgcctgctg 17439021
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5, complete sequence Length = 160041 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 24154 cagtgattttactgtcttta 24135
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4, complete sequence Length = 211817 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 52868 agtgattttactgtctttat 52887
>emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in linkage group 22, complete sequence Length = 184512 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 22659 agtgattttactgtctttat 22678
>emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in linkage group 2, complete sequence Length = 194313 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 77783 agtgattttactgtctttat 77764
>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12, complete sequence Length = 177468 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 160927 agtgattttactgtctttat 160908
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 tgcagtgctgctgcctgctg 268 |||||||||||||||||||| Sbjct: 51037 tgcagtgctgctgcctgctg 51018
>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19, complete sequence Length = 104035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 9200 agtgattttactgtctttat 9219
>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence Length = 198627 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 12918 agtgattttactgtctttat 12937
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence Length = 267826 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 265373 agtgattttactgtctttat 265392
>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19, complete sequence Length = 175656 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 3214 agtgattttactgtctttat 3195
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4, complete sequence Length = 127818 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 17196 agtgattttactgtctttat 17215
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4, complete sequence Length = 228177 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 158988 agtgattttactgtctttat 158969
>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete sequence Length = 231807 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 155794 agtgattttactgtctttat 155813
>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18, complete sequence Length = 188895 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 105673 agtgattttactgtctttat 105654
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 214688 agtgattttactgtctttat 214669
>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19, complete sequence Length = 190702 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 99216 cagtgattttactgtcttta 99197
>emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in linkage group 11, complete sequence Length = 90503 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 33475 agtgattttactgtctttat 33456
>emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in linkage group 23, complete sequence Length = 89377 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 26757 agtgattttactgtctttat 26738
>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence Length = 182526 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 135864 agtgattttactgtctttat 135883
>emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in linkage group 5, complete sequence Length = 82272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 76637 agtgattttactgtctttat 76618
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete sequences Length = 211652 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 94 ctgcaagctggcgagaaggacttcagtg 121 ||||||||||| ||||||| |||||||| Sbjct: 71594 ctgcaagctggggagaaggtcttcagtg 71621
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 158672 agtgattttactgtctttat 158653
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 167149 cagtgattttactgtcttta 167130
>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16, complete sequence Length = 180576 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 20553 agtgattttactgtctttat 20534
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18, complete sequence Length = 152902 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 122507 cagtgattttactgtcttta 122488
>emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in linkage group 16, complete sequence Length = 237124 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 67450 cagtgattttactgtcttta 67469
>emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, complete sequence Length = 24458 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 cagtgattttactgtcttta 414 |||||||||||||||||||| Sbjct: 20945 cagtgattttactgtcttta 20964
>emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, complete sequence Length = 169046 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 agtgattttactgtctttat 415 |||||||||||||||||||| Sbjct: 126168 agtgattttactgtctttat 126149
>gb|L25338.1|MUSFBP Mus musculus folate-binding protein gene, 5' end Length = 1565 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 gccaagttctccagattggc 227 |||||||||||||||||||| Sbjct: 601 gccaagttctccagattggc 582 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,092,822 Number of Sequences: 3902068 Number of extensions: 4092822 Number of successful extensions: 84650 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84259 Number of HSP's gapped (non-prelim): 389 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
